RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 SEMA6CQ9H3T2 930 aa9.06□□□□□ -0.96
ATG3-204ENST00000467275 PLCB3Q01970 1234 aa9.05□□□□□ -0.96
ATG3-204ENST00000467275 PPP2R3AQ06190 1150 aa9.05□□□□□ -0.96
ATG3-204ENST00000467275 BCO2Q9BYV7 579 aa9.05□□□□□ -0.96
ATG3-204ENST00000467275 ACSS3Q9H6R3 686 aa9.05□□□□□ -0.96
ATG3-204ENST00000467275 GPN3Q9UHW5 284 aaPredicted RBP9.05□□□□□ -0.96
ATG3-204ENST00000467275 CYP26A1O43174 497 aa9.04□□□□□ -0.96
ATG3-204ENST00000467275 LIG1P18858 919 aa9.04□□□□□ -0.96
ATG3-204ENST00000467275 HNRNPUQ00839 825 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATG3-204ENST00000467275 DUSP27Q5VZP5 1158 aa9.04□□□□□ -0.96
ATG3-204ENST00000467275 DAGLAQ9Y4D2 1042 aa9.04□□□□□ -0.96
ATG3-204ENST00000467275 PNMA6FA0A0J9YX94 578 aa9.03□□□□□ -0.96
ATG3-204ENST00000467275 FAM170BA6NMN3 283 aa9.03□□□□□ -0.96
ATG3-204ENST00000467275 SLFN14P0C7P3 912 aa9.03□□□□□ -0.96
ATG3-204ENST00000467275 XRCC5P13010 732 aaKnown RBP9.03□□□□□ -0.96
ATG3-204ENST00000467275 GSX1Q9H4S2 264 aaPredicted RBP9.03□□□□□ -0.96
ATG3-204ENST00000467275 CCDC86Q9H6F5 360 aaKnown RBP9.03□□□□□ -0.96
ATG3-204ENST00000467275 TMEM39AQ9NV64 488 aa9.03□□□□□ -0.96
ATG3-204ENST00000467275 PPP1R9AQ9ULJ8 1098 aa9.03□□□□□ -0.96
ATG3-204ENST00000467275 ANGEL1Q9UNK9 670 aaKnown RBP9.03□□□□□ -0.96
ATG3-204ENST00000467275 SYNGAP1Q96PV0 1343 aa9.03□□□□□ -0.96
ATG3-204ENST00000467275 COL17A1Q9UMD9 1497 aaPredicted RBP9.02□□□□□ -0.96
ATG3-204ENST00000467275 GSTP1P09211 210 aaKnown RBP9.02□□□□□ -0.97
ATG3-204ENST00000467275 CYP27A1Q02318 531 aa9.02□□□□□ -0.97
ATG3-204ENST00000467275 DSC3Q14574 896 aa9.02□□□□□ -0.97
ATG3-204ENST00000467275 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.02□□□□□ -0.97
ATG3-204ENST00000467275 GATA6Q92908 595 aa9.02□□□□□ -0.97
ATG3-204ENST00000467275 WDR89Q96FK6 387 aaPredicted RBP9.02□□□□□ -0.97
ATG3-204ENST00000467275 LGR6Q9HBX8 967 aa9.02□□□□□ -0.97
ATG3-204ENST00000467275 AKAP2Q9Y2D5 859 aa9.02□□□□□ -0.97
ATG3-204ENST00000467275 TREHO43280 583 aa9.01□□□□□ -0.97
ATG3-204ENST00000467275 MSMPQ1L6U9 139 aa9.01□□□□□ -0.97
ATG3-204ENST00000467275 PIDD1Q9HB75 910 aa9.01□□□□□ -0.97
ATG3-204ENST00000467275 TMPRSS2O15393 492 aa9□□□□□ -0.97
ATG3-204ENST00000467275 ID3Q02535 119 aa9□□□□□ -0.97
ATG3-204ENST00000467275 ENOX2Q16206 610 aaKnown RBP9□□□□□ -0.97
ATG3-204ENST00000467275 NXPE4Q6UWF7 544 aa9□□□□□ -0.97
ATG3-204ENST00000467275 ZNF765Q7L2R6 523 aa9□□□□□ -0.97
ATG3-204ENST00000467275 KCNB2Q92953 911 aa9□□□□□ -0.97
ATG3-204ENST00000467275 LRRC4CQ9HCJ2 640 aa9□□□□□ -0.97
ATG3-204ENST00000467275 KRT82Q9NSB4 513 aa9□□□□□ -0.97
ATG3-204ENST00000467275 ZNF862O60290 1169 aa8.99□□□□□ -0.97
ATG3-204ENST00000467275 ZSCAN29Q8IWY8 852 aaPredicted RBP8.99□□□□□ -0.97
ATG3-204ENST00000467275 ATXN3LQ9H3M9 355 aa8.99□□□□□ -0.97
ATG3-204ENST00000467275 CRIM1Q9NZV1 1036 aa8.99□□□□□ -0.97
ATG3-204ENST00000467275 IVNS1ABPQ9Y6Y0 642 aa8.99□□□□□ -0.97
ATG3-204ENST00000467275 DYNC1LI2O43237 492 aaPredicted RBP8.98□□□□□ -0.97
ATG3-204ENST00000467275 PAX4O43316 350 aa8.98□□□□□ -0.97
ATG3-204ENST00000467275 TAL1P17542 331 aaPredicted RBP8.98□□□□□ -0.97
ATG3-204ENST00000467275 MAPK8P45983 427 aa8.98□□□□□ -0.97
ATG3-204ENST00000467275 SEZ6L2Q6UXD5 910 aa8.98□□□□□ -0.97
ATG3-204ENST00000467275 FANCD2OSQ96PS1 177 aa8.98□□□□□ -0.97
ATG3-204ENST00000467275 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
ATG3-204ENST00000467275 C1GALT1Q9NS00 363 aa8.98□□□□□ -0.97
ATG3-204ENST00000467275 BSDC1Q9NW68 430 aaPredicted RBP8.98□□□□□ -0.97
ATG3-204ENST00000467275 CCDC39Q9UFE4 941 aa8.98□□□□□ -0.97
ATG3-204ENST00000467275 KIF4BQ2VIQ3 1234 aa8.97□□□□□ -0.97
ATG3-204ENST00000467275 VSIG10LQ86VR7 867 aa8.97□□□□□ -0.97
ATG3-204ENST00000467275 SULF2Q8IWU5 870 aa8.97□□□□□ -0.97
ATG3-204ENST00000467275 PRNPP04156 253 aa8.96□□□□□ -0.98
ATG3-204ENST00000467275 ARNTP27540 789 aa8.96□□□□□ -0.98
ATG3-204ENST00000467275 OGFOD3Q6PK18 319 aa8.96□□□□□ -0.98
ATG3-204ENST00000467275 PDZD3Q86UT5 571 aa8.96□□□□□ -0.98
ATG3-204ENST00000467275 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.95□□□□□ -0.98
ATG3-204ENST00000467275 RNGTTO60942 597 aaKnown RBP8.95□□□□□ -0.98
ATG3-204ENST00000467275 KCNA1Q09470 495 aa8.95□□□□□ -0.98
ATG3-204ENST00000467275 CYP27C1Q4G0S4 372 aa8.95□□□□□ -0.98
ATG3-204ENST00000467275 TP53INP2Q8IXH6 220 aa8.95□□□□□ -0.98
ATG3-204ENST00000467275 SMYD4Q8IYR2 804 aaPredicted RBP8.95□□□□□ -0.98
ATG3-204ENST00000467275 FBF1Q8TES7 1133 aa8.95□□□□□ -0.98
ATG3-204ENST00000467275 FBXL18Q96ME1 805 aa8.95□□□□□ -0.98
ATG3-204ENST00000467275 EMILIN2Q9BXX0 1053 aa8.95□□□□□ -0.98
ATG3-204ENST00000467275 CBX8Q9HC52 389 aa8.95□□□□□ -0.98
ATG3-204ENST00000467275 DISC1Q9NRI5 854 aa8.95□□□□□ -0.98
ATG3-204ENST00000467275 NME2P22392 152 aa8.94□□□□□ -0.98
ATG3-204ENST00000467275 GSTT1P30711 240 aa8.94□□□□□ -0.98
ATG3-204ENST00000467275 TTLL4Q14679 1199 aa8.94□□□□□ -0.98
ATG3-204ENST00000467275 MAP1SQ66K74 1059 aaPredicted RBP8.94□□□□□ -0.98
ATG3-204ENST00000467275 ABI1Q8IZP0 508 aa8.94□□□□□ -0.98
ATG3-204ENST00000467275 STK35Q8TDR2 534 aa8.94□□□□□ -0.98
ATG3-204ENST00000467275 ZC3H7BQ9UGR2 993 aaKnown RBP8.94□□□□□ -0.98
ATG3-204ENST00000467275 PCDHGC5Q9Y5F6 944 aa8.94□□□□□ -0.98
ATG3-204ENST00000467275 KRTAP9-6A0A140TA67 174 aa8.93□□□□□ -0.98
ATG3-204ENST00000467275 HCLS1P14317 486 aaPredicted RBP8.93□□□□□ -0.98
ATG3-204ENST00000467275 CDK5R2Q13319 367 aa8.93□□□□□ -0.98
ATG3-204ENST00000467275 C3orf58Q8NDZ4 430 aa8.93□□□□□ -0.98
ATG3-204ENST00000467275 ACSBG1Q96GR2 724 aa8.93□□□□□ -0.98
ATG3-204ENST00000467275 ASB16Q96NS5 453 aa8.93□□□□□ -0.98
ATG3-204ENST00000467275 SRCIN1Q9C0H9 1055 aa8.93□□□□□ -0.98
ATG3-204ENST00000467275 ADGRE2Q9UHX3 823 aa8.93□□□□□ -0.98
ATG3-204ENST00000467275 ATP2B2Q01814 1243 aa8.92□□□□□ -0.98
ATG3-204ENST00000467275 FMR1Q06787 632 aaKnown RBP eCLIP8.92□□□□□ -0.98
ATG3-204ENST00000467275 ALG1LQ6GMV1 187 aa8.92□□□□□ -0.98
ATG3-204ENST00000467275 TPTE2Q6XPS3 522 aa8.92□□□□□ -0.98
ATG3-204ENST00000467275 FLCNQ8NFG4 579 aa8.92□□□□□ -0.98
ATG3-204ENST00000467275 NECAB3Q96P71 396 aaPredicted RBP8.92□□□□□ -0.98
ATG3-204ENST00000467275 SSU72Q9NP77 194 aaKnown RBP8.92□□□□□ -0.98
ATG3-204ENST00000467275 PCOLCE2Q9UKZ9 415 aa8.92□□□□□ -0.98
ATG3-204ENST00000467275 FAM87AP0C7U9 286 aa8.91□□□□□ -0.98
ATG3-204ENST00000467275 GPBAR1Q8TDU6 330 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms