RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 RC3H1Q5TC82 1133 aaKnown RBP13.36□□□□□ -0.27
HPS1-208ENST00000467246 MICU3Q86XE3 530 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 ZNF396Q96N95 335 aaPredicted RBP13.36□□□□□ -0.27
HPS1-208ENST00000467246 AIFM3Q96NN9 605 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 MYL10Q9BUA6 226 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 LY9Q9HBG7 655 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 PNPLA7Q6ZV29 1317 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 MSNP26038 577 aaKnown RBP13.35□□□□□ -0.27
HPS1-208ENST00000467246 TYRO3Q06418 890 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 NBPF5PQ86XG9 351 aaPredicted RBP13.35□□□□□ -0.27
HPS1-208ENST00000467246 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 MPNDQ8N594 471 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 TMEM87BQ96K49 555 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 FAM84BQ96KN1 310 aaPredicted RBP13.35□□□□□ -0.27
HPS1-208ENST00000467246 COL1A1P02452 1464 aaPredicted RBP13.35□□□□□ -0.27
HPS1-208ENST00000467246 ZPR1O75312 459 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 ADCY5O95622 1261 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 KLRK1P26718 216 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 TMEM67Q5HYA8 995 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 AKNAD1Q5T1N1 836 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 RAI14Q9P0K7 980 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 MRVI1Q9Y6F6 885 aa13.35□□□□□ -0.27
HPS1-208ENST00000467246 AP5Z1O43299 807 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 RRP12Q5JTH9 1297 aaKnown RBP13.34□□□□□ -0.27
HPS1-208ENST00000467246 NFXL1Q6ZNB6 911 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 RBM43Q6ZSC3 357 aaKnown RBP13.34□□□□□ -0.27
HPS1-208ENST00000467246 MFSD6Q6ZSS7 791 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 VPS37DQ86XT2 251 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
HPS1-208ENST00000467246 SDR42E1Q8WUS8 393 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 PHKBQ93100 1093 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 NACAP1Q9BZK3 213 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 GOLPH3LQ9H4A5 285 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 GNL3LQ9NVN8 582 aaKnown RBP13.34□□□□□ -0.27
HPS1-208ENST00000467246 CCDC39Q9UFE4 941 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
HPS1-208ENST00000467246 GNAT2P19087 354 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
HPS1-208ENST00000467246 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 CAVIN4Q5BKX8 364 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 ATL3Q6DD88 541 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
HPS1-208ENST00000467246 NLRP3Q96P20 1036 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 ZKSCAN3Q9BRR0 538 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 TOMM22Q9NS69 142 aa13.34□□□□□ -0.27
HPS1-208ENST00000467246 RTCBQ9Y3I0 505 aaKnown RBP13.34□□□□□ -0.27
HPS1-208ENST00000467246 KIF28PB7ZC32 967 aa13.33□□□□□ -0.27
HPS1-208ENST00000467246 SMIM22K7EJ46 135 aa13.33□□□□□ -0.27
HPS1-208ENST00000467246 ZBTB43O43298 467 aa13.33□□□□□ -0.27
HPS1-208ENST00000467246 ME1P48163 572 aa13.33□□□□□ -0.27
HPS1-208ENST00000467246 SGMS1Q86VZ5 419 aa13.33□□□□□ -0.27
HPS1-208ENST00000467246 NYXQ9GZU5 481 aa13.33□□□□□ -0.27
HPS1-208ENST00000467246 FAM217BQ9NTX9 383 aaPredicted RBP13.33□□□□□ -0.27
HPS1-208ENST00000467246 FAM13BQ9NYF5 915 aa13.33□□□□□ -0.27
HPS1-208ENST00000467246 PTMAP06454 111 aaKnown RBP13.33□□□□□ -0.28
HPS1-208ENST00000467246 ZKSCAN5Q9Y2L8 839 aa13.33□□□□□ -0.28
HPS1-208ENST00000467246 CLIC4Q9Y696 253 aa13.33□□□□□ -0.28
HPS1-208ENST00000467246 BTAF1O14981 1849 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 UBE2Q2LH0YL09 131 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 RGL2O15211 777 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 NTRK3Q16288 839 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 TPTE2Q6XPS3 522 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 CNNM2Q9H8M5 875 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 MYH15Q9Y2K3 1946 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 MAGEB6P1A0A0J9YX57 407 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 LIFRP42702 1097 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 SNW1Q13573 536 aaKnown RBP13.32□□□□□ -0.28
HPS1-208ENST00000467246 ANO6Q4KMQ2 910 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 FAM200AQ8TCP9 573 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 STAG1Q8WVM7 1258 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 ALG1Q9BT22 464 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 KRT23Q9C075 422 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 RTEL1Q9NZ71 1219 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 PCDHA7Q9UN72 937 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 SLC12A7Q9Y666 1083 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 SCN7AQ01118 1682 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 C4AP0C0L4 1744 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
HPS1-208ENST00000467246 GOLGA8AA7E2F4 631 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 MINDY4BA8MYZ0 360 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 RANBP6O60518 1105 aaKnown RBP13.32□□□□□ -0.28
HPS1-208ENST00000467246 DYNLL1P63167 89 aaKnown RBP13.32□□□□□ -0.28
HPS1-208ENST00000467246 KIF23Q02241 960 aaPredicted RBP13.32□□□□□ -0.28
HPS1-208ENST00000467246 MYSM1Q5VVJ2 828 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 LUZP1Q86V48 1076 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 RIOK1Q9BRS2 568 aaKnown RBP13.32□□□□□ -0.28
HPS1-208ENST00000467246 TFCP2L1Q9NZI6 479 aa13.32□□□□□ -0.28
HPS1-208ENST00000467246 PPARAQ07869 468 aa13.31□□□□□ -0.28
HPS1-208ENST00000467246 FBXO33Q7Z6M2 555 aa13.31□□□□□ -0.28
HPS1-208ENST00000467246 LINC00301Q8NCQ3 95 aa13.31□□□□□ -0.28
HPS1-208ENST00000467246 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
HPS1-208ENST00000467246 CCDC69A6NI79 296 aa13.31□□□□□ -0.28
HPS1-208ENST00000467246 SLC51AQ86UW1 340 aa13.31□□□□□ -0.28
HPS1-208ENST00000467246 FSIP1Q8NA03 581 aa13.31□□□□□ -0.28
HPS1-208ENST00000467246 ENGASEQ8NFI3 743 aa13.31□□□□□ -0.28
HPS1-208ENST00000467246 CDKL5O76039 1030 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms