RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 ASPAP45381 313 aa8.57□□□□□ -1.04
PRPF40A-205ENST00000467114 PDE4CQ08493 712 aa8.57□□□□□ -1.04
PRPF40A-205ENST00000467114 NFXL1Q6ZNB6 911 aa8.57□□□□□ -1.04
PRPF40A-205ENST00000467114 GLIS3Q8NEA6 775 aa8.57□□□□□ -1.04
PRPF40A-205ENST00000467114 CSRNP1Q96S65 589 aa8.57□□□□□ -1.04
PRPF40A-205ENST00000467114 TRAK1Q9UPV9 953 aa8.57□□□□□ -1.04
PRPF40A-205ENST00000467114 CYP27A1Q02318 531 aa8.56□□□□□ -1.04
PRPF40A-205ENST00000467114 GRM2Q14416 872 aa8.56□□□□□ -1.04
PRPF40A-205ENST00000467114 VSIG10LQ86VR7 867 aa8.56□□□□□ -1.04
PRPF40A-205ENST00000467114 ABI1Q8IZP0 508 aa8.56□□□□□ -1.04
PRPF40A-205ENST00000467114 CCER1Q8TC90 406 aaPredicted RBP8.56□□□□□ -1.04
PRPF40A-205ENST00000467114 TMC1Q8TDI8 760 aa8.56□□□□□ -1.04
PRPF40A-205ENST00000467114 C1GALT1Q9NS00 363 aa8.56□□□□□ -1.04
PRPF40A-205ENST00000467114 BSDC1Q9NW68 430 aaPredicted RBP8.56□□□□□ -1.04
PRPF40A-205ENST00000467114 GADD45BO75293 160 aaPredicted RBP8.55□□□□□ -1.04
PRPF40A-205ENST00000467114 FAAP100Q0VG06 881 aa8.55□□□□□ -1.04
PRPF40A-205ENST00000467114 PDE3AQ14432 1141 aa8.55□□□□□ -1.04
PRPF40A-205ENST00000467114 DUSP27Q5VZP5 1158 aa8.55□□□□□ -1.04
PRPF40A-205ENST00000467114 FBXL18Q96ME1 805 aa8.55□□□□□ -1.04
PRPF40A-205ENST00000467114 PPP1R9AQ9ULJ8 1098 aa8.55□□□□□ -1.04
PRPF40A-205ENST00000467114 ZNF765Q7L2R6 523 aa8.54□□□□□ -1.04
PRPF40A-205ENST00000467114 EPS8L3Q8TE67 593 aaKnown RBP8.54□□□□□ -1.04
PRPF40A-205ENST00000467114 TMPRSS2O15393 492 aa8.53□□□□□ -1.04
PRPF40A-205ENST00000467114 DYNC1LI2O43237 492 aaPredicted RBP8.53□□□□□ -1.04
PRPF40A-205ENST00000467114 CCDC86Q9H6F5 360 aaKnown RBP8.53□□□□□ -1.04
PRPF40A-205ENST00000467114 CRIM1Q9NZV1 1036 aa8.53□□□□□ -1.04
PRPF40A-205ENST00000467114 SOWAHDA6NJG2 315 aa8.52□□□□□ -1.05
PRPF40A-205ENST00000467114 OGFOD3Q6PK18 319 aa8.52□□□□□ -1.05
PRPF40A-205ENST00000467114 CBLL1Q75N03 491 aa8.52□□□□□ -1.05
PRPF40A-205ENST00000467114 WDR89Q96FK6 387 aaPredicted RBP8.52□□□□□ -1.05
PRPF40A-205ENST00000467114 ZC3H7BQ9UGR2 993 aaKnown RBP8.52□□□□□ -1.05
PRPF40A-205ENST00000467114 DAGLAQ9Y4D2 1042 aa8.52□□□□□ -1.05
PRPF40A-205ENST00000467114 RNF114Q9Y508 228 aa8.52□□□□□ -1.05
PRPF40A-205ENST00000467114 LIG1P18858 919 aa8.51□□□□□ -1.05
PRPF40A-205ENST00000467114 ZNF157P51786 506 aaPredicted RBP8.51□□□□□ -1.05
PRPF40A-205ENST00000467114 KRT82Q9NSB4 513 aa8.51□□□□□ -1.05
PRPF40A-205ENST00000467114 ZNF862O60290 1169 aa8.5□□□□□ -1.05
PRPF40A-205ENST00000467114 GSTP1P09211 210 aaKnown RBP8.5□□□□□ -1.05
PRPF40A-205ENST00000467114 SLFN14P0C7P3 912 aa8.5□□□□□ -1.05
PRPF40A-205ENST00000467114 KIF4BQ2VIQ3 1234 aa8.5□□□□□ -1.05
PRPF40A-205ENST00000467114 TMC7Q7Z402 723 aa8.5□□□□□ -1.05
PRPF40A-205ENST00000467114 FANCD2OSQ96PS1 177 aa8.5□□□□□ -1.05
PRPF40A-205ENST00000467114 TRAIPQ9BWF2 469 aa8.5□□□□□ -1.05
PRPF40A-205ENST00000467114 LRRC4CQ9HCJ2 640 aa8.5□□□□□ -1.05
PRPF40A-205ENST00000467114 GNEQ9Y223 722 aaKnown RBP8.5□□□□□ -1.05
PRPF40A-205ENST00000467114 PCDHGC5Q9Y5F6 944 aa8.5□□□□□ -1.05
PRPF40A-205ENST00000467114 XRCC5P13010 732 aaKnown RBP8.49□□□□□ -1.05
PRPF40A-205ENST00000467114 FCGRTP55899 365 aa8.49□□□□□ -1.05
PRPF40A-205ENST00000467114 COL19A1Q14993 1142 aa8.49□□□□□ -1.05
PRPF40A-205ENST00000467114 DTHD1Q6ZMT9 781 aa8.49□□□□□ -1.05
PRPF40A-205ENST00000467114 TP53INP2Q8IXH6 220 aa8.49□□□□□ -1.05
PRPF40A-205ENST00000467114 ATXN3LQ9H3M9 355 aa8.49□□□□□ -1.05
PRPF40A-205ENST00000467114 TMEM39AQ9NV64 488 aa8.49□□□□□ -1.05
PRPF40A-205ENST00000467114 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
PRPF40A-205ENST00000467114 PPP4R2Q9NY27 417 aa8.49□□□□□ -1.05
PRPF40A-205ENST00000467114 ID3Q02535 119 aa8.48□□□□□ -1.05
PRPF40A-205ENST00000467114 PPP2R3AQ06190 1150 aa8.48□□□□□ -1.05
PRPF40A-205ENST00000467114 PI16Q6UXB8 463 aa8.48□□□□□ -1.05
PRPF40A-205ENST00000467114 PDZD3Q86UT5 571 aa8.48□□□□□ -1.05
PRPF40A-205ENST00000467114 ZC3H12CQ9C0D7 883 aaKnown RBP8.48□□□□□ -1.05
PRPF40A-205ENST00000467114 PAK6Q9NQU5 681 aaPredicted RBP8.48□□□□□ -1.05
PRPF40A-205ENST00000467114 DISC1Q9NRI5 854 aa8.48□□□□□ -1.05
PRPF40A-205ENST00000467114 DCTN4Q9UJW0 460 aa8.48□□□□□ -1.05
PRPF40A-205ENST00000467114 HNRNPUQ00839 825 aaKnown RBP eCLIP8.47□□□□□ -1.05
PRPF40A-205ENST00000467114 DSC3Q14574 896 aa8.47□□□□□ -1.05
PRPF40A-205ENST00000467114 AGBL5Q8NDL9 886 aa8.47□□□□□ -1.05
PRPF40A-205ENST00000467114 FLCNQ8NFG4 579 aa8.47□□□□□ -1.05
PRPF40A-205ENST00000467114 BCO2Q9BYV7 579 aa8.47□□□□□ -1.05
PRPF40A-205ENST00000467114 LGR6Q9HBX8 967 aa8.47□□□□□ -1.05
PRPF40A-205ENST00000467114 CYP27C1Q4G0S4 372 aa8.46□□□□□ -1.06
PRPF40A-205ENST00000467114 PIDD1Q9HB75 910 aa8.46□□□□□ -1.06
PRPF40A-205ENST00000467114 GPN3Q9UHW5 284 aaPredicted RBP8.46□□□□□ -1.06
PRPF40A-205ENST00000467114 SMYD4Q8IYR2 804 aaPredicted RBP8.45□□□□□ -1.06
PRPF40A-205ENST00000467114 TREHO43280 583 aa8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 ITGB5P18084 799 aa8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 CDK5R2Q13319 367 aa8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 ENOX2Q16206 610 aaKnown RBP8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 WFDC3Q8IUB2 231 aa8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 STK35Q8TDR2 534 aa8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 BCL7CQ8WUZ0 217 aaPredicted RBP8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 KRTAP9-9Q9BYP9 154 aa8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 KRTAP9-4Q9BYQ2 154 aa8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 BIN2Q9UBW5 565 aaPredicted RBP8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 SLC5A6Q9Y289 635 aa8.44□□□□□ -1.06
PRPF40A-205ENST00000467114 BTBD11A6QL63 1104 aa8.43□□□□□ -1.06
PRPF40A-205ENST00000467114 BRD1O95696 1058 aa8.43□□□□□ -1.06
PRPF40A-205ENST00000467114 YBX3P16989 372 aaKnown RBP eCLIP8.43□□□□□ -1.061e-8■■■■■ 47.2
PRPF40A-205ENST00000467114 PLCB3Q01970 1234 aa8.43□□□□□ -1.06
PRPF40A-205ENST00000467114 TTLL4Q14679 1199 aa8.43□□□□□ -1.06
PRPF40A-205ENST00000467114 SULF2Q8IWU5 870 aa8.43□□□□□ -1.06
PRPF40A-205ENST00000467114 STK11IPQ8N1F8 1099 aa8.43□□□□□ -1.06
PRPF40A-205ENST00000467114 KCNB2Q92953 911 aa8.43□□□□□ -1.06
PRPF40A-205ENST00000467114 PNMA6FA0A0J9YX94 578 aa8.42□□□□□ -1.06
PRPF40A-205ENST00000467114 FAM87AP0C7U9 286 aa8.42□□□□□ -1.06
PRPF40A-205ENST00000467114 ARNTP27540 789 aa8.42□□□□□ -1.06
PRPF40A-205ENST00000467114 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRPF40A-205ENST00000467114 NXPE4Q6UWF7 544 aa8.42□□□□□ -1.06
PRPF40A-205ENST00000467114 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
PRPF40A-205ENST00000467114 MISP3Q96FF7 219 aa8.42□□□□□ -1.06
PRPF40A-205ENST00000467114 PCOLCE2Q9UKZ9 415 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms