RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PEAR1Q5VY43 1037 aaPredicted RBP8.7□□□□□ -1.02
XRN1-206ENST00000467077 HRASLS5Q96KN8 279 aa8.7□□□□□ -1.02
XRN1-206ENST00000467077 KRTAP4-5Q9BYR2 181 aa8.7□□□□□ -1.02
XRN1-206ENST00000467077 GSX1Q9H4S2 264 aaPredicted RBP8.7□□□□□ -1.02
XRN1-206ENST00000467077 PIDD1Q9HB75 910 aa8.7□□□□□ -1.02
XRN1-206ENST00000467077 POLIQ9UNA4 740 aa8.7□□□□□ -1.02
XRN1-206ENST00000467077 RAP1GAPP47736 663 aa8.69□□□□□ -1.02
XRN1-206ENST00000467077 IFI16Q16666 785 aaKnown RBP8.69□□□□□ -1.02
XRN1-206ENST00000467077 ANGEL2Q5VTE6 544 aaKnown RBP8.69□□□□□ -1.02
XRN1-206ENST00000467077 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.68□□□□□ -1.02
XRN1-206ENST00000467077 ZNF865P0CJ78 1059 aaPredicted RBP8.68□□□□□ -1.02
XRN1-206ENST00000467077 USP5P45974 858 aa8.68□□□□□ -1.02
XRN1-206ENST00000467077 MESP2Q0VG99 397 aa8.68□□□□□ -1.02
XRN1-206ENST00000467077 ZSWIM9Q86XI8 627 aa8.68□□□□□ -1.02
XRN1-206ENST00000467077 PPP1R16BQ96T49 567 aa8.68□□□□□ -1.02
XRN1-206ENST00000467077 KRTAP9-7A8MTY7 169 aa8.67□□□□□ -1.02
XRN1-206ENST00000467077 AOC2O75106 756 aa8.67□□□□□ -1.02
XRN1-206ENST00000467077 CD96P40200 585 aa8.67□□□□□ -1.02
XRN1-206ENST00000467077 CDK5R2Q13319 367 aa8.67□□□□□ -1.02
XRN1-206ENST00000467077 KCNMB1Q16558 191 aa8.67□□□□□ -1.02
XRN1-206ENST00000467077 MLANAQ16655 118 aa8.67□□□□□ -1.02
XRN1-206ENST00000467077 AOC3Q16853 763 aa8.67□□□□□ -1.02
XRN1-206ENST00000467077 ZNF423Q2M1K9 1284 aa8.67□□□□□ -1.02
XRN1-206ENST00000467077 HNRNPUQ00839 825 aaKnown RBP eCLIP8.66□□□□□ -1.02
XRN1-206ENST00000467077 LILRA6Q6PI73 481 aa8.66□□□□□ -1.02
XRN1-206ENST00000467077 FLAD1Q8NFF5 587 aa8.66□□□□□ -1.02
XRN1-206ENST00000467077 LIN7BQ9HAP6 207 aa8.66□□□□□ -1.02
XRN1-206ENST00000467077 ECEL1O95672 775 aa8.65□□□□□ -1.02
XRN1-206ENST00000467077 CEACAM5P06731 702 aa8.65□□□□□ -1.02
XRN1-206ENST00000467077 SLC23A3Q6PIS1 610 aa8.65□□□□□ -1.02
XRN1-206ENST00000467077 TRIM56Q9BRZ2 755 aaKnown RBP8.65□□□□□ -1.02
XRN1-206ENST00000467077 WDR18Q9BV38 432 aa8.65□□□□□ -1.02
XRN1-206ENST00000467077 MKNK2Q9HBH9 465 aa8.65□□□□□ -1.02
XRN1-206ENST00000467077 TMEM265A0A087WTH1 108 aa8.64□□□□□ -1.03
XRN1-206ENST00000467077 TSPAN15O95858 294 aa8.64□□□□□ -1.03
XRN1-206ENST00000467077 CCNJLQ8IV13 435 aa8.64□□□□□ -1.03
XRN1-206ENST00000467077 SYNGAP1Q96PV0 1343 aa8.63□□□□□ -1.03
XRN1-206ENST00000467077 LRRC56Q8IYG6 542 aaPredicted RBP8.63□□□□□ -1.03
XRN1-206ENST00000467077 ATXN3LQ9H3M9 355 aa8.63□□□□□ -1.03
XRN1-206ENST00000467077 NCANO14594 1321 aa8.62□□□□□ -1.03
XRN1-206ENST00000467077 B3GALT4O96024 378 aa8.62□□□□□ -1.03
XRN1-206ENST00000467077 GRIA4P48058 902 aa8.62□□□□□ -1.03
XRN1-206ENST00000467077 AP3B2Q13367 1082 aa8.62□□□□□ -1.03
XRN1-206ENST00000467077 SPRED3Q2MJR0 410 aa8.62□□□□□ -1.03
XRN1-206ENST00000467077 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.62□□□□□ -1.03
XRN1-206ENST00000467077 PPP1R9AQ9ULJ8 1098 aa8.62□□□□□ -1.03
XRN1-206ENST00000467077 PRRG2O14669 202 aa8.61□□□□□ -1.03
XRN1-206ENST00000467077 TMPRSS2O15393 492 aa8.61□□□□□ -1.03
XRN1-206ENST00000467077 POLR3DP05423 398 aaPredicted RBP8.61□□□□□ -1.03
XRN1-206ENST00000467077 CFPP27918 469 aa8.61□□□□□ -1.03
XRN1-206ENST00000467077 ANKLE2Q86XL3 938 aa8.61□□□□□ -1.03
XRN1-206ENST00000467077 ZFYVE28Q9HCC9 887 aa8.61□□□□□ -1.03
XRN1-206ENST00000467077 B8ZZF3 427 aa8.6□□□□□ -1.03
XRN1-206ENST00000467077 LCE5AQ5TCM9 118 aa8.6□□□□□ -1.03
XRN1-206ENST00000467077 SMYD4Q8IYR2 804 aaPredicted RBP8.6□□□□□ -1.03
XRN1-206ENST00000467077 GTF3C2Q8WUA4 911 aaPredicted RBP8.6□□□□□ -1.03
XRN1-206ENST00000467077 SLAIN2Q9P270 581 aa8.6□□□□□ -1.03
XRN1-206ENST00000467077 A0A1W2PP55 124 aa8.59□□□□□ -1.03
XRN1-206ENST00000467077 SLFN14P0C7P3 912 aa8.59□□□□□ -1.03
XRN1-206ENST00000467077 ITIH2P19823 946 aa8.59□□□□□ -1.03
XRN1-206ENST00000467077 ID3Q02535 119 aa8.59□□□□□ -1.03
XRN1-206ENST00000467077 CILP2Q8IUL8 1156 aa8.59□□□□□ -1.03
XRN1-206ENST00000467077 SIAH1Q8IUQ4 282 aa8.59□□□□□ -1.03
XRN1-206ENST00000467077 TCF12Q99081 682 aa8.59□□□□□ -1.03
XRN1-206ENST00000467077 CRIM1Q9NZV1 1036 aa8.59□□□□□ -1.03
XRN1-206ENST00000467077 ZNF503-AS2A6NEH8 195 aa8.58□□□□□ -1.04
XRN1-206ENST00000467077 RNGTTO60942 597 aaKnown RBP8.58□□□□□ -1.04
XRN1-206ENST00000467077 FAM13AO94988 1023 aa8.58□□□□□ -1.04
XRN1-206ENST00000467077 ZSCAN22P10073 491 aaPredicted RBP8.58□□□□□ -1.04
XRN1-206ENST00000467077 OXCT1P55809 520 aa8.58□□□□□ -1.04
XRN1-206ENST00000467077 SRPK2P78362 688 aaKnown RBP8.58□□□□□ -1.04
XRN1-206ENST00000467077 MPZL3Q6UWV2 235 aa8.58□□□□□ -1.04
XRN1-206ENST00000467077 ZNF576Q9H609 170 aa8.58□□□□□ -1.04
XRN1-206ENST00000467077 LMCD1Q9NZU5 365 aa8.58□□□□□ -1.04
XRN1-206ENST00000467077 U3KQE9 123 aa8.58□□□□□ -1.04
XRN1-206ENST00000467077 IKZF1Q13422 519 aa8.57□□□□□ -1.04
XRN1-206ENST00000467077 MTMR3Q13615 1198 aa8.57□□□□□ -1.04
XRN1-206ENST00000467077 LCNL1Q6ZST4 164 aa8.57□□□□□ -1.04
XRN1-206ENST00000467077 SYDE1Q6ZW31 735 aaPredicted RBP8.57□□□□□ -1.04
XRN1-206ENST00000467077 GALNT12Q8IXK2 581 aa8.57□□□□□ -1.04
XRN1-206ENST00000467077 FANCD2OSQ96PS1 177 aa8.57□□□□□ -1.04
XRN1-206ENST00000467077 PRDM7Q9NQW5 492 aa8.57□□□□□ -1.04
XRN1-206ENST00000467077 LIG1P18858 919 aa8.56□□□□□ -1.04
XRN1-206ENST00000467077 C1QL4Q86Z23 238 aa8.56□□□□□ -1.04
XRN1-206ENST00000467077 ASB11Q8WXH4 323 aa8.56□□□□□ -1.04
XRN1-206ENST00000467077 LIN37Q96GY3 246 aaPredicted RBP8.56□□□□□ -1.04
XRN1-206ENST00000467077 DUSP23Q9BVJ7 150 aa8.56□□□□□ -1.04
XRN1-206ENST00000467077 SNX11Q9Y5W9 270 aa8.56□□□□□ -1.04
XRN1-206ENST00000467077 LEFTY1O75610 366 aa8.55□□□□□ -1.04
XRN1-206ENST00000467077 AFMP43652 599 aa8.55□□□□□ -1.04
XRN1-206ENST00000467077 ZP2Q05996 745 aa8.55□□□□□ -1.04
XRN1-206ENST00000467077 GJD3Q8N144 294 aa8.55□□□□□ -1.04
XRN1-206ENST00000467077 PBXIP1Q96AQ6 731 aa8.55□□□□□ -1.04
XRN1-206ENST00000467077 PLAGL2Q9UPG8 496 aa8.55□□□□□ -1.04
XRN1-206ENST00000467077 NFIBO00712 420 aa8.54□□□□□ -1.04
XRN1-206ENST00000467077 HCLS1P14317 486 aaPredicted RBP8.54□□□□□ -1.04
XRN1-206ENST00000467077 TTLL4Q14679 1199 aa8.54□□□□□ -1.04
XRN1-206ENST00000467077 TOP6BLQ8N6T0 577 aa8.54□□□□□ -1.04
XRN1-206ENST00000467077 EHD4Q9H223 541 aa8.54□□□□□ -1.04
XRN1-206ENST00000467077 PCOLCE2Q9UKZ9 415 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms