RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TBC1D2BQ9UPU7 963 aa20.81■□□□□ 0.92
SNAPC3-205ENST00000467062 CIAO1O76071 339 aa20.81■□□□□ 0.92
SNAPC3-205ENST00000467062 LDHAL6AQ6ZMR3 332 aa20.81■□□□□ 0.92
SNAPC3-205ENST00000467062 CCDC91Q7Z6B0 441 aa20.81■□□□□ 0.92
SNAPC3-205ENST00000467062 SNAP23O00161 211 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 FGAP02671 866 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 PDIA3P30101 505 aaKnown RBP20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 PACS2Q86VP3 889 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 BANK1Q8NDB2 785 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 HELBQ8NG08 1087 aaPredicted RBP20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 GJB4Q9NTQ9 266 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 ADAM21Q9UKJ8 722 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 TBC1D8O95759 1140 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 ITGA6P23229 1130 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 IQCB1Q15051 598 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 METTL24Q5JXM2 366 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 PPM1EQ8WY54 764 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 PPP1R13BQ96KQ4 1090 aa20.8■□□□□ 0.92
SNAPC3-205ENST00000467062 EFCAB8A8MWE9 144 aa20.79■□□□□ 0.92
SNAPC3-205ENST00000467062 SEC31AO94979 1220 aaKnown RBP20.79■□□□□ 0.92
SNAPC3-205ENST00000467062 ZBTB38Q8NAP3 1195 aaPredicted RBP20.79■□□□□ 0.92
SNAPC3-205ENST00000467062 SMARCC2Q8TAQ2 1214 aa20.79■□□□□ 0.92
SNAPC3-205ENST00000467062 NKX2-3Q8TAU0 364 aa20.79■□□□□ 0.92
SNAPC3-205ENST00000467062 ZBTB1Q9Y2K1 713 aa20.79■□□□□ 0.92
SNAPC3-205ENST00000467062 NRDCO43847 1150 aa20.78■□□□□ 0.92
SNAPC3-205ENST00000467062 STARD3NLO95772 234 aa20.78■□□□□ 0.92
SNAPC3-205ENST00000467062 HMGB1P09429 215 aaKnown RBP20.78■□□□□ 0.92
SNAPC3-205ENST00000467062 KCNJ6P48051 423 aa20.78■□□□□ 0.92
SNAPC3-205ENST00000467062 ERCC4Q92889 916 aaPredicted RBP20.78■□□□□ 0.92
SNAPC3-205ENST00000467062 RFX7Q2KHR2 1363 aa20.78■□□□□ 0.92
SNAPC3-205ENST00000467062 PCCAP05165 728 aaPredicted RBP20.78■□□□□ 0.92
SNAPC3-205ENST00000467062 DHX8Q14562 1220 aaKnown RBP20.78■□□□□ 0.92
SNAPC3-205ENST00000467062 BCCIPQ9P287 314 aaKnown RBP eCLIP20.78■□□□□ 0.92
SNAPC3-205ENST00000467062 IMPACTQ9P2X3 320 aa20.78■□□□□ 0.92
SNAPC3-205ENST00000467062 SASH3O75995 380 aa20.77■□□□□ 0.92
SNAPC3-205ENST00000467062 ADD1P35611 737 aaKnown RBP20.77■□□□□ 0.92
SNAPC3-205ENST00000467062 MCAMP43121 646 aa20.77■□□□□ 0.92
SNAPC3-205ENST00000467062 E4F1Q66K89 784 aaPredicted RBP20.77■□□□□ 0.92
SNAPC3-205ENST00000467062 CC2D1AQ6P1N0 951 aaPredicted RBP20.77■□□□□ 0.92
SNAPC3-205ENST00000467062 SUGP1Q8IWZ8 645 aaKnown RBP20.77■□□□□ 0.92
SNAPC3-205ENST00000467062 TTLL11Q8NHH1 800 aa20.77■□□□□ 0.92
SNAPC3-205ENST00000467062 CNNM1Q9NRU3 951 aa20.77■□□□□ 0.92
SNAPC3-205ENST00000467062 PHLPP2Q6ZVD8 1323 aa20.77■□□□□ 0.92
SNAPC3-205ENST00000467062 BECN2A8MW95 431 aa20.77■□□□□ 0.91
SNAPC3-205ENST00000467062 CT47A1Q5JQC4 288 aaPredicted RBP20.77■□□□□ 0.91
SNAPC3-205ENST00000467062 NLRP10Q86W26 655 aa20.77■□□□□ 0.91
SNAPC3-205ENST00000467062 USP28Q96RU2 1077 aa20.77■□□□□ 0.91
SNAPC3-205ENST00000467062 TRMT112Q9UI30 125 aaKnown RBP20.77■□□□□ 0.91
SNAPC3-205ENST00000467062 ABCC6O95255 1503 aa20.76■□□□□ 0.91
SNAPC3-205ENST00000467062 CCP110O43303 1012 aa20.76■□□□□ 0.91
SNAPC3-205ENST00000467062 TADA3O75528 432 aa20.76■□□□□ 0.91
SNAPC3-205ENST00000467062 GIGYF2Q6Y7W6 1299 aaKnown RBP20.76■□□□□ 0.91
SNAPC3-205ENST00000467062 AKAP2Q9Y2D5 859 aa20.76■□□□□ 0.91
SNAPC3-205ENST00000467062 CSF1RP07333 972 aa20.76■□□□□ 0.91
SNAPC3-205ENST00000467062 SWT1Q5T5J6 900 aaKnown RBP20.76■□□□□ 0.91
SNAPC3-205ENST00000467062 FBXW7Q969H0 707 aa20.76■□□□□ 0.91
SNAPC3-205ENST00000467062 OSBPL5Q9H0X9 879 aaPredicted RBP20.76■□□□□ 0.91
SNAPC3-205ENST00000467062 ARFGAP3Q9NP61 516 aa20.76■□□□□ 0.91
SNAPC3-205ENST00000467062 FDPSP14324 419 aaKnown RBP20.75■□□□□ 0.91
SNAPC3-205ENST00000467062 RIPOR2Q9Y4F9 1068 aa20.75■□□□□ 0.91
SNAPC3-205ENST00000467062 MAP3K15Q6ZN16 1313 aa20.75■□□□□ 0.91
SNAPC3-205ENST00000467062 TNS2Q63HR2 1409 aa20.75■□□□□ 0.91
SNAPC3-205ENST00000467062 RPS6KA5O75582 802 aa20.75■□□□□ 0.91
SNAPC3-205ENST00000467062 PRR29P0C7W0 189 aa20.75■□□□□ 0.91
SNAPC3-205ENST00000467062 ETF1P62495 437 aaKnown RBP20.75■□□□□ 0.91
SNAPC3-205ENST00000467062 HOMER1Q86YM7 354 aa20.75■□□□□ 0.91
SNAPC3-205ENST00000467062 CCDC150Q8NCX0 1101 aa20.75■□□□□ 0.91
SNAPC3-205ENST00000467062 CCDC34Q96HJ3 373 aa20.75■□□□□ 0.91
SNAPC3-205ENST00000467062 EIF3CLB5ME19 914 aaKnown RBP20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 IRS4O14654 1257 aaPredicted RBP20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 GPAA1O43292 621 aa20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 IDH1O75874 414 aaKnown RBP20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 STX1AQ16623 288 aa20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 EIF3CQ99613 913 aaKnown RBP20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 POLR3DP05423 398 aaPredicted RBP20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 LRRFIP1Q32MZ4 808 aaKnown RBP20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 SLC9C2Q5TAH2 1124 aa20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 GPR161Q8N6U8 529 aaKnown RBP20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 AGXT2Q9BYV1 514 aa20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 INCENPQ9NQS7 918 aa20.74■□□□□ 0.91
SNAPC3-205ENST00000467062 TJP1Q07157 1748 aa20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 RXRAP19793 462 aa20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 TRIM28Q13263 835 aaKnown RBP20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 IMMTQ16891 758 aaKnown RBP20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 ILDR1Q86SU0 546 aaPredicted RBP20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 GOLPH3LQ9H4A5 285 aa20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 ZSCAN16Q9H4T2 348 aaPredicted RBP20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 PRC1O43663 620 aa20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 CYP19A1P11511 503 aaPredicted RBP20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 DONSONQ9NYP3 566 aa20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 MKRN1Q9UHC7 482 aaKnown RBP20.73■□□□□ 0.91
SNAPC3-205ENST00000467062 EVCP57679 992 aa20.72■□□□□ 0.91
SNAPC3-205ENST00000467062 SART3Q15020 963 aaKnown RBP20.72■□□□□ 0.91
SNAPC3-205ENST00000467062 MCTP2Q6DN12 878 aa20.72■□□□□ 0.91
SNAPC3-205ENST00000467062 CCAR1Q8IX12 1150 aaKnown RBP20.72■□□□□ 0.91
SNAPC3-205ENST00000467062 LLPHQ9BRT6 129 aaKnown RBP20.72■□□□□ 0.91
SNAPC3-205ENST00000467062 CXorf56Q9H5V9 222 aa20.72■□□□□ 0.91
SNAPC3-205ENST00000467062 CFAP45Q9UL16 551 aa20.72■□□□□ 0.91
SNAPC3-205ENST00000467062 LAMB4A4D0S4 1761 aa20.72■□□□□ 0.91
SNAPC3-205ENST00000467062 KLF18A0A0U1RQI7 1052 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms