RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 POU4F3Q15319 338 aa7.68□□□□□ -1.18
LRCH3-212ENST00000466845 SPRED3Q2MJR0 410 aa7.68□□□□□ -1.18
LRCH3-212ENST00000466845 HGSNATQ68CP4 663 aa7.68□□□□□ -1.18
LRCH3-212ENST00000466845 INTS5Q6P9B9 1019 aaKnown RBP7.68□□□□□ -1.18
LRCH3-212ENST00000466845 FAM43BQ6ZT52 329 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-212ENST00000466845 TMC7Q7Z402 723 aa7.68□□□□□ -1.18
LRCH3-212ENST00000466845 NBPF11Q86T75 865 aa7.68□□□□□ -1.18
LRCH3-212ENST00000466845 IPO4Q8TEX9 1081 aaKnown RBP7.68□□□□□ -1.18
LRCH3-212ENST00000466845 DBNDD2Q9BQY9 259 aa7.68□□□□□ -1.18
LRCH3-212ENST00000466845 ZNF576Q9H609 170 aa7.68□□□□□ -1.18
LRCH3-212ENST00000466845 C7orf69Q9H7B7 122 aa7.68□□□□□ -1.18
LRCH3-212ENST00000466845 HYAL3O43820 417 aaPredicted RBP7.67□□□□□ -1.18
LRCH3-212ENST00000466845 GRIK1P39086 918 aa7.67□□□□□ -1.18
LRCH3-212ENST00000466845 PREPP48147 710 aa7.67□□□□□ -1.18
LRCH3-212ENST00000466845 GLIPR1L2Q4G1C9 344 aa7.67□□□□□ -1.18
LRCH3-212ENST00000466845 HSP90AB4PQ58FF6 505 aa7.67□□□□□ -1.18
LRCH3-212ENST00000466845 BEND4Q6ZU67 534 aa7.67□□□□□ -1.18
LRCH3-212ENST00000466845 CORO1BQ9BR76 489 aa7.67□□□□□ -1.18
LRCH3-212ENST00000466845 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
LRCH3-212ENST00000466845 KCNF1Q9H3M0 494 aa7.67□□□□□ -1.18
LRCH3-212ENST00000466845 CECR2Q9BXF3 1484 aa7.67□□□□□ -1.18
LRCH3-212ENST00000466845 TREHO43280 583 aa7.66□□□□□ -1.18
LRCH3-212ENST00000466845 CANXP27824 592 aaKnown RBP7.66□□□□□ -1.18
LRCH3-212ENST00000466845 MAPK1P28482 360 aa7.66□□□□□ -1.18
LRCH3-212ENST00000466845 DEKP35659 375 aaKnown RBP7.66□□□□□ -1.18
LRCH3-212ENST00000466845 USP11P51784 963 aa7.66□□□□□ -1.18
LRCH3-212ENST00000466845 SOX4Q06945 474 aaPredicted RBP7.66□□□□□ -1.18
LRCH3-212ENST00000466845 DSC3Q14574 896 aa7.66□□□□□ -1.18
LRCH3-212ENST00000466845 CPSF6Q16630 551 aaKnown RBP eCLIP7.66□□□□□ -1.18
LRCH3-212ENST00000466845 TRIM42Q8IWZ5 723 aa7.66□□□□□ -1.18
LRCH3-212ENST00000466845 FBF1Q8TES7 1133 aa7.66□□□□□ -1.18
LRCH3-212ENST00000466845 RIPOR2Q9Y4F9 1068 aa7.66□□□□□ -1.18
LRCH3-212ENST00000466845 PLEKHD1A6NEE1 506 aa7.65□□□□□ -1.18
LRCH3-212ENST00000466845 GIPC1O14908 333 aa7.65□□□□□ -1.18
LRCH3-212ENST00000466845 COBLO75128 1261 aa7.65□□□□□ -1.18
LRCH3-212ENST00000466845 MAOBP27338 520 aa7.65□□□□□ -1.18
LRCH3-212ENST00000466845 MAP4P27816 1152 aaKnown RBP7.65□□□□□ -1.18
LRCH3-212ENST00000466845 SRCIN1Q9C0H9 1055 aa7.65□□□□□ -1.18
LRCH3-212ENST00000466845 ABCB6Q9NP58 842 aa7.65□□□□□ -1.18
LRCH3-212ENST00000466845 NEFMP07197 916 aa7.64□□□□□ -1.19
LRCH3-212ENST00000466845 PPP2R3AQ06190 1150 aa7.64□□□□□ -1.19
LRCH3-212ENST00000466845 GRM2Q14416 872 aa7.64□□□□□ -1.19
LRCH3-212ENST00000466845 ENOX2Q16206 610 aaKnown RBP7.64□□□□□ -1.19
LRCH3-212ENST00000466845 PAOXQ6QHF9 649 aa7.64□□□□□ -1.19
LRCH3-212ENST00000466845 RAD18Q9NS91 495 aa7.64□□□□□ -1.19
LRCH3-212ENST00000466845 KCNG1Q9UIX4 513 aa7.64□□□□□ -1.19
LRCH3-212ENST00000466845 HMX2A2RU54 273 aa7.63□□□□□ -1.19
LRCH3-212ENST00000466845 DTHD1Q6ZMT9 781 aa7.63□□□□□ -1.19
LRCH3-212ENST00000466845 ZDHHC13Q8IUH4 622 aa7.63□□□□□ -1.19
LRCH3-212ENST00000466845 EZH1Q92800 747 aaPredicted RBP7.63□□□□□ -1.19
LRCH3-212ENST00000466845 ASB16Q96NS5 453 aa7.63□□□□□ -1.19
LRCH3-212ENST00000466845 IVNS1ABPQ9Y6Y0 642 aa7.63□□□□□ -1.19
LRCH3-212ENST00000466845 FAM95CA0A1B0GW59 222 aa7.62□□□□□ -1.19
LRCH3-212ENST00000466845 DLGAP3O95886 979 aa7.62□□□□□ -1.19
LRCH3-212ENST00000466845 PTMAP06454 111 aaKnown RBP7.62□□□□□ -1.19
LRCH3-212ENST00000466845 RXRBP28702 533 aa7.62□□□□□ -1.19
LRCH3-212ENST00000466845 ALG1LQ6GMV1 187 aa7.62□□□□□ -1.19
LRCH3-212ENST00000466845 GLIS3Q8NEA6 775 aa7.62□□□□□ -1.19
LRCH3-212ENST00000466845 EPS8L3Q8TE67 593 aaKnown RBP7.62□□□□□ -1.19
LRCH3-212ENST00000466845 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.61□□□□□ -1.19
LRCH3-212ENST00000466845 SMARCA5O60264 1052 aaPredicted RBP7.61□□□□□ -1.19
LRCH3-212ENST00000466845 SLFN14P0C7P3 912 aa7.61□□□□□ -1.19
LRCH3-212ENST00000466845 CD97P48960 835 aa7.61□□□□□ -1.19
LRCH3-212ENST00000466845 MAP7Q14244 749 aa7.61□□□□□ -1.19
LRCH3-212ENST00000466845 ANKRD13AQ8IZ07 590 aa7.61□□□□□ -1.19
LRCH3-212ENST00000466845 TMTC2Q8N394 836 aa7.61□□□□□ -1.19
LRCH3-212ENST00000466845 C2CD4AQ8NCU7 369 aaPredicted RBP7.61□□□□□ -1.19
LRCH3-212ENST00000466845 FRMD6Q96NE9 622 aa7.61□□□□□ -1.19
LRCH3-212ENST00000466845 TRIM56Q9BRZ2 755 aaKnown RBP7.61□□□□□ -1.19
LRCH3-212ENST00000466845 METTL22Q9BUU2 404 aaPredicted RBP7.61□□□□□ -1.19
LRCH3-212ENST00000466845 KRT82Q9NSB4 513 aa7.61□□□□□ -1.19
LRCH3-212ENST00000466845 IGSF5Q9NSI5 407 aa7.61□□□□□ -1.19
LRCH3-212ENST00000466845 TMEM39AQ9NV64 488 aa7.61□□□□□ -1.19
LRCH3-212ENST00000466845 PCMTD2Q9NV79 361 aa7.61□□□□□ -1.19
LRCH3-212ENST00000466845 PNMA6FA0A0J9YX94 578 aa7.6□□□□□ -1.19
LRCH3-212ENST00000466845 ADH5P11766 374 aa7.6□□□□□ -1.19
LRCH3-212ENST00000466845 ATP2B2Q01814 1243 aa7.6□□□□□ -1.19
LRCH3-212ENST00000466845 NOL8Q76FK4 1167 aaKnown RBP7.6□□□□□ -1.19
LRCH3-212ENST00000466845 FTSJ3Q8IY81 847 aaKnown RBP7.6□□□□□ -1.19
LRCH3-212ENST00000466845 SPATA32Q96LK8 384 aa7.6□□□□□ -1.19
LRCH3-212ENST00000466845 BCO2Q9BYV7 579 aa7.6□□□□□ -1.19
LRCH3-212ENST00000466845 GSX1Q9H4S2 264 aaPredicted RBP7.6□□□□□ -1.19
LRCH3-212ENST00000466845 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
LRCH3-212ENST00000466845 KIAA1324LA8MWY0 1029 aaPredicted RBP7.59□□□□□ -1.19
LRCH3-212ENST00000466845 FMR1Q06787 632 aaKnown RBP eCLIP7.59□□□□□ -1.19
LRCH3-212ENST00000466845 FAM50AQ14320 339 aaKnown RBP7.59□□□□□ -1.19
LRCH3-212ENST00000466845 NFKBIBQ15653 356 aa7.59□□□□□ -1.19
LRCH3-212ENST00000466845 SGO2Q562F6 1265 aa7.59□□□□□ -1.19
LRCH3-212ENST00000466845 SHKBP1Q8TBC3 707 aa7.59□□□□□ -1.19
LRCH3-212ENST00000466845 ANKRD24Q8TF21 1146 aa7.59□□□□□ -1.19
LRCH3-212ENST00000466845 EMILIN2Q9BXX0 1053 aa7.59□□□□□ -1.19
LRCH3-212ENST00000466845 LAS1LQ9Y4W2 734 aaKnown RBP7.59□□□□□ -1.19
LRCH3-212ENST00000466845 PRR19A6NJB7 356 aa7.58□□□□□ -1.2
LRCH3-212ENST00000466845 AOC2O75106 756 aa7.58□□□□□ -1.2
LRCH3-212ENST00000466845 DRD2P14416 443 aa7.58□□□□□ -1.2
LRCH3-212ENST00000466845 GSTT1P30711 240 aa7.58□□□□□ -1.2
LRCH3-212ENST00000466845 FCGRTP55899 365 aa7.58□□□□□ -1.2
LRCH3-212ENST00000466845 CYP27A1Q02318 531 aa7.58□□□□□ -1.2
LRCH3-212ENST00000466845 PDE3AQ14432 1141 aa7.58□□□□□ -1.2
LRCH3-212ENST00000466845 COL19A1Q14993 1142 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms