RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 WDR89Q96FK6 387 aaPredicted RBP7.01□□□□□ -1.29
VPS13D-203ENST00000466732 KRT82Q9NSB4 513 aa7.01□□□□□ -1.29
VPS13D-203ENST00000466732 PAGE1O75459 146 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 IGLV1-40P01703 118 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 RXRBP28702 533 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 USP11P51784 963 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 TAGLNQ01995 201 aaKnown RBP7□□□□□ -1.29
VPS13D-203ENST00000466732 ZMYM1Q5SVZ6 1142 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 CDPF1Q6NVV7 123 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 SLC51AQ86UW1 340 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 KCNB2Q92953 911 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 EMILIN2Q9BXX0 1053 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 AP4E1Q9UPM8 1137 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 ACTL7BQ9Y614 415 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 SYNGAP1Q96PV0 1343 aa7□□□□□ -1.29
VPS13D-203ENST00000466732 GSC2O15499 205 aa6.99□□□□□ -1.29
VPS13D-203ENST00000466732 BMP6P22004 513 aa6.99□□□□□ -1.29
VPS13D-203ENST00000466732 DAB2P98082 770 aa6.99□□□□□ -1.29
VPS13D-203ENST00000466732 KIF4BQ2VIQ3 1234 aa6.99□□□□□ -1.29
VPS13D-203ENST00000466732 RNF43Q68DV7 783 aa6.99□□□□□ -1.29
VPS13D-203ENST00000466732 DYMQ7RTS9 669 aa6.99□□□□□ -1.29
VPS13D-203ENST00000466732 FBLIM1Q8WUP2 373 aa6.99□□□□□ -1.29
VPS13D-203ENST00000466732 GSX1Q9H4S2 264 aaPredicted RBP6.99□□□□□ -1.29
VPS13D-203ENST00000466732 CBX8Q9HC52 389 aa6.99□□□□□ -1.29
VPS13D-203ENST00000466732 PPP1R9AQ9ULJ8 1098 aa6.99□□□□□ -1.29
VPS13D-203ENST00000466732 TTF2Q9UNY4 1162 aaKnown RBP6.99□□□□□ -1.29
VPS13D-203ENST00000466732 TMPRSS2O15393 492 aa6.98□□□□□ -1.29
VPS13D-203ENST00000466732 CELA3AP09093 270 aa6.98□□□□□ -1.29
VPS13D-203ENST00000466732 XPCQ01831 940 aaPredicted RBP6.98□□□□□ -1.29
VPS13D-203ENST00000466732 ZNF252P-AS1Q0IIN9 211 aa6.98□□□□□ -1.29
VPS13D-203ENST00000466732 NFIAQ12857 509 aa6.98□□□□□ -1.29
VPS13D-203ENST00000466732 PSMD2Q13200 908 aa6.98□□□□□ -1.29
VPS13D-203ENST00000466732 TMCO4Q5TGY1 634 aa6.98□□□□□ -1.29
VPS13D-203ENST00000466732 MAP1SQ66K74 1059 aaPredicted RBP6.98□□□□□ -1.29
VPS13D-203ENST00000466732 GRIN3AQ8TCU5 1115 aa6.98□□□□□ -1.29
VPS13D-203ENST00000466732 EZH1Q92800 747 aaPredicted RBP6.98□□□□□ -1.29
VPS13D-203ENST00000466732 FAM161BQ96MY7 647 aa6.98□□□□□ -1.29
VPS13D-203ENST00000466732 FAM105AQ9NUU6 356 aa6.98□□□□□ -1.29
VPS13D-203ENST00000466732 SAMM50Q9Y512 469 aa6.98□□□□□ -1.29
VPS13D-203ENST00000466732 FAM95CA0A1B0GW59 222 aa6.97□□□□□ -1.29
VPS13D-203ENST00000466732 SLFN14P0C7P3 912 aa6.97□□□□□ -1.29
VPS13D-203ENST00000466732 RAB6AP20340 208 aa6.97□□□□□ -1.29
VPS13D-203ENST00000466732 ASPAP45381 313 aa6.97□□□□□ -1.29
VPS13D-203ENST00000466732 HNRNPUQ00839 825 aaKnown RBP eCLIP6.97□□□□□ -1.29
VPS13D-203ENST00000466732 RASIP1Q5U651 963 aa6.97□□□□□ -1.29
VPS13D-203ENST00000466732 SV2BQ7L1I2 683 aa6.97□□□□□ -1.29
VPS13D-203ENST00000466732 TMC4Q7Z404 712 aa6.97□□□□□ -1.29
VPS13D-203ENST00000466732 YIPF2Q9BWQ6 316 aa6.97□□□□□ -1.29
VPS13D-203ENST00000466732 CRIM1Q9NZV1 1036 aa6.97□□□□□ -1.29
VPS13D-203ENST00000466732 PCDHGC5Q9Y5F6 944 aa6.97□□□□□ -1.29
VPS13D-203ENST00000466732 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-203ENST00000466732 ID3Q02535 119 aa6.96□□□□□ -1.3
VPS13D-203ENST00000466732 NFKBIBQ15653 356 aa6.96□□□□□ -1.3
VPS13D-203ENST00000466732 PAOXQ6QHF9 649 aa6.96□□□□□ -1.3
VPS13D-203ENST00000466732 MPRIPQ6WCQ1 1025 aa6.96□□□□□ -1.3
VPS13D-203ENST00000466732 GPBAR1Q8TDU6 330 aa6.96□□□□□ -1.3
VPS13D-203ENST00000466732 DBNDD2Q9BQY9 259 aa6.96□□□□□ -1.3
VPS13D-203ENST00000466732 ACSS3Q9H6R3 686 aa6.96□□□□□ -1.3
VPS13D-203ENST00000466732 CACNA2D2Q9NY47 1150 aa6.96□□□□□ -1.3
VPS13D-203ENST00000466732 RNF112Q9ULX5 631 aa6.96□□□□□ -1.3
VPS13D-203ENST00000466732 NFICP08651 508 aa6.95□□□□□ -1.3
VPS13D-203ENST00000466732 LRRC14Q15048 493 aa6.95□□□□□ -1.3
VPS13D-203ENST00000466732 MEI1Q5TIA1 1274 aa6.95□□□□□ -1.3
VPS13D-203ENST00000466732 PCNX4Q63HM2 1172 aa6.95□□□□□ -1.3
VPS13D-203ENST00000466732 LLGL2Q6P1M3 1020 aa6.95□□□□□ -1.3
VPS13D-203ENST00000466732 ZDHHC13Q8IUH4 622 aa6.95□□□□□ -1.3
VPS13D-203ENST00000466732 FANCD2OSQ96PS1 177 aa6.95□□□□□ -1.3
VPS13D-203ENST00000466732 TRIM37O94972 964 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 CTSHP09668 335 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 MAP7Q14244 749 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 CCDC85BQ15834 202 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-203ENST00000466732 SHKBP1Q8TBC3 707 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 ACSBG1Q96GR2 724 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 MFSD14AQ96MC6 490 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 BCL2L13Q9BXK5 485 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 ATXN3LQ9H3M9 355 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 SEMA6CQ9H3T2 930 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 DISC1Q9NRI5 854 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 CYP8B1Q9UNU6 501 aa6.94□□□□□ -1.3
VPS13D-203ENST00000466732 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
VPS13D-203ENST00000466732 SORBS3O60504 671 aa6.93□□□□□ -1.3
VPS13D-203ENST00000466732 TGFB1P01137 390 aa6.93□□□□□ -1.3
VPS13D-203ENST00000466732 ZC3H12AQ5D1E8 599 aaKnown RBP6.93□□□□□ -1.3
VPS13D-203ENST00000466732 TTBK2Q6IQ55 1244 aa6.93□□□□□ -1.3
VPS13D-203ENST00000466732 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
VPS13D-203ENST00000466732 PRKAG2Q9UGJ0 569 aa6.93□□□□□ -1.3
VPS13D-203ENST00000466732 SCO2A0A1W2PP80 73 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 WDR64B1ANS9 1081 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 MFAP1P55081 439 aaKnown RBP6.92□□□□□ -1.3
VPS13D-203ENST00000466732 TTLL4Q14679 1199 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 TAF1CQ15572 869 aaPredicted RBP6.92□□□□□ -1.3
VPS13D-203ENST00000466732 SCARA3Q6AZY7 606 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 SHISA5Q8N114 240 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 Q8N3U1 123 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 FBXL6Q8N531 539 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 GIPC2Q8TF65 315 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 PIDD1Q9HB75 910 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 MRS2Q9HD23 443 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 DAGLAQ9Y4D2 1042 aa6.92□□□□□ -1.3
VPS13D-203ENST00000466732 PRR19A6NJB7 356 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms