RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 MEN1O00255 615 aa4.54□□□□□ -1.68
SORT1-202ENST00000466471 PPM1GO15355 546 aaPredicted RBP4.54□□□□□ -1.68
SORT1-202ENST00000466471 RNF144AP50876 292 aaPredicted RBP4.54□□□□□ -1.68
SORT1-202ENST00000466471 FXR1P51114 621 aaKnown RBP eCLIP4.54□□□□□ -1.68
SORT1-202ENST00000466471 EHHADHQ08426 723 aa4.54□□□□□ -1.68
SORT1-202ENST00000466471 TCP11L2Q8N4U5 519 aa4.54□□□□□ -1.68
SORT1-202ENST00000466471 TMEM87AQ8NBN3 555 aa4.54□□□□□ -1.68
SORT1-202ENST00000466471 TSEN2Q8NCE0 465 aaKnown RBP4.54□□□□□ -1.68
SORT1-202ENST00000466471 VTI1AQ96AJ9 217 aa4.54□□□□□ -1.68
SORT1-202ENST00000466471 ZNF837Q96EG3 531 aaPredicted RBP4.54□□□□□ -1.68
SORT1-202ENST00000466471 TANGO6Q9C0B7 1094 aa4.54□□□□□ -1.68
SORT1-202ENST00000466471 TMA7Q9Y2S6 64 aaKnown RBP4.54□□□□□ -1.68
SORT1-202ENST00000466471 THRAP3Q9Y2W1 955 aaKnown RBP4.54□□□□□ -1.68
SORT1-202ENST00000466471 PCDHB11Q9Y5F2 797 aa4.54□□□□□ -1.68
SORT1-202ENST00000466471 SBF1O95248 1867 aa4.54□□□□□ -1.68
SORT1-202ENST00000466471 COL18A1P39060 1754 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 CNTNAP5Q8WYK1 1306 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 IGHA1P01876 353 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 IGHA2P01877 340 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 ATP2B1P20020 1258 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 DEKP35659 375 aaKnown RBP4.53□□□□□ -1.68
SORT1-202ENST00000466471 FANCCQ00597 558 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 DBN1Q16643 649 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 DPH6Q7L8W6 267 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 NT5DC4Q86YG4 428 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 TRIM22Q8IYM9 498 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 GTPBP3Q969Y2 492 aaKnown RBP4.53□□□□□ -1.68
SORT1-202ENST00000466471 MYO19Q96H55 970 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 SLC4A9Q96Q91 983 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 GAS2L1Q99501 681 aaPredicted RBP4.53□□□□□ -1.68
SORT1-202ENST00000466471 MKNK1Q9BUB5 465 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 CCSER2Q9H7U1 834 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 ZNF358Q9NW07 568 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 STIM2Q9P246 746 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 PARP2Q9UGN5 583 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 USP54Q70EL1 1684 aa4.53□□□□□ -1.68
SORT1-202ENST00000466471 PIEZO1Q92508 2521 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 LY75O60449 1722 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 IGSF1Q8N6C5 1336 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 A0A1W2PRU2 124 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 MPSTP25325 297 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 ZNF76P36508 570 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 EPHA4P54764 986 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 ERVK-9P63128 1117 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 RBL2Q08999 1139 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 POU4F2Q12837 409 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 DDX10Q13206 875 aaKnown RBP4.52□□□□□ -1.69
SORT1-202ENST00000466471 ENOX2Q16206 610 aaKnown RBP4.52□□□□□ -1.69
SORT1-202ENST00000466471 FOXR1Q6PIV2 292 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 NEDD1Q8NHV4 660 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 HIRIP3Q9BW71 556 aaPredicted RBP4.52□□□□□ -1.69
SORT1-202ENST00000466471 PRDM11Q9NQV5 511 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 ENAMQ9NRM1 1142 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 MBIPQ9NS73 344 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 PRKAG2Q9UGJ0 569 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 SPATA31E1Q6ZUB1 1445 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 TTC28Q96AY4 2481 aa4.52□□□□□ -1.69
SORT1-202ENST00000466471 ZBED9Q6R2W3 1325 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 KDM2BQ8NHM5 1336 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 CASP8AP2Q9UKL3 1982 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 TMEM229AB2RXF0 380 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 FZD6O60353 706 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 GNA15P30679 374 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 EIF1AXP47813 144 aaKnown RBP4.51□□□□□ -1.69
SORT1-202ENST00000466471 FOXK2Q01167 660 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 PSMD2Q13200 908 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 MTMR3Q13615 1198 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.51□□□□□ -1.69
SORT1-202ENST00000466471 CRELD1Q96HD1 420 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 DCAF5Q96JK2 942 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 DUSP9Q99956 384 aaKnown RBP4.51□□□□□ -1.69
SORT1-202ENST00000466471 TMX1Q9H3N1 280 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 NOP58Q9Y2X3 529 aaKnown RBP4.51□□□□□ -1.69
SORT1-202ENST00000466471 MUC3AQ02505 3323 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 BRCA2P51587 3418 aa4.51□□□□□ -1.69
SORT1-202ENST00000466471 COL5A2P05997 1499 aaPredicted RBP4.5□□□□□ -1.69
SORT1-202ENST00000466471 TIAM2Q8IVF5 1701 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 TLDC2A0PJX2 215 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 ANKRD62A6NC57 917 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 GIPC1O14908 333 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 INHAP05111 366 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 RPLP1P05386 114 aaKnown RBP4.5□□□□□ -1.69
SORT1-202ENST00000466471 BCRP11274 1271 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 BRD2P25440 801 aaKnown RBP4.5□□□□□ -1.69
SORT1-202ENST00000466471 HIRAP54198 1017 aaPredicted RBP4.5□□□□□ -1.69
SORT1-202ENST00000466471 PTPN12Q05209 780 aaKnown RBP4.5□□□□□ -1.69
SORT1-202ENST00000466471 MTFR1Q15390 333 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 SLC27A3Q5K4L6 730 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 CC2D2BQ6DHV5 1058 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 GIMAP6Q6P9H5 292 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 SLC17A8Q8NDX2 589 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 TMC1Q8TDI8 760 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 UBE2Q2Q8WVN8 375 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 SCG3Q8WXD2 468 aaKnown RBP4.5□□□□□ -1.69
SORT1-202ENST00000466471 ACDQ96AP0 544 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 NLRP3Q96P20 1036 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 C2orf49Q9BVC5 232 aaPredicted RBP4.5□□□□□ -1.69
SORT1-202ENST00000466471 MCOLN1Q9GZU1 580 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 DNAJC25Q9H1X3 360 aa4.5□□□□□ -1.69
SORT1-202ENST00000466471 VTI1BQ9UEU0 232 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms