RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-208	ENST00000465634	ADGRA1	Q86SQ6	560 aa		11.58	□□□□□ -0.56
TRIM5-208	ENST00000465634	STRBP	Q96SI9	672 aa	Known RBP	11.58	□□□□□ -0.56
TRIM5-208	ENST00000465634	ESYT1	Q9BSJ8	1104 aa		11.58	□□□□□ -0.56
TRIM5-208	ENST00000465634	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.58	□□□□□ -0.56
TRIM5-208	ENST00000465634	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
TRIM5-208	ENST00000465634	CCDC171	Q6TFL3	1326 aa		11.58	□□□□□ -0.56
TRIM5-208	ENST00000465634	PATL2	C9JE40	543 aa	Known RBP	11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634		M0R2C6	588 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	WNT10B	O00744	389 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	REC8	O95072	547 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	MBD4	O95243	580 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	CHGB	P05060	677 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	EPS15	P42566	896 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	RHBDL3	P58872	404 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	KIF4B	Q2VIQ3	1234 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	GIMAP6	Q6P9H5	292 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	PNMA8A	Q86V59	439 aa	Predicted RBP	11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	MIGA1	Q8NAN2	632 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	ZC3H15	Q8WU90	426 aa	Known RBP	11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	PRMT6	Q96LA8	375 aa	Predicted RBP	11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	SEC62	Q99442	399 aa	Known RBP	11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	ATP8A2	Q9NTI2	1148 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	USP40	Q9NVE5	1235 aa		11.57	□□□□□ -0.56
TRIM5-208	ENST00000465634	MAST2	Q6P0Q8	1798 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	VEGFA	P15692	232 aa	Predicted RBP	11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	EPHX2	P34913	555 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	DYNLL1	P63167	89 aa	Known RBP	11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	SLFNL1	Q499Z3	407 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	C8orf34	Q49A92	452 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	CDC42EP5	Q6NZY7	148 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	SAMD7	Q7Z3H4	446 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	DDRGK1	Q96HY6	314 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	DSCC1	Q9BVC3	393 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	IDI2	Q9BXS1	227 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	ARMT1	Q9H993	441 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	TMOD2	Q9NZR1	351 aa		11.56	□□□□□ -0.56
TRIM5-208	ENST00000465634	TNFAIP1	Q13829	316 aa		11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	ALX1	Q15699	326 aa		11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	SPDYE2	Q495Y8	402 aa		11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	TEX11	Q8IYF3	940 aa		11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	LCORL	Q8N3X6	602 aa		11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	NACAP1	Q9BZK3	213 aa		11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	TDRD3	Q9H7E2	651 aa	Known RBP	11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	ZNF70	Q9UC06	446 aa	Predicted RBP	11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	SLC4A4	Q9Y6R1	1079 aa		11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	ZMYM6	O95789	1325 aa		11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	PITPNM2	Q9BZ72	1349 aa		11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	WDR90	Q96KV7	1748 aa		11.55	□□□□□ -0.56
TRIM5-208	ENST00000465634	UTRN	P46939	3433 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	SHTN1	A0MZ66	631 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	GSG1L2	A8MUP6	293 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	POTEC	B2RU33	542 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	ENTPD3	O75355	529 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	HSPD1	P10809	573 aa	Known RBP	11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	USP5	P45974	858 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	TNNI2	P48788	182 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	NBPF9	Q3BBW0	867 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	RBM26	Q5T8P6	1007 aa	Known RBP	11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	FAM83A	Q86UY5	434 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	MAP4K1	Q92918	833 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	PGAP2	Q9UHJ9	254 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	CTNNA3	Q9UI47	895 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	TAOK2	Q9UL54	1235 aa		11.54	□□□□□ -0.56
TRIM5-208	ENST00000465634	AK9	Q5TCS8	1911 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	WDHD1	O75717	1129 aa	Predicted RBP	11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	EGFR	P00533	1210 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	APP	P05067	770 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	HIRA	P54198	1017 aa	Predicted RBP	11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	CCDC129	Q6ZRS4	1044 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	AMOTL1	Q8IY63	956 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	TRPM4	Q8TD43	1214 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	TGFBRAP1	Q8WUH2	860 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	BACH2	Q9BYV9	841 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	LSG1	Q9H089	658 aa	Known RBP	11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	DHX36	Q9H2U1	1008 aa	Known RBP	11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	RRAGC	Q9HB90	399 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	ANO2	Q9NQ90	1003 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	MKRN1	Q9UHC7	482 aa	Known RBP	11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	PCDHAC2	Q9Y5I4	1007 aa		11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634		U3KPZ7	1027 aa	Predicted RBP	11.53	□□□□□ -0.56
TRIM5-208	ENST00000465634	MYH7	P12883	1935 aa		11.52	□□□□□ -0.56
TRIM5-208	ENST00000465634	SCN4A	P35499	1836 aa		11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	SBK1	Q52WX2	424 aa		11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	IFNL3	Q8IZI9	196 aa		11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	FAM151A	Q8WW52	585 aa		11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	DCPS	Q96C86	337 aa	Known RBP	11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	NAPB	Q9H115	298 aa		11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	IL25	Q9H293	177 aa		11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	PPP2R3B	Q9Y5P8	575 aa		11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	FLT1	P17948	1338 aa		11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	MYH2	Q9UKX2	1941 aa		11.52	□□□□□ -0.57
TRIM5-208	ENST00000465634	CLRN2	A0PK11	232 aa		11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	PRKAB2	O43741	272 aa		11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms