RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 STRBPQ96SI9 672 aaKnown RBP17.18■□□□□ 0.34
COL5A1-205ENST00000464187 DLEC1Q9Y238 1755 aa17.18■□□□□ 0.34
COL5A1-205ENST00000464187 G3V3G9 751 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 STX6O43752 255 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 LDHBP07195 334 aaKnown RBP17.17■□□□□ 0.34
COL5A1-205ENST00000464187 GJB2P29033 226 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 CCDC93Q567U6 631 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 DCAF8Q5TAQ9 597 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 CD2APQ9Y5K6 639 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 MBD3O95983 291 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 CYP21A2P08686 494 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 TOB2Q14106 344 aaPredicted RBP17.17■□□□□ 0.34
COL5A1-205ENST00000464187 FOXD4L6Q3SYB3 417 aaPredicted RBP17.17■□□□□ 0.34
COL5A1-205ENST00000464187 FOXD4L3Q6VB84 417 aaPredicted RBP17.17■□□□□ 0.34
COL5A1-205ENST00000464187 DZIP1Q86YF9 867 aaKnown RBP17.17■□□□□ 0.34
COL5A1-205ENST00000464187 NECAB1Q8N987 351 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 TCEANC2Q96MN5 208 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
COL5A1-205ENST00000464187 MYH13Q9UKX3 1938 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 IGSF3O75054 1194 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 FGAP02671 866 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 GTF2IP78347 998 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 KRT32Q14532 448 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 ANKRD1Q15327 319 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 GRIK5Q16478 980 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 MFSD14BQ5SR56 506 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 RTKN2Q8IZC4 609 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 DBNDD1Q9H9R9 158 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 TMEM63CQ9P1W3 806 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 SRCAPQ6ZRS2 3230 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
COL5A1-205ENST00000464187 DTNBO60941 627 aa17.15■□□□□ 0.34
COL5A1-205ENST00000464187 APPP05067 770 aa17.15■□□□□ 0.34
COL5A1-205ENST00000464187 TMED8Q6PL24 325 aaPredicted RBP17.15■□□□□ 0.34
COL5A1-205ENST00000464187 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
COL5A1-205ENST00000464187 LCORLQ8N3X6 602 aa17.15■□□□□ 0.34
COL5A1-205ENST00000464187 SUPT20HQ8NEM7 779 aa17.15■□□□□ 0.34
COL5A1-205ENST00000464187 TBC1D22AQ8WUA7 517 aa17.15■□□□□ 0.34
COL5A1-205ENST00000464187 MAGEB6P1A0A0J9YX57 407 aa17.14■□□□□ 0.34
COL5A1-205ENST00000464187 F13A1P00488 732 aa17.14■□□□□ 0.34
COL5A1-205ENST00000464187 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.34
COL5A1-205ENST00000464187 AOC3Q16853 763 aa17.14■□□□□ 0.34
COL5A1-205ENST00000464187 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.34
COL5A1-205ENST00000464187 TTLL5Q6EMB2 1281 aa17.14■□□□□ 0.34
COL5A1-205ENST00000464187 TMEM87AQ8NBN3 555 aa17.14■□□□□ 0.34
COL5A1-205ENST00000464187 RIOK1Q9BRS2 568 aaKnown RBP17.14■□□□□ 0.34
COL5A1-205ENST00000464187 CTNNA3Q9UI47 895 aa17.14■□□□□ 0.34
COL5A1-205ENST00000464187 PATL2C9JE40 543 aaKnown RBP17.14■□□□□ 0.33
COL5A1-205ENST00000464187 GNAT2P19087 354 aa17.14■□□□□ 0.33
COL5A1-205ENST00000464187 FBXW7Q969H0 707 aa17.14■□□□□ 0.33
COL5A1-205ENST00000464187 PSMD1Q99460 953 aa17.14■□□□□ 0.33
COL5A1-205ENST00000464187 SPON1Q9HCB6 807 aa17.14■□□□□ 0.33
COL5A1-205ENST00000464187 GDPD2Q9HCC8 539 aa17.14■□□□□ 0.33
COL5A1-205ENST00000464187 MTMR6Q9Y217 621 aa17.14■□□□□ 0.33
COL5A1-205ENST00000464187 UTRNP46939 3433 aa17.14■□□□□ 0.33
COL5A1-205ENST00000464187 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
COL5A1-205ENST00000464187 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
COL5A1-205ENST00000464187 NEK1Q96PY6 1258 aa17.13■□□□□ 0.33
COL5A1-205ENST00000464187 PPIP5K2O43314 1243 aa17.12■□□□□ 0.33
COL5A1-205ENST00000464187 PRKAB2O43741 272 aa17.12■□□□□ 0.33
COL5A1-205ENST00000464187 ECE2O60344 883 aa17.12■□□□□ 0.33
COL5A1-205ENST00000464187 GADD45BO75293 160 aaPredicted RBP17.12■□□□□ 0.33
COL5A1-205ENST00000464187 DYNLL1P63167 89 aaKnown RBP17.12■□□□□ 0.33
COL5A1-205ENST00000464187 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
COL5A1-205ENST00000464187 AATFQ9NY61 560 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL5A1-205ENST00000464187 SLC4A4Q9Y6R1 1079 aa17.12■□□□□ 0.33
COL5A1-205ENST00000464187 GSG1L2A8MUP6 293 aa17.12■□□□□ 0.33
COL5A1-205ENST00000464187 DIXDC1Q155Q3 683 aa17.12■□□□□ 0.33
COL5A1-205ENST00000464187 IMMTQ16891 758 aaKnown RBP17.12■□□□□ 0.33
COL5A1-205ENST00000464187 STOX1Q6ZVD7 989 aa17.12■□□□□ 0.33
COL5A1-205ENST00000464187 FAM43AQ8N2R8 423 aa17.12■□□□□ 0.33
COL5A1-205ENST00000464187 EPB41L4AQ9HCS5 686 aaPredicted RBP17.12■□□□□ 0.33
COL5A1-205ENST00000464187 CNPY2Q9Y2B0 182 aa17.12■□□□□ 0.33
COL5A1-205ENST00000464187 HAND2P61296 217 aa17.11■□□□□ 0.33
COL5A1-205ENST00000464187 GSTO1P78417 241 aa17.11■□□□□ 0.33
COL5A1-205ENST00000464187 IFNL3Q8IZI9 196 aa17.11■□□□□ 0.33
COL5A1-205ENST00000464187 KCNQ5Q9NR82 932 aa17.11■□□□□ 0.33
COL5A1-205ENST00000464187 ALX1Q15699 326 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 CERS5Q8N5B7 392 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 NLGN2Q8NFZ4 835 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 SDR42E1Q8WUS8 393 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 NAPBQ9H115 298 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
COL5A1-205ENST00000464187 SUGT1Q9Y2Z0 365 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 CHD4Q14839 1912 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 MYH15Q9Y2K3 1946 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 ZMYM6O95789 1325 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 ZNF213O14771 459 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 NASPP49321 788 aaPredicted RBP17.1■□□□□ 0.33
COL5A1-205ENST00000464187 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 BCS1LQ9Y276 419 aa17.1■□□□□ 0.33
COL5A1-205ENST00000464187 MROH7-TTC4A0A0A0MT08 1334 aa17.09■□□□□ 0.33
COL5A1-205ENST00000464187 SYCE3A1L190 88 aa17.09■□□□□ 0.33
COL5A1-205ENST00000464187 LDHCP07864 332 aa17.09■□□□□ 0.33
COL5A1-205ENST00000464187 STRIP1Q5VSL9 837 aa17.09■□□□□ 0.33
COL5A1-205ENST00000464187 LRSAM1Q6UWE0 723 aa17.09■□□□□ 0.33
COL5A1-205ENST00000464187 Q6ZUG5 572 aa17.09■□□□□ 0.33
COL5A1-205ENST00000464187 ATP6V1DQ9Y5K8 247 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms