RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 OAS3Q9Y6K5 1087 aaKnown RBP8.01□□□□□ -1.13
ITGB1-208ENST00000464001 SLFN14P0C7P3 912 aa8□□□□□ -1.13
ITGB1-208ENST00000464001 ADMP35318 185 aa8□□□□□ -1.13
ITGB1-208ENST00000464001 CYP27A1Q02318 531 aa8□□□□□ -1.13
ITGB1-208ENST00000464001 FAAP100Q0VG06 881 aa8□□□□□ -1.13
ITGB1-208ENST00000464001 DUSP27Q5VZP5 1158 aa8□□□□□ -1.13
ITGB1-208ENST00000464001 SHISA5Q8N114 240 aa8□□□□□ -1.13
ITGB1-208ENST00000464001 BCO2Q9BYV7 579 aa8□□□□□ -1.13
ITGB1-208ENST00000464001 SEMA6CQ9H3T2 930 aa8□□□□□ -1.13
ITGB1-208ENST00000464001 GPN3Q9UHW5 284 aaPredicted RBP8□□□□□ -1.13
ITGB1-208ENST00000464001 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
ITGB1-208ENST00000464001 CYP26A1O43174 497 aa7.99□□□□□ -1.13
ITGB1-208ENST00000464001 ADAMTS4O75173 837 aa7.99□□□□□ -1.13
ITGB1-208ENST00000464001 LIG1P18858 919 aa7.99□□□□□ -1.13
ITGB1-208ENST00000464001 DSC3Q14574 896 aa7.99□□□□□ -1.13
ITGB1-208ENST00000464001 TMEM39AQ9NV64 488 aa7.99□□□□□ -1.13
ITGB1-208ENST00000464001 PNMA6FA0A0J9YX94 578 aa7.98□□□□□ -1.13
ITGB1-208ENST00000464001 TREHO43280 583 aa7.98□□□□□ -1.13
ITGB1-208ENST00000464001 GSTP1P09211 210 aaKnown RBP7.98□□□□□ -1.13
ITGB1-208ENST00000464001 ENOX2Q16206 610 aaKnown RBP7.98□□□□□ -1.13
ITGB1-208ENST00000464001 PI16Q6UXB8 463 aa7.98□□□□□ -1.13
ITGB1-208ENST00000464001 GATA6Q92908 595 aa7.98□□□□□ -1.13
ITGB1-208ENST00000464001 ZC3H12CQ9C0D7 883 aaKnown RBP7.98□□□□□ -1.13
ITGB1-208ENST00000464001 CCDC86Q9H6F5 360 aaKnown RBP7.98□□□□□ -1.13
ITGB1-208ENST00000464001 KRT82Q9NSB4 513 aa7.98□□□□□ -1.13
ITGB1-208ENST00000464001 PPP1R9AQ9ULJ8 1098 aa7.98□□□□□ -1.13
ITGB1-208ENST00000464001 FAM170BA6NMN3 283 aa7.97□□□□□ -1.13
ITGB1-208ENST00000464001 MSMPQ1L6U9 139 aa7.97□□□□□ -1.13
ITGB1-208ENST00000464001 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.97□□□□□ -1.13
ITGB1-208ENST00000464001 ZSCAN29Q8IWY8 852 aaPredicted RBP7.97□□□□□ -1.13
ITGB1-208ENST00000464001 ATXN3LQ9H3M9 355 aa7.97□□□□□ -1.13
ITGB1-208ENST00000464001 PIDD1Q9HB75 910 aa7.97□□□□□ -1.13
ITGB1-208ENST00000464001 ANGEL1Q9UNK9 670 aaKnown RBP7.97□□□□□ -1.13
ITGB1-208ENST00000464001 AKAP2Q9Y2D5 859 aa7.97□□□□□ -1.13
ITGB1-208ENST00000464001 DAGLAQ9Y4D2 1042 aa7.97□□□□□ -1.13
ITGB1-208ENST00000464001 TMPRSS2O15393 492 aa7.96□□□□□ -1.14
ITGB1-208ENST00000464001 ID3Q02535 119 aa7.96□□□□□ -1.14
ITGB1-208ENST00000464001 NXPE4Q6UWF7 544 aa7.96□□□□□ -1.14
ITGB1-208ENST00000464001 CRIM1Q9NZV1 1036 aa7.96□□□□□ -1.14
ITGB1-208ENST00000464001 PAX4O43316 350 aa7.95□□□□□ -1.14
ITGB1-208ENST00000464001 KIF4BQ2VIQ3 1234 aa7.95□□□□□ -1.14
ITGB1-208ENST00000464001 SEZ6L2Q6UXD5 910 aa7.95□□□□□ -1.14
ITGB1-208ENST00000464001 KCNB2Q92953 911 aa7.95□□□□□ -1.14
ITGB1-208ENST00000464001 WDR89Q96FK6 387 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-208ENST00000464001 C1GALT1Q9NS00 363 aa7.95□□□□□ -1.14
ITGB1-208ENST00000464001 ZNF862O60290 1169 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 PRNPP04156 253 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 ARNTP27540 789 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 KCNA1Q09470 495 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 OGFOD3Q6PK18 319 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 VSIG10LQ86VR7 867 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 SULF2Q8IWU5 870 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 FBF1Q8TES7 1133 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 FANCD2OSQ96PS1 177 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 EMILIN2Q9BXX0 1053 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 LGR6Q9HBX8 967 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 BSDC1Q9NW68 430 aaPredicted RBP7.94□□□□□ -1.14
ITGB1-208ENST00000464001 CCDC39Q9UFE4 941 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 IVNS1ABPQ9Y6Y0 642 aa7.94□□□□□ -1.14
ITGB1-208ENST00000464001 TAL1P17542 331 aaPredicted RBP7.93□□□□□ -1.14
ITGB1-208ENST00000464001 MAPK8P45983 427 aa7.93□□□□□ -1.14
ITGB1-208ENST00000464001 CYP27C1Q4G0S4 372 aa7.93□□□□□ -1.14
ITGB1-208ENST00000464001 ZNF765Q7L2R6 523 aa7.93□□□□□ -1.14
ITGB1-208ENST00000464001 PDZD3Q86UT5 571 aa7.93□□□□□ -1.14
ITGB1-208ENST00000464001 FBXL18Q96ME1 805 aa7.93□□□□□ -1.14
ITGB1-208ENST00000464001 KRTAP9-2Q9BYQ4 174 aa7.93□□□□□ -1.14
ITGB1-208ENST00000464001 SRCIN1Q9C0H9 1055 aa7.93□□□□□ -1.14
ITGB1-208ENST00000464001 LRRC4CQ9HCJ2 640 aa7.93□□□□□ -1.14
ITGB1-208ENST00000464001 DYNC1LI2O43237 492 aaPredicted RBP7.92□□□□□ -1.14
ITGB1-208ENST00000464001 NME2P22392 152 aa7.92□□□□□ -1.14
ITGB1-208ENST00000464001 GSTT1P30711 240 aa7.92□□□□□ -1.14
ITGB1-208ENST00000464001 ALG1LQ6GMV1 187 aa7.92□□□□□ -1.14
ITGB1-208ENST00000464001 SMYD4Q8IYR2 804 aaPredicted RBP7.92□□□□□ -1.14
ITGB1-208ENST00000464001 ASB16Q96NS5 453 aa7.92□□□□□ -1.14
ITGB1-208ENST00000464001 DISC1Q9NRI5 854 aa7.92□□□□□ -1.14
ITGB1-208ENST00000464001 GIPC1O14908 333 aa7.91□□□□□ -1.14
ITGB1-208ENST00000464001 RNGTTO60942 597 aaKnown RBP7.91□□□□□ -1.14
ITGB1-208ENST00000464001 ZC3H7BQ9UGR2 993 aaKnown RBP7.91□□□□□ -1.14
ITGB1-208ENST00000464001 SAMM50Q9Y512 469 aa7.91□□□□□ -1.14
ITGB1-208ENST00000464001 PCDHGC5Q9Y5F6 944 aa7.91□□□□□ -1.14
ITGB1-208ENST00000464001 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-208ENST00000464001 ATP2B2Q01814 1243 aa7.9□□□□□ -1.14
ITGB1-208ENST00000464001 FMR1Q06787 632 aaKnown RBP eCLIP7.9□□□□□ -1.14
ITGB1-208ENST00000464001 MAP1SQ66K74 1059 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-208ENST00000464001 C3orf58Q8NDZ4 430 aa7.9□□□□□ -1.14
ITGB1-208ENST00000464001 STK35Q8TDR2 534 aa7.9□□□□□ -1.14
ITGB1-208ENST00000464001 CEP44Q9C0F1 390 aa7.9□□□□□ -1.14
ITGB1-208ENST00000464001 ADGRE2Q9UHX3 823 aa7.9□□□□□ -1.14
ITGB1-208ENST00000464001 PCOLCE2Q9UKZ9 415 aa7.9□□□□□ -1.14
ITGB1-208ENST00000464001 PATL2C9JE40 543 aaKnown RBP7.89□□□□□ -1.15
ITGB1-208ENST00000464001 TTLL4Q14679 1199 aa7.89□□□□□ -1.15
ITGB1-208ENST00000464001 TP53INP2Q8IXH6 220 aa7.89□□□□□ -1.15
ITGB1-208ENST00000464001 ABI1Q8IZP0 508 aa7.89□□□□□ -1.15
ITGB1-208ENST00000464001 NECAB3Q96P71 396 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-208ENST00000464001 CBX8Q9HC52 389 aa7.89□□□□□ -1.15
ITGB1-208ENST00000464001 PPM1HQ9ULR3 514 aa7.89□□□□□ -1.15
ITGB1-208ENST00000464001 KRTAP9-6A0A140TA67 174 aa7.88□□□□□ -1.15
ITGB1-208ENST00000464001 HCLS1P14317 486 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-208ENST00000464001 TXKP42681 527 aa7.88□□□□□ -1.15
ITGB1-208ENST00000464001 CDK5R2Q13319 367 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms