RNA–Protein interactions for RNA: ENST00000463709.1

TM9SF2-202, Transcript of transmembrane 9 superfamily member 2, humanhuman

TSL 3

Gene TM9SF2, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-202ENST00000463709 KCNB2Q92953 911 aa7.88□□□□□ -1.15
TM9SF2-202ENST00000463709 NRSN2Q9GZP1 204 aa7.88□□□□□ -1.15
TM9SF2-202ENST00000463709 MRPL18Q9H0U6 180 aaKnown RBP7.88□□□□□ -1.15
TM9SF2-202ENST00000463709 AKTIPQ9H8T0 292 aa7.88□□□□□ -1.15
TM9SF2-202ENST00000463709 GGT7Q9UJ14 662 aa7.88□□□□□ -1.15
TM9SF2-202ENST00000463709 LOC100289279A0A1B0GTE1 492 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 NME2P22392 152 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 ST13P50502 369 aaKnown RBP7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 ZNF394Q53GI3 561 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 MAP1SQ66K74 1059 aaPredicted RBP7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 TTBK2Q6IQ55 1244 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 MAP4K3Q8IVH8 894 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 TMEM130Q8N3G9 435 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 WDR89Q96FK6 387 aaPredicted RBP7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 KRTAP4-12Q9BQ66 201 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 CORO1BQ9BR76 489 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 SOX17Q9H6I2 414 aaPredicted RBP7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 PCDHB5Q9Y5E4 795 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 PCDHGB7Q9Y5F8 929 aa7.87□□□□□ -1.15
TM9SF2-202ENST00000463709 SCAMP3O14828 347 aaKnown RBP7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 LIG1P18858 919 aa7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 ARNTP27540 789 aa7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 ITGAEP38570 1179 aa7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 LIG3P49916 1009 aa7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 KIAA1211Q6ZU35 1233 aa7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 SLC51AQ86UW1 340 aa7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 DDX54Q8TDD1 881 aaKnown RBP7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 CCDC86Q9H6F5 360 aaKnown RBP7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 SRA1Q9HD15 236 aaKnown RBP7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 KBTBD4Q9NVX7 518 aa7.86□□□□□ -1.15
TM9SF2-202ENST00000463709 CYP11A1P05108 521 aa7.85□□□□□ -1.15
TM9SF2-202ENST00000463709 GSTP1P09211 210 aaKnown RBP7.85□□□□□ -1.15
TM9SF2-202ENST00000463709 FAM160A1Q05DH4 1040 aa7.85□□□□□ -1.15
TM9SF2-202ENST00000463709 PTPN11Q06124 597 aaPredicted RBP7.85□□□□□ -1.15
TM9SF2-202ENST00000463709 PDE3AQ14432 1141 aa7.85□□□□□ -1.15
TM9SF2-202ENST00000463709 PDZD3Q86UT5 571 aa7.85□□□□□ -1.15
TM9SF2-202ENST00000463709 DCAF11Q8TEB1 546 aa7.85□□□□□ -1.15
TM9SF2-202ENST00000463709 RNF34Q969K3 372 aa7.85□□□□□ -1.15
TM9SF2-202ENST00000463709 F8W735 103 aaPredicted RBP7.84□□□□□ -1.15
TM9SF2-202ENST00000463709 TFE3P19532 575 aaPredicted RBP7.84□□□□□ -1.15
TM9SF2-202ENST00000463709 GBP2P32456 591 aaPredicted RBP7.84□□□□□ -1.15
TM9SF2-202ENST00000463709 AP3B2Q13367 1082 aa7.84□□□□□ -1.15
TM9SF2-202ENST00000463709 SEPT6Q14141 434 aa7.84□□□□□ -1.15
TM9SF2-202ENST00000463709 METTL16Q86W50 562 aaKnown RBP7.84□□□□□ -1.15
TM9SF2-202ENST00000463709 ANKRD24Q8TF21 1146 aa7.84□□□□□ -1.15
TM9SF2-202ENST00000463709 NOC4LQ9BVI4 516 aaKnown RBP7.84□□□□□ -1.15
TM9SF2-202ENST00000463709 RUSC1Q9BVN2 902 aa7.84□□□□□ -1.15
TM9SF2-202ENST00000463709 ZNF862O60290 1169 aa7.83□□□□□ -1.16
TM9SF2-202ENST00000463709 TCF3P15923 654 aa7.83□□□□□ -1.16
TM9SF2-202ENST00000463709 FSTP19883 344 aa7.83□□□□□ -1.16
TM9SF2-202ENST00000463709 Q6ZS46 218 aa7.83□□□□□ -1.16
TM9SF2-202ENST00000463709 HS2ST1Q7LGA3 356 aa7.83□□□□□ -1.16
TM9SF2-202ENST00000463709 ERMP1Q7Z2K6 904 aa7.83□□□□□ -1.16
TM9SF2-202ENST00000463709 NT5DC4Q86YG4 428 aa7.83□□□□□ -1.16
TM9SF2-202ENST00000463709 RELL1Q8IUW5 271 aa7.83□□□□□ -1.16
TM9SF2-202ENST00000463709 PHC3Q8NDX5 983 aa7.83□□□□□ -1.16
TM9SF2-202ENST00000463709 JARID2Q92833 1246 aaPredicted RBP7.83□□□□□ -1.16
TM9SF2-202ENST00000463709 PF4P02776 101 aa7.82□□□□□ -1.16
TM9SF2-202ENST00000463709 DRD2P14416 443 aa7.82□□□□□ -1.16
TM9SF2-202ENST00000463709 CDK8P49336 464 aa7.82□□□□□ -1.16
TM9SF2-202ENST00000463709 ZNF252P-AS1Q0IIN9 211 aa7.82□□□□□ -1.16
TM9SF2-202ENST00000463709 LCE3BQ5TA77 95 aa7.82□□□□□ -1.16
TM9SF2-202ENST00000463709 LLGL2Q6P1M3 1020 aa7.82□□□□□ -1.16
TM9SF2-202ENST00000463709 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.82□□□□□ -1.16
TM9SF2-202ENST00000463709 GPBAR1Q8TDU6 330 aa7.82□□□□□ -1.16
TM9SF2-202ENST00000463709 SAMM50Q9Y512 469 aa7.82□□□□□ -1.16
TM9SF2-202ENST00000463709 RACK1P63244 317 aaKnown RBP7.81□□□□□ -1.16
TM9SF2-202ENST00000463709 AKAP4Q5JQC9 854 aa7.81□□□□□ -1.16
TM9SF2-202ENST00000463709 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.81□□□□□ -1.16
TM9SF2-202ENST00000463709 AGMOQ6ZNB7 445 aa7.81□□□□□ -1.16
TM9SF2-202ENST00000463709 ACSBG1Q96GR2 724 aa7.81□□□□□ -1.16
TM9SF2-202ENST00000463709 TMEM74Q96NL1 305 aa7.81□□□□□ -1.16
TM9SF2-202ENST00000463709 EMILIN2Q9BXX0 1053 aa7.81□□□□□ -1.16
TM9SF2-202ENST00000463709 RAD18Q9NS91 495 aa7.81□□□□□ -1.16
TM9SF2-202ENST00000463709 PCMTD2Q9NV79 361 aa7.81□□□□□ -1.16
TM9SF2-202ENST00000463709 CSADQ9Y600 493 aa7.81□□□□□ -1.16
TM9SF2-202ENST00000463709 GLB1P16278 677 aa7.8□□□□□ -1.16
TM9SF2-202ENST00000463709 LMNB1P20700 586 aa7.8□□□□□ -1.16
TM9SF2-202ENST00000463709 CAMK2GQ13555 558 aaPredicted RBP7.8□□□□□ -1.16
TM9SF2-202ENST00000463709 BNC2Q6ZN30 1099 aaPredicted RBP7.8□□□□□ -1.16
TM9SF2-202ENST00000463709 USP48Q86UV5 1035 aa7.8□□□□□ -1.16
TM9SF2-202ENST00000463709 RSRP1Q9BUV0 290 aa7.8□□□□□ -1.16
TM9SF2-202ENST00000463709 WDR18Q9BV38 432 aa7.8□□□□□ -1.16
TM9SF2-202ENST00000463709 METTL5Q9NRN9 209 aaKnown RBP7.8□□□□□ -1.16
TM9SF2-202ENST00000463709 EXOSC6Q5RKV6 272 aaKnown RBP7.79□□□□□ -1.16
TM9SF2-202ENST00000463709 NUTM2GQ5VZR2 741 aa7.79□□□□□ -1.16
TM9SF2-202ENST00000463709 C12orf50Q8NA57 414 aaPredicted RBP7.79□□□□□ -1.16
TM9SF2-202ENST00000463709 GAL3ST3Q96A11 431 aa7.79□□□□□ -1.16
TM9SF2-202ENST00000463709 IGSF5Q9NSI5 407 aa7.79□□□□□ -1.16
TM9SF2-202ENST00000463709 ADAMTS1Q9UHI8 967 aa7.79□□□□□ -1.16
TM9SF2-202ENST00000463709 PCDHA4Q9UN74 947 aa7.79□□□□□ -1.16
TM9SF2-202ENST00000463709 DCDC2CA8MYV0 355 aa7.78□□□□□ -1.16
TM9SF2-202ENST00000463709 TLR3O15455 904 aaKnown RBP7.78□□□□□ -1.16
TM9SF2-202ENST00000463709 AOC2O75106 756 aa7.78□□□□□ -1.16
TM9SF2-202ENST00000463709 ERCC5P28715 1186 aaPredicted RBP7.78□□□□□ -1.16
TM9SF2-202ENST00000463709 RAD51AP2Q09MP3 1159 aa7.78□□□□□ -1.16
TM9SF2-202ENST00000463709 LRRC14Q15048 493 aa7.78□□□□□ -1.16
TM9SF2-202ENST00000463709 SNAP47Q5SQN1 464 aa7.78□□□□□ -1.16
TM9SF2-202ENST00000463709 GOLM1Q8NBJ4 401 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms