RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 BAG3O95817 575 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 PTGER2P43116 358 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 SLF2Q8IX21 1173 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 PSMD1Q99460 953 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 NBPF3Q9H094 633 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 DALRD3Q5D0E6 543 aaKnown RBP22.53■■□□□ 1.2
CCDC78-206ENST00000463539 RALYLQ86SE5 291 aaKnown RBP22.53■■□□□ 1.2
CCDC78-206ENST00000463539 TBC1D10CQ8IV04 446 aa22.53■■□□□ 1.2
CCDC78-206ENST00000463539 PPIP5K2O43314 1243 aa22.52■■□□□ 1.2
CCDC78-206ENST00000463539 CUL4AQ13619 759 aa22.52■■□□□ 1.2
CCDC78-206ENST00000463539 GIMAP6Q6P9H5 292 aa22.52■■□□□ 1.2
CCDC78-206ENST00000463539 NCOA7Q8NI08 942 aa22.52■■□□□ 1.2
CCDC78-206ENST00000463539 LARP6Q9BRS8 491 aaKnown RBP22.52■■□□□ 1.2
CCDC78-206ENST00000463539 CCDC88AQ3V6T2 1871 aa22.52■■□□□ 1.2
CCDC78-206ENST00000463539 FGD1P98174 961 aa22.52■■□□□ 1.2
CCDC78-206ENST00000463539 TRDNQ13061 729 aa22.52■■□□□ 1.2
CCDC78-206ENST00000463539 CERS3Q8IU89 383 aa22.52■■□□□ 1.2
CCDC78-206ENST00000463539 ZSCAN31Q96LW9 406 aaPredicted RBP22.52■■□□□ 1.2
CCDC78-206ENST00000463539 KIAA1551Q9HCM1 1747 aa22.51■■□□□ 1.19
CCDC78-206ENST00000463539 DDIT3P35638 169 aa22.51■■□□□ 1.19
CCDC78-206ENST00000463539 TOB2Q14106 344 aaPredicted RBP22.51■■□□□ 1.19
CCDC78-206ENST00000463539 Q6ZUG5 572 aa22.51■■□□□ 1.19
CCDC78-206ENST00000463539 CERS5Q8N5B7 392 aa22.51■■□□□ 1.19
CCDC78-206ENST00000463539 SH2B1Q9NRF2 756 aaPredicted RBP22.51■■□□□ 1.19
CCDC78-206ENST00000463539 PPP4CP60510 307 aa22.5■■□□□ 1.19
CCDC78-206ENST00000463539 EXOSC10Q01780 885 aaKnown RBP22.5■■□□□ 1.19
CCDC78-206ENST00000463539 ATP8A2Q9NTI2 1148 aa22.5■■□□□ 1.19
CCDC78-206ENST00000463539 CHMP5Q9NZZ3 219 aa22.5■■□□□ 1.19
CCDC78-206ENST00000463539 STRIP1Q5VSL9 837 aa22.5■■□□□ 1.19
CCDC78-206ENST00000463539 MB21D2Q8IYB1 491 aaPredicted RBP22.5■■□□□ 1.19
CCDC78-206ENST00000463539 FAM163AQ96GL9 167 aaPredicted RBP22.5■■□□□ 1.19
CCDC78-206ENST00000463539 INTS4Q96HW7 963 aaKnown RBP22.5■■□□□ 1.19
CCDC78-206ENST00000463539 TPCN1Q9ULQ1 816 aa22.5■■□□□ 1.19
CCDC78-206ENST00000463539 MCM5P33992 734 aa22.49■■□□□ 1.19
CCDC78-206ENST00000463539 BTDP43251 543 aa22.49■■□□□ 1.19
CCDC78-206ENST00000463539 CTDSPL2Q05D32 466 aa22.49■■□□□ 1.19
CCDC78-206ENST00000463539 PPARAQ07869 468 aa22.49■■□□□ 1.19
CCDC78-206ENST00000463539 SH3RF3Q8TEJ3 882 aaPredicted RBP22.49■■□□□ 1.19
CCDC78-206ENST00000463539 MXD3Q9BW11 206 aa22.49■■□□□ 1.19
CCDC78-206ENST00000463539 LRRC2Q9BYS8 371 aa22.49■■□□□ 1.19
CCDC78-206ENST00000463539 KCNQ5Q9NR82 932 aa22.49■■□□□ 1.19
CCDC78-206ENST00000463539 CIZ1Q9ULV3 898 aaPredicted RBP22.49■■□□□ 1.19
CCDC78-206ENST00000463539 GAKO14976 1311 aa22.49■■□□□ 1.19
CCDC78-206ENST00000463539 LAMA4Q16363 1823 aa22.49■■□□□ 1.19
CCDC78-206ENST00000463539 GOLGB1Q14789 3259 aaKnown RBP22.48■■□□□ 1.19
CCDC78-206ENST00000463539 GPR75-ASB3A0A0A6YYF3 556 aa22.48■■□□□ 1.19
CCDC78-206ENST00000463539 F8W031 263 aaPredicted RBP22.48■■□□□ 1.19
CCDC78-206ENST00000463539 AKNAD1Q5T1N1 836 aa22.48■■□□□ 1.19
CCDC78-206ENST00000463539 CWC22Q9HCG8 908 aaKnown RBP22.48■■□□□ 1.19
CCDC78-206ENST00000463539 DCP1AQ9NPI6 582 aaPredicted RBP22.48■■□□□ 1.19
CCDC78-206ENST00000463539 TTF2Q9UNY4 1162 aaKnown RBP22.48■■□□□ 1.19
CCDC78-206ENST00000463539 USP17L3A6NCW0 530 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 USP17L4A6NCW7 530 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 MINDY4BA8MYZ0 360 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 LARGE1O95461 756 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 CHST3Q7LGC8 479 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 USP17L1Q7RTZ2 530 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 NEDD4P46934 1319 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 TIAM2Q8IVF5 1701 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 CHD4Q14839 1912 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 PRC1O43663 620 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 PLCG2P16885 1265 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 USP5P45974 858 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 FKBP1AP62942 108 aaKnown RBP22.47■■□□□ 1.19
CCDC78-206ENST00000463539 ME3Q16798 604 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 DACT2Q5SW24 774 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 MFSD6Q6ZSS7 791 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 STAG1Q8WVM7 1258 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 BRF1Q92994 677 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 RNF41Q9H4P4 317 aaPredicted RBP22.47■■□□□ 1.19
CCDC78-206ENST00000463539 CNNM2Q9H8M5 875 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 ZNF277Q9NRM2 450 aaPredicted RBP22.47■■□□□ 1.19
CCDC78-206ENST00000463539 ANAPC4Q9UJX5 808 aa22.47■■□□□ 1.19
CCDC78-206ENST00000463539 LARGE2Q8N3Y3 721 aa22.46■■□□□ 1.19
CCDC78-206ENST00000463539 VPS33BQ9H267 617 aa22.46■■□□□ 1.19
CCDC78-206ENST00000463539 ARPP21Q9UBL0 812 aaPredicted RBP22.46■■□□□ 1.19
CCDC78-206ENST00000463539 WDR19Q8NEZ3 1342 aa22.46■■□□□ 1.19
CCDC78-206ENST00000463539 CTR9Q6PD62 1173 aa22.45■■□□□ 1.19
CCDC78-206ENST00000463539 AGXT2Q9BYV1 514 aa22.45■■□□□ 1.19
CCDC78-206ENST00000463539 DAGLAQ9Y4D2 1042 aa22.45■■□□□ 1.19
CCDC78-206ENST00000463539 USP17L12C9JPN9 530 aa22.45■■□□□ 1.18
CCDC78-206ENST00000463539 USP17L21D6R901 530 aa22.45■■□□□ 1.18
CCDC78-206ENST00000463539 FBXL16Q8N461 479 aa22.45■■□□□ 1.18
CCDC78-206ENST00000463539 KRT23Q9C075 422 aa22.45■■□□□ 1.18
CCDC78-206ENST00000463539 SPON1Q9HCB6 807 aa22.45■■□□□ 1.18
CCDC78-206ENST00000463539 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.45■■□□□ 1.18
CCDC78-206ENST00000463539 B4E1Z4 1266 aa22.44■■□□□ 1.18
CCDC78-206ENST00000463539 ANTXR2P58335 489 aa22.44■■□□□ 1.18
CCDC78-206ENST00000463539 CCDC83Q8IWF9 413 aa22.44■■□□□ 1.18
CCDC78-206ENST00000463539 CYP2D7A0A087X1C5 515 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 YDJCA8MPS7 323 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 TEX11Q8IYF3 940 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 TEKT1Q969V4 418 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 TAOK3Q9H2K8 898 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 INCENPQ9NQS7 918 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 TOMM22Q9NS69 142 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 MCM9Q9NXL9 1143 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 BCS1LQ9Y276 419 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 SCNN1DP51172 638 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 SBK1Q52WX2 424 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms