RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 AP3B2Q13367 1082 aa7.61□□□□□ -1.19
USH2A-203ENST00000463147 FAM168AQ92567 244 aa7.61□□□□□ -1.19
USH2A-203ENST00000463147 CCDC97Q96F63 343 aaPredicted RBP7.61□□□□□ -1.19
USH2A-203ENST00000463147 RC3H2Q9HBD1 1191 aaKnown RBP7.61□□□□□ -1.19
USH2A-203ENST00000463147 AOC2O75106 756 aa7.6□□□□□ -1.19
USH2A-203ENST00000463147 B3GALT4O96024 378 aa7.6□□□□□ -1.19
USH2A-203ENST00000463147 PRKCQQ04759 706 aa7.6□□□□□ -1.19
USH2A-203ENST00000463147 SPRED2Q7Z698 418 aa7.6□□□□□ -1.19
USH2A-203ENST00000463147 GJD3Q8N144 294 aa7.6□□□□□ -1.19
USH2A-203ENST00000463147 SERPINA10Q9UK55 444 aa7.6□□□□□ -1.19
USH2A-203ENST00000463147 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.6□□□□□ -1.19
USH2A-203ENST00000463147 CARMIL2Q6F5E8 1435 aa7.6□□□□□ -1.19
USH2A-203ENST00000463147 A0A1W2PP55 124 aa7.59□□□□□ -1.19
USH2A-203ENST00000463147 SLFN14P0C7P3 912 aa7.59□□□□□ -1.19
USH2A-203ENST00000463147 PDE3AQ14432 1141 aa7.59□□□□□ -1.19
USH2A-203ENST00000463147 ZNF574Q6ZN55 896 aaPredicted RBP7.59□□□□□ -1.19
USH2A-203ENST00000463147 GLIS3Q8NEA6 775 aa7.59□□□□□ -1.19
USH2A-203ENST00000463147 PI4K2BQ8TCG2 481 aa7.59□□□□□ -1.19
USH2A-203ENST00000463147 TCF12Q99081 682 aa7.59□□□□□ -1.19
USH2A-203ENST00000463147 ATXN3LQ9H3M9 355 aa7.59□□□□□ -1.19
USH2A-203ENST00000463147 PIDD1Q9HB75 910 aa7.59□□□□□ -1.19
USH2A-203ENST00000463147 CTSBP07858 339 aa7.58□□□□□ -1.2
USH2A-203ENST00000463147 GRIA4P48058 902 aa7.58□□□□□ -1.2
USH2A-203ENST00000463147 FKBP4Q02790 459 aaKnown RBP eCLIP7.58□□□□□ -1.2
USH2A-203ENST00000463147 PTPN12Q05209 780 aaKnown RBP7.58□□□□□ -1.2
USH2A-203ENST00000463147 FAM53CQ9NYF3 392 aa7.58□□□□□ -1.2
USH2A-203ENST00000463147 FZD6O60353 706 aa7.57□□□□□ -1.2
USH2A-203ENST00000463147 SSFA2P28290 1259 aa7.57□□□□□ -1.2
USH2A-203ENST00000463147 ZNF124Q15973 351 aa7.57□□□□□ -1.2
USH2A-203ENST00000463147 IFI16Q16666 785 aaKnown RBP7.57□□□□□ -1.2
USH2A-203ENST00000463147 KIAA0319Q5VV43 1072 aa7.57□□□□□ -1.2
USH2A-203ENST00000463147 ARHGAP27Q6ZUM4 889 aa7.57□□□□□ -1.2
USH2A-203ENST00000463147 WFDC3Q8IUB2 231 aa7.57□□□□□ -1.2
USH2A-203ENST00000463147 FAM84AQ96KN4 292 aa7.57□□□□□ -1.2
USH2A-203ENST00000463147 TRIM56Q9BRZ2 755 aaKnown RBP7.57□□□□□ -1.2
USH2A-203ENST00000463147 WDR18Q9BV38 432 aa7.57□□□□□ -1.2
USH2A-203ENST00000463147 TMEM265A0A087WTH1 108 aa7.56□□□□□ -1.2
USH2A-203ENST00000463147 DYNC1LI2O43237 492 aaPredicted RBP7.56□□□□□ -1.2
USH2A-203ENST00000463147 CD8BP10966 210 aa7.56□□□□□ -1.2
USH2A-203ENST00000463147 ITPKAP23677 461 aa7.56□□□□□ -1.2
USH2A-203ENST00000463147 BNIP3Q12983 259 aa7.56□□□□□ -1.2
USH2A-203ENST00000463147 SPRED3Q2MJR0 410 aa7.56□□□□□ -1.2
USH2A-203ENST00000463147 HRASLS5Q96KN8 279 aa7.56□□□□□ -1.2
USH2A-203ENST00000463147 ZNF576Q9H609 170 aa7.56□□□□□ -1.2
USH2A-203ENST00000463147 POLR3DP05423 398 aaPredicted RBP7.55□□□□□ -1.2
USH2A-203ENST00000463147 RNASE1P07998 156 aaKnown RBP7.55□□□□□ -1.2
USH2A-203ENST00000463147 FAM87AP0C7U9 286 aa7.55□□□□□ -1.2
USH2A-203ENST00000463147 RPS26P11Q5JNZ5 115 aaPredicted RBP7.55□□□□□ -1.2
USH2A-203ENST00000463147 ANGEL2Q5VTE6 544 aaKnown RBP7.55□□□□□ -1.2
USH2A-203ENST00000463147 SPOCD1Q6ZMY3 1216 aa7.55□□□□□ -1.2
USH2A-203ENST00000463147 PLD6Q8N2A8 252 aaKnown RBP7.55□□□□□ -1.2
USH2A-203ENST00000463147 CCDC82Q8N4S0 544 aa7.55□□□□□ -1.2
USH2A-203ENST00000463147 MBNL3Q9NUK0 354 aaKnown RBP7.55□□□□□ -1.2
USH2A-203ENST00000463147 MTMR3Q13615 1198 aa7.54□□□□□ -1.2
USH2A-203ENST00000463147 SLC23A3Q6PIS1 610 aa7.54□□□□□ -1.2
USH2A-203ENST00000463147 CRIM1Q9NZV1 1036 aa7.54□□□□□ -1.2
USH2A-203ENST00000463147 PPP1R9AQ9ULJ8 1098 aa7.54□□□□□ -1.2
USH2A-203ENST00000463147 TMPRSS2O15393 492 aa7.53□□□□□ -1.2
USH2A-203ENST00000463147 ID3Q02535 119 aa7.53□□□□□ -1.2
USH2A-203ENST00000463147 AOC3Q16853 763 aa7.53□□□□□ -1.2
USH2A-203ENST00000463147 SMYD4Q8IYR2 804 aaPredicted RBP7.53□□□□□ -1.2
USH2A-203ENST00000463147 EHD4Q9H223 541 aa7.53□□□□□ -1.2
USH2A-203ENST00000463147 LGR6Q9HBX8 967 aa7.53□□□□□ -1.2
USH2A-203ENST00000463147 KRT82Q9NSB4 513 aa7.53□□□□□ -1.2
USH2A-203ENST00000463147 SNX11Q9Y5W9 270 aa7.53□□□□□ -1.2
USH2A-203ENST00000463147 LRRN4CLQ8ND94 238 aa7.52□□□□□ -1.21
USH2A-203ENST00000463147 FLAD1Q8NFF5 587 aa7.52□□□□□ -1.21
USH2A-203ENST00000463147 TOX2Q96NM4 488 aa7.52□□□□□ -1.21
USH2A-203ENST00000463147 FANCD2OSQ96PS1 177 aa7.52□□□□□ -1.21
USH2A-203ENST00000463147 PCOLCE2Q9UKZ9 415 aa7.52□□□□□ -1.21
USH2A-203ENST00000463147 ECEL1O95672 775 aa7.51□□□□□ -1.21
USH2A-203ENST00000463147 CEACAM5P06731 702 aa7.51□□□□□ -1.21
USH2A-203ENST00000463147 CDK5R2Q13319 367 aa7.51□□□□□ -1.21
USH2A-203ENST00000463147 PPP1R16BQ96T49 567 aa7.51□□□□□ -1.21
USH2A-203ENST00000463147 CCDC87Q9NVE4 849 aa7.51□□□□□ -1.21
USH2A-203ENST00000463147 LRRC10BA6NIK2 292 aa7.5□□□□□ -1.21
USH2A-203ENST00000463147 ZSWIM9Q86XI8 627 aa7.5□□□□□ -1.21
USH2A-203ENST00000463147 FAM181AQ8N9Y4 354 aa7.5□□□□□ -1.21
USH2A-203ENST00000463147 CPNE3O75131 537 aaKnown RBP7.49□□□□□ -1.21
USH2A-203ENST00000463147 PPP1R15AO75807 674 aaPredicted RBP7.49□□□□□ -1.21
USH2A-203ENST00000463147 PDE3BQ13370 1112 aa7.49□□□□□ -1.21
USH2A-203ENST00000463147 KIF4BQ2VIQ3 1234 aa7.49□□□□□ -1.21
USH2A-203ENST00000463147 PRPF40BQ6NWY9 871 aaKnown RBP7.49□□□□□ -1.21
USH2A-203ENST00000463147 ZSCAN18Q8TBC5 510 aaPredicted RBP7.49□□□□□ -1.21
USH2A-203ENST00000463147 ASB11Q8WXH4 323 aa7.49□□□□□ -1.21
USH2A-203ENST00000463147 ADAMTS6Q9UKP5 1117 aa7.49□□□□□ -1.21
USH2A-203ENST00000463147 BRPF3Q9ULD4 1205 aa7.49□□□□□ -1.21
USH2A-203ENST00000463147 TRAK1Q9UPV9 953 aa7.49□□□□□ -1.21
USH2A-203ENST00000463147 RNGTTO60942 597 aaKnown RBP7.48□□□□□ -1.21
USH2A-203ENST00000463147 ABL1P00519 1130 aa7.48□□□□□ -1.21
USH2A-203ENST00000463147 LIG1P18858 919 aa7.48□□□□□ -1.21
USH2A-203ENST00000463147 RAP1GAPP47736 663 aa7.48□□□□□ -1.21
USH2A-203ENST00000463147 OXCT1P55809 520 aa7.48□□□□□ -1.21
USH2A-203ENST00000463147 MESP2Q0VG99 397 aa7.48□□□□□ -1.21
USH2A-203ENST00000463147 LCE4AQ5TA78 99 aa7.48□□□□□ -1.21
USH2A-203ENST00000463147 DUSP23Q9BVJ7 150 aa7.48□□□□□ -1.21
USH2A-203ENST00000463147 TMEM88BA6NKF7 163 aa7.47□□□□□ -1.21
USH2A-203ENST00000463147 PPP2R3AQ06190 1150 aa7.47□□□□□ -1.21
USH2A-203ENST00000463147 KCNMB1Q16558 191 aa7.47□□□□□ -1.21
USH2A-203ENST00000463147 TNKS2Q9H2K2 1166 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms