RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 SPDYE2Q495Y8 402 aa23.25■■□□□ 1.31
XPA-202ENST00000462523 ANGEL2Q5VTE6 544 aaKnown RBP23.25■■□□□ 1.31
XPA-202ENST00000462523 CDC42EP5Q6NZY7 148 aa23.25■■□□□ 1.31
XPA-202ENST00000462523 ZC3H15Q8WU90 426 aaKnown RBP23.25■■□□□ 1.31
XPA-202ENST00000462523 RILPL2Q969X0 211 aa23.25■■□□□ 1.31
XPA-202ENST00000462523 SCAF8Q9UPN6 1271 aaKnown RBP23.25■■□□□ 1.31
XPA-202ENST00000462523 LDHCP07864 332 aa23.24■■□□□ 1.31
XPA-202ENST00000462523 SDSP20132 328 aa23.24■■□□□ 1.31
XPA-202ENST00000462523 RHBDL3P58872 404 aa23.24■■□□□ 1.31
XPA-202ENST00000462523 UBE3CQ15386 1083 aa23.24■■□□□ 1.31
XPA-202ENST00000462523 TMED8Q6PL24 325 aaPredicted RBP23.24■■□□□ 1.31
XPA-202ENST00000462523 CNTROBQ8N137 903 aa23.24■■□□□ 1.31
XPA-202ENST00000462523 AATFQ9NY61 560 aaKnown RBP eCLIP23.24■■□□□ 1.31
XPA-202ENST00000462523 ZNF70Q9UC06 446 aaPredicted RBP23.24■■□□□ 1.31
XPA-202ENST00000462523 RNF113AO15541 343 aaKnown RBP23.23■■□□□ 1.31
XPA-202ENST00000462523 CACNB3P54284 484 aa23.23■■□□□ 1.31
XPA-202ENST00000462523 MIGA1Q8NAN2 632 aa23.23■■□□□ 1.31
XPA-202ENST00000462523 DYNLL1P63167 89 aaKnown RBP23.23■■□□□ 1.31
XPA-202ENST00000462523 MAP1SQ66K74 1059 aaPredicted RBP23.23■■□□□ 1.31
XPA-202ENST00000462523 RIOK1Q9BRS2 568 aaKnown RBP23.23■■□□□ 1.31
XPA-202ENST00000462523 CLEC11AQ9Y240 323 aa23.23■■□□□ 1.31
XPA-202ENST00000462523 RFX7Q2KHR2 1363 aa23.23■■□□□ 1.31
XPA-202ENST00000462523 FOCADQ5VW36 1801 aa23.22■■□□□ 1.31
XPA-202ENST00000462523 PPP4CP60510 307 aa23.22■■□□□ 1.31
XPA-202ENST00000462523 ZSCAN25Q6NSZ9 544 aa23.22■■□□□ 1.31
XPA-202ENST00000462523 PUS7LQ9H0K6 701 aaKnown RBP23.22■■□□□ 1.31
XPA-202ENST00000462523 USP40Q9NVE5 1235 aa23.22■■□□□ 1.31
XPA-202ENST00000462523 PITPNM2Q9BZ72 1349 aa23.21■■□□□ 1.31
XPA-202ENST00000462523 MYO1BO43795 1136 aa23.21■■□□□ 1.31
XPA-202ENST00000462523 SH3RF3Q8TEJ3 882 aaPredicted RBP23.21■■□□□ 1.31
XPA-202ENST00000462523 OSBP2Q969R2 916 aa23.21■■□□□ 1.31
XPA-202ENST00000462523 ZFYP08048 801 aaPredicted RBP23.2■■□□□ 1.3
XPA-202ENST00000462523 NFIAQ12857 509 aa23.2■■□□□ 1.3
XPA-202ENST00000462523 DLK2Q6UY11 383 aa23.2■■□□□ 1.3
XPA-202ENST00000462523 WDHD1O75717 1129 aaPredicted RBP23.19■■□□□ 1.3
XPA-202ENST00000462523 TOMM70O94826 608 aa23.19■■□□□ 1.3
XPA-202ENST00000462523 BMP2KLQ5H9B9 411 aa23.19■■□□□ 1.3
XPA-202ENST00000462523 CHADLQ6NUI6 762 aa23.19■■□□□ 1.3
XPA-202ENST00000462523 APPBP2Q92624 585 aa23.19■■□□□ 1.3
XPA-202ENST00000462523 SEC62Q99442 399 aaKnown RBP23.19■■□□□ 1.3
XPA-202ENST00000462523 VEZTQ9HBM0 779 aa23.19■■□□□ 1.3
XPA-202ENST00000462523 CNTNAP1P78357 1384 aa23.19■■□□□ 1.3
XPA-202ENST00000462523 ZMYM1Q5SVZ6 1142 aa23.18■■□□□ 1.3
XPA-202ENST00000462523 LCORLQ8N3X6 602 aa23.18■■□□□ 1.3
XPA-202ENST00000462523 DDX4Q9NQI0 724 aaKnown RBP23.18■■□□□ 1.3
XPA-202ENST00000462523 MAGEB6P1A0A0J9YX57 407 aa23.18■■□□□ 1.3
XPA-202ENST00000462523 TCP10L2B9ZVM9 353 aa23.18■■□□□ 1.3
XPA-202ENST00000462523 ADM5C9JUS6 153 aa23.18■■□□□ 1.3
XPA-202ENST00000462523 M0R2C6 588 aa23.18■■□□□ 1.3
XPA-202ENST00000462523 BAG3O95817 575 aa23.18■■□□□ 1.3
XPA-202ENST00000462523 RBM46Q8TBY0 533 aaKnown RBP23.18■■□□□ 1.3
XPA-202ENST00000462523 DCPSQ96C86 337 aaKnown RBP23.18■■□□□ 1.3
XPA-202ENST00000462523 FAM227BQ96M60 508 aa23.18■■□□□ 1.3
XPA-202ENST00000462523 GLIS2Q9BZE0 524 aaPredicted RBP23.18■■□□□ 1.3
XPA-202ENST00000462523 FAM198AQ9UFP1 575 aa23.18■■□□□ 1.3
XPA-202ENST00000462523 A0A0D9SFI3 127 aa23.17■■□□□ 1.3
XPA-202ENST00000462523 MBD4O95243 580 aa23.17■■□□□ 1.3
XPA-202ENST00000462523 KRT26Q7Z3Y9 468 aa23.17■■□□□ 1.3
XPA-202ENST00000462523 TICAM2Q86XR7 235 aa23.17■■□□□ 1.3
XPA-202ENST00000462523 IDI2Q9BXS1 227 aa23.17■■□□□ 1.3
XPA-202ENST00000462523 ARMT1Q9H993 441 aa23.17■■□□□ 1.3
XPA-202ENST00000462523 ITGBL1O95965 494 aaPredicted RBP23.16■■□□□ 1.3
XPA-202ENST00000462523 FMR1Q06787 632 aaKnown RBP eCLIP23.16■■□□□ 1.3
XPA-202ENST00000462523 LRRFIP1Q32MZ4 808 aaKnown RBP23.16■■□□□ 1.3
XPA-202ENST00000462523 USP48Q86UV5 1035 aa23.16■■□□□ 1.3
XPA-202ENST00000462523 APOBEC3FQ8IUX4 373 aaKnown RBP23.16■■□□□ 1.3
XPA-202ENST00000462523 NOL10Q9BSC4 688 aaKnown RBP23.16■■□□□ 1.3
XPA-202ENST00000462523 NMIQ13287 307 aaPredicted RBP23.15■■□□□ 1.3
XPA-202ENST00000462523 FKBP1CQ5VVH2 108 aa23.15■■□□□ 1.3
XPA-202ENST00000462523 CDAN1Q8IWY9 1227 aa23.15■■□□□ 1.3
XPA-202ENST00000462523 ZFPM1Q8IX07 1006 aa23.15■■□□□ 1.3
XPA-202ENST00000462523 TEX11Q8IYF3 940 aa23.15■■□□□ 1.3
XPA-202ENST00000462523 DEFB129Q9H1M3 183 aa23.15■■□□□ 1.3
XPA-202ENST00000462523 DDX60LQ5H9U9 1706 aaKnown RBP23.15■■□□□ 1.3
XPA-202ENST00000462523 TRAF5O00463 557 aa23.14■■□□□ 1.3
XPA-202ENST00000462523 PLCG2P16885 1265 aa23.14■■□□□ 1.3
XPA-202ENST00000462523 RASA3Q14644 834 aa23.14■■□□□ 1.3
XPA-202ENST00000462523 PRAMEF18Q5VWM3 479 aa23.14■■□□□ 1.3
XPA-202ENST00000462523 CDC37L1Q7L3B6 337 aa23.14■■□□□ 1.3
XPA-202ENST00000462523 SULF1Q8IWU6 871 aa23.14■■□□□ 1.3
XPA-202ENST00000462523 SMC1BQ8NDV3 1235 aa23.14■■□□□ 1.3
XPA-202ENST00000462523 TMOD2Q9NZR1 351 aa23.14■■□□□ 1.3
XPA-202ENST00000462523 TCP10Q12799 353 aa23.14■■□□□ 1.29
XPA-202ENST00000462523 CCDC129Q6ZRS4 1044 aa23.14■■□□□ 1.29
XPA-202ENST00000462523 IL25Q9H293 177 aa23.14■■□□□ 1.29
XPA-202ENST00000462523 GPAA1O43292 621 aa23.13■■□□□ 1.29
XPA-202ENST00000462523 PRKAB2O43741 272 aa23.13■■□□□ 1.29
XPA-202ENST00000462523 CHMLP26374 656 aa23.13■■□□□ 1.29
XPA-202ENST00000462523 PICALMQ13492 652 aa23.13■■□□□ 1.29
XPA-202ENST00000462523 FAM83AQ86UY5 434 aa23.13■■□□□ 1.29
XPA-202ENST00000462523 CERS3Q8IU89 383 aa23.13■■□□□ 1.29
XPA-202ENST00000462523 TGFBRAP1Q8WUH2 860 aa23.13■■□□□ 1.29
XPA-202ENST00000462523 AIDAQ96BJ3 306 aa23.13■■□□□ 1.29
XPA-202ENST00000462523 TEPSINQ96N21 525 aa23.13■■□□□ 1.29
XPA-202ENST00000462523 STRBPQ96SI9 672 aaKnown RBP23.13■■□□□ 1.29
XPA-202ENST00000462523 TMEM39BQ9GZU3 492 aa23.13■■□□□ 1.29
XPA-202ENST00000462523 FLT1P17948 1338 aa23.12■■□□□ 1.29
XPA-202ENST00000462523 TNFAIP1Q13829 316 aa23.12■■□□□ 1.29
XPA-202ENST00000462523 ZNF589Q86UQ0 364 aaPredicted RBP23.12■■□□□ 1.29
XPA-202ENST00000462523 NAV1Q8NEY1 1877 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 363.3 ms