RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 TXNDC2Q86VQ3 553 aa7.56□□□□□ -1.2
COL21A1-205ENST00000461489 ARID3AQ99856 593 aa7.56□□□□□ -1.2
COL21A1-205ENST00000461489 WDR18Q9BV38 432 aa7.56□□□□□ -1.2
COL21A1-205ENST00000461489 LGR6Q9HBX8 967 aa7.56□□□□□ -1.2
COL21A1-205ENST00000461489 TRAK1Q9UPV9 953 aa7.56□□□□□ -1.2
COL21A1-205ENST00000461489 ZNF157P51786 506 aaPredicted RBP7.55□□□□□ -1.2
COL21A1-205ENST00000461489 RPS26P11Q5JNZ5 115 aaPredicted RBP7.55□□□□□ -1.2
COL21A1-205ENST00000461489 FLCNQ8NFG4 579 aa7.55□□□□□ -1.2
COL21A1-205ENST00000461489 ZC3H12CQ9C0D7 883 aaKnown RBP7.55□□□□□ -1.2
COL21A1-205ENST00000461489 GSX1Q9H4S2 264 aaPredicted RBP7.55□□□□□ -1.2
COL21A1-205ENST00000461489 PPP1R9AQ9ULJ8 1098 aa7.55□□□□□ -1.2
COL21A1-205ENST00000461489 DYNC1LI2O43237 492 aaPredicted RBP7.54□□□□□ -1.2
COL21A1-205ENST00000461489 LIG1P18858 919 aa7.54□□□□□ -1.2
COL21A1-205ENST00000461489 NFXL1Q6ZNB6 911 aa7.54□□□□□ -1.2
COL21A1-205ENST00000461489 DMRTB1Q96MA1 342 aa7.54□□□□□ -1.2
COL21A1-205ENST00000461489 CSRNP1Q96S65 589 aa7.54□□□□□ -1.2
COL21A1-205ENST00000461489 PIDD1Q9HB75 910 aa7.54□□□□□ -1.2
COL21A1-205ENST00000461489 ZC3H7BQ9UGR2 993 aaKnown RBP7.54□□□□□ -1.2
COL21A1-205ENST00000461489 SYNGAP1Q96PV0 1343 aa7.53□□□□□ -1.2
COL21A1-205ENST00000461489 BTBD11A6QL63 1104 aa7.53□□□□□ -1.2
COL21A1-205ENST00000461489 HNRNPUQ00839 825 aaKnown RBP eCLIP7.53□□□□□ -1.2
COL21A1-205ENST00000461489 FAAP100Q0VG06 881 aa7.53□□□□□ -1.2
COL21A1-205ENST00000461489 GRM2Q14416 872 aa7.53□□□□□ -1.2
COL21A1-205ENST00000461489 SEZ6L2Q6UXD5 910 aa7.53□□□□□ -1.2
COL21A1-205ENST00000461489 RETREG2Q8NC44 543 aa7.53□□□□□ -1.2
COL21A1-205ENST00000461489 CCER1Q8TC90 406 aaPredicted RBP7.53□□□□□ -1.2
COL21A1-205ENST00000461489 EPS8L3Q8TE67 593 aaKnown RBP7.53□□□□□ -1.2
COL21A1-205ENST00000461489 CCDC86Q9H6F5 360 aaKnown RBP7.53□□□□□ -1.2
COL21A1-205ENST00000461489 C1GALT1Q9NS00 363 aa7.53□□□□□ -1.2
COL21A1-205ENST00000461489 TMPRSS2O15393 492 aa7.52□□□□□ -1.21
COL21A1-205ENST00000461489 IGHA2P01877 340 aa7.52□□□□□ -1.21
COL21A1-205ENST00000461489 SLFN14P0C7P3 912 aa7.52□□□□□ -1.21
COL21A1-205ENST00000461489 YBX3P16989 372 aaKnown RBP eCLIP7.52□□□□□ -1.21
COL21A1-205ENST00000461489 PDE4CQ08493 712 aa7.52□□□□□ -1.21
COL21A1-205ENST00000461489 OGFOD3Q6PK18 319 aa7.52□□□□□ -1.21
COL21A1-205ENST00000461489 DTHD1Q6ZMT9 781 aa7.52□□□□□ -1.21
COL21A1-205ENST00000461489 AGBL5Q8NDL9 886 aa7.52□□□□□ -1.21
COL21A1-205ENST00000461489 GLIS3Q8NEA6 775 aa7.52□□□□□ -1.21
COL21A1-205ENST00000461489 WDR89Q96FK6 387 aaPredicted RBP7.52□□□□□ -1.21
COL21A1-205ENST00000461489 FCGRTP55899 365 aa7.51□□□□□ -1.21
COL21A1-205ENST00000461489 ID3Q02535 119 aa7.51□□□□□ -1.21
COL21A1-205ENST00000461489 CYP27C1Q4G0S4 372 aa7.51□□□□□ -1.21
COL21A1-205ENST00000461489 ALKBH8Q96BT7 664 aaKnown RBP7.51□□□□□ -1.21
COL21A1-205ENST00000461489 RBCK1Q9BYM8 510 aa7.51□□□□□ -1.21
COL21A1-205ENST00000461489 ATXN3LQ9H3M9 355 aa7.51□□□□□ -1.21
COL21A1-205ENST00000461489 NLRP2Q9NX02 1062 aa7.51□□□□□ -1.21
COL21A1-205ENST00000461489 PPP4R2Q9NY27 417 aa7.51□□□□□ -1.21
COL21A1-205ENST00000461489 CRIM1Q9NZV1 1036 aa7.51□□□□□ -1.21
COL21A1-205ENST00000461489 GPN3Q9UHW5 284 aaPredicted RBP7.51□□□□□ -1.21
COL21A1-205ENST00000461489 GSTP1P09211 210 aaKnown RBP7.5□□□□□ -1.21
COL21A1-205ENST00000461489 PPP2R3AQ06190 1150 aa7.5□□□□□ -1.21
COL21A1-205ENST00000461489 CBLL1Q75N03 491 aa7.5□□□□□ -1.21
COL21A1-205ENST00000461489 PAK6Q9NQU5 681 aaPredicted RBP7.5□□□□□ -1.21
COL21A1-205ENST00000461489 ZNF862O60290 1169 aa7.49□□□□□ -1.21
COL21A1-205ENST00000461489 CDK5R2Q13319 367 aa7.49□□□□□ -1.21
COL21A1-205ENST00000461489 FANCD2OSQ96PS1 177 aa7.49□□□□□ -1.21
COL21A1-205ENST00000461489 KRT82Q9NSB4 513 aa7.49□□□□□ -1.21
COL21A1-205ENST00000461489 SLC5A6Q9Y289 635 aa7.49□□□□□ -1.21
COL21A1-205ENST00000461489 SOWAHDA6NJG2 315 aa7.48□□□□□ -1.21
COL21A1-205ENST00000461489 RNGTTO60942 597 aaKnown RBP7.48□□□□□ -1.21
COL21A1-205ENST00000461489 FAM87AP0C7U9 286 aa7.48□□□□□ -1.21
COL21A1-205ENST00000461489 KIF4BQ2VIQ3 1234 aa7.48□□□□□ -1.21
COL21A1-205ENST00000461489 SMYD4Q8IYR2 804 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-205ENST00000461489 KCNB2Q92953 911 aa7.48□□□□□ -1.21
COL21A1-205ENST00000461489 TMEM39AQ9NV64 488 aa7.48□□□□□ -1.21
COL21A1-205ENST00000461489 BIN2Q9UBW5 565 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-205ENST00000461489 COL19A1Q14993 1142 aa7.47□□□□□ -1.21
COL21A1-205ENST00000461489 PI16Q6UXB8 463 aa7.47□□□□□ -1.21
COL21A1-205ENST00000461489 TMC7Q7Z402 723 aa7.47□□□□□ -1.21
COL21A1-205ENST00000461489 STK11IPQ8N1F8 1099 aa7.47□□□□□ -1.21
COL21A1-205ENST00000461489 BCL7CQ8WUZ0 217 aaPredicted RBP7.47□□□□□ -1.21
COL21A1-205ENST00000461489 ASIC4Q96FT7 647 aa7.47□□□□□ -1.21
COL21A1-205ENST00000461489 DISC1Q9NRI5 854 aa7.47□□□□□ -1.21
COL21A1-205ENST00000461489 XRCC5P13010 732 aaKnown RBP7.46□□□□□ -1.22
COL21A1-205ENST00000461489 HCLS1P14317 486 aaPredicted RBP7.46□□□□□ -1.22
COL21A1-205ENST00000461489 TTLL4Q14679 1199 aa7.46□□□□□ -1.22
COL21A1-205ENST00000461489 ZNF574Q6ZN55 896 aaPredicted RBP7.46□□□□□ -1.22
COL21A1-205ENST00000461489 KRTAP9-9Q9BYP9 154 aa7.46□□□□□ -1.22
COL21A1-205ENST00000461489 KRTAP9-4Q9BYQ2 154 aa7.46□□□□□ -1.22
COL21A1-205ENST00000461489 BCO2Q9BYV7 579 aa7.46□□□□□ -1.22
COL21A1-205ENST00000461489 AKAP2Q9Y2D5 859 aa7.46□□□□□ -1.22
COL21A1-205ENST00000461489 SUPT5HO00267 1087 aaKnown RBP7.45□□□□□ -1.22
COL21A1-205ENST00000461489 JUNBP17275 347 aaPredicted RBP7.45□□□□□ -1.22
COL21A1-205ENST00000461489 ITGB5P18084 799 aa7.45□□□□□ -1.22
COL21A1-205ENST00000461489 PLCL1Q15111 1095 aa7.45□□□□□ -1.22
COL21A1-205ENST00000461489 SULF2Q8IWU5 870 aa7.45□□□□□ -1.22
COL21A1-205ENST00000461489 FAM181AQ8N9Y4 354 aa7.45□□□□□ -1.22
COL21A1-205ENST00000461489 DCTN4Q9UJW0 460 aa7.45□□□□□ -1.22
COL21A1-205ENST00000461489 PCDHGC5Q9Y5F6 944 aa7.45□□□□□ -1.22
COL21A1-205ENST00000461489 ARHGAP27Q6ZUM4 889 aa7.44□□□□□ -1.22
COL21A1-205ENST00000461489 PDZD3Q86UT5 571 aa7.44□□□□□ -1.22
COL21A1-205ENST00000461489 PLD6Q8N2A8 252 aaKnown RBP7.44□□□□□ -1.22
COL21A1-205ENST00000461489 NETO1Q8TDF5 533 aa7.44□□□□□ -1.22
COL21A1-205ENST00000461489 MISP3Q96FF7 219 aa7.44□□□□□ -1.22
COL21A1-205ENST00000461489 SSU72Q9NP77 194 aaKnown RBP7.44□□□□□ -1.22
COL21A1-205ENST00000461489 PCOLCE2Q9UKZ9 415 aa7.44□□□□□ -1.22
COL21A1-205ENST00000461489 PNMA6FA0A0J9YX94 578 aa7.43□□□□□ -1.22
COL21A1-205ENST00000461489 ARNTP27540 789 aa7.43□□□□□ -1.22
COL21A1-205ENST00000461489 BNIP3Q12983 259 aa7.43□□□□□ -1.22
COL21A1-205ENST00000461489 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms