RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 USP42Q9H9J4 1324 aaKnown RBP9.05□□□□□ -0.96
NUP50-212ENST00000461194 TJP1Q07157 1748 aa9.05□□□□□ -0.96
NUP50-212ENST00000461194 POTECB2RU33 542 aa9.05□□□□□ -0.96
NUP50-212ENST00000461194 CDK2AP1O14519 115 aa9.05□□□□□ -0.96
NUP50-212ENST00000461194 SNRPA1P09661 255 aaKnown RBP9.05□□□□□ -0.96
NUP50-212ENST00000461194 CANXP27824 592 aaKnown RBP9.05□□□□□ -0.96
NUP50-212ENST00000461194 GPC1P35052 558 aa9.05□□□□□ -0.96
NUP50-212ENST00000461194 EIF5P55010 431 aaKnown RBP9.05□□□□□ -0.96
NUP50-212ENST00000461194 LMOD3Q0VAK6 560 aa9.05□□□□□ -0.96
NUP50-212ENST00000461194 CCDC146Q8IYE0 955 aa9.05□□□□□ -0.96
NUP50-212ENST00000461194 NLGN2Q8NFZ4 835 aa9.05□□□□□ -0.96
NUP50-212ENST00000461194 RNF217Q8TC41 542 aa9.05□□□□□ -0.96
NUP50-212ENST00000461194 THUMPD2Q9BTF0 503 aaKnown RBP9.05□□□□□ -0.96
NUP50-212ENST00000461194 SRP68Q9UHB9 627 aaKnown RBP9.05□□□□□ -0.96
NUP50-212ENST00000461194 COL15A1P39059 1388 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 A0A087WZG4 1122 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 SOBPA7XYQ1 873 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 ANP32CO43423 234 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 IL6STP40189 918 aaPredicted RBP9.04□□□□□ -0.96
NUP50-212ENST00000461194 POU4F2Q12837 409 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 USPL1Q5W0Q7 1092 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 LYSMD3Q7Z3D4 306 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 PRIMPOLQ96LW4 560 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 MIS18AQ9NYP9 233 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 SCHIP1Q9P0W5 487 aaPredicted RBP9.04□□□□□ -0.96
NUP50-212ENST00000461194 NARFQ9UHQ1 456 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 USP16Q9Y5T5 823 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 MYH14Q7Z406 1995 aaKnown RBP9.04□□□□□ -0.96
NUP50-212ENST00000461194 UBR2Q8IWV8 1755 aa9.04□□□□□ -0.96
NUP50-212ENST00000461194 PRAMEF22A3QJZ6 481 aa9.03□□□□□ -0.96
NUP50-212ENST00000461194 A1BGP04217 495 aa9.03□□□□□ -0.96
NUP50-212ENST00000461194 SNRPBP14678 240 aaKnown RBP9.03□□□□□ -0.96
NUP50-212ENST00000461194 PHKA2P46019 1235 aa9.03□□□□□ -0.96
NUP50-212ENST00000461194 EPHA4P54764 986 aa9.03□□□□□ -0.96
NUP50-212ENST00000461194 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
NUP50-212ENST00000461194 KIFC2Q96AC6 838 aa9.03□□□□□ -0.96
NUP50-212ENST00000461194 TRIM47Q96LD4 638 aa9.03□□□□□ -0.96
NUP50-212ENST00000461194 TSPAN10Q9H1Z9 355 aaPredicted RBP9.03□□□□□ -0.96
NUP50-212ENST00000461194 BABAM1Q9NWV8 329 aa9.03□□□□□ -0.96
NUP50-212ENST00000461194 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
NUP50-212ENST00000461194 RRP7AQ9Y3A4 280 aaKnown RBP9.03□□□□□ -0.96
NUP50-212ENST00000461194 SIPA1L3O60292 1781 aaPredicted RBP9.03□□□□□ -0.96
NUP50-212ENST00000461194 TMEM88BA6NKF7 163 aa9.02□□□□□ -0.97
NUP50-212ENST00000461194 PRMT3O60678 531 aa9.02□□□□□ -0.97
NUP50-212ENST00000461194 RHOQP17081 205 aa9.02□□□□□ -0.97
NUP50-212ENST00000461194 TM4SF1P30408 202 aa9.02□□□□□ -0.97
NUP50-212ENST00000461194 EIF4A1P60842 406 aaKnown RBP9.02□□□□□ -0.97
NUP50-212ENST00000461194 MTFR1Q15390 333 aa9.02□□□□□ -0.97
NUP50-212ENST00000461194 CCDC184Q52MB2 194 aa9.02□□□□□ -0.97
NUP50-212ENST00000461194 GNASQ5JWF2 1037 aa9.02□□□□□ -0.97
NUP50-212ENST00000461194 SLC9A9Q8IVB4 645 aa9.02□□□□□ -0.97
NUP50-212ENST00000461194 PARP3Q9Y6F1 533 aa9.02□□□□□ -0.97
NUP50-212ENST00000461194 USP3Q9Y6I4 520 aa9.02□□□□□ -0.97
NUP50-212ENST00000461194 VIRMAQ69YN4 1812 aaKnown RBP9.02□□□□□ -0.97
NUP50-212ENST00000461194 POLRMTO00411 1230 aaKnown RBP9.01□□□□□ -0.97
NUP50-212ENST00000461194 FOXK2Q01167 660 aa9.01□□□□□ -0.97
NUP50-212ENST00000461194 DDR1Q08345 913 aa9.01□□□□□ -0.97
NUP50-212ENST00000461194 GPR162Q16538 588 aa9.01□□□□□ -0.97
NUP50-212ENST00000461194 SWI5Q1ZZU3 235 aa9.01□□□□□ -0.97
NUP50-212ENST00000461194 NPM2Q86SE8 214 aaKnown RBP9.01□□□□□ -0.97
NUP50-212ENST00000461194 TSPYL4Q9UJ04 414 aa9.01□□□□□ -0.97
NUP50-212ENST00000461194 C10orf71Q711Q0 1435 aa9□□□□□ -0.97
NUP50-212ENST00000461194 APAF1O14727 1248 aa9□□□□□ -0.97
NUP50-212ENST00000461194 PPP1R12BO60237 982 aaPredicted RBP9□□□□□ -0.97
NUP50-212ENST00000461194 TGFB2P61812 414 aa9□□□□□ -0.97
NUP50-212ENST00000461194 PDE4CQ08493 712 aa9□□□□□ -0.97
NUP50-212ENST00000461194 NFIXQ14938 502 aa9□□□□□ -0.97
NUP50-212ENST00000461194 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9□□□□□ -0.97
NUP50-212ENST00000461194 NBPF10Q6P3W6 841 aaKnown RBP9□□□□□ -0.97
NUP50-212ENST00000461194 NBPF15Q8N660 670 aa9□□□□□ -0.97
NUP50-212ENST00000461194 NIFKQ9BYG3 293 aaKnown RBP9□□□□□ -0.97
NUP50-212ENST00000461194 IQSEC3Q9UPP2 1182 aaPredicted RBP9□□□□□ -0.97
NUP50-212ENST00000461194 UTRNP46939 3433 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 CHL1O00533 1208 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 GRIN3BO60391 1043 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 CAMTA2O94983 1202 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 YBX3P16989 372 aaKnown RBP eCLIP8.99□□□□□ -0.97
NUP50-212ENST00000461194 PIP4K2AP48426 406 aaPredicted RBP8.99□□□□□ -0.97
NUP50-212ENST00000461194 C4orf17Q53FE4 359 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 TAS1R3Q7RTX0 852 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 RHBDD1Q8TEB9 315 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 AIDAQ96BJ3 306 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 MRS2Q9HD23 443 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 ZNF232Q9UNY5 417 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 USTQ9Y2C2 406 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 C4AP0C0L4 1744 aa8.99□□□□□ -0.97
NUP50-212ENST00000461194 SPATA31C2B4DYI2 1134 aa8.98□□□□□ -0.97
NUP50-212ENST00000461194 C21orf2O43822 256 aa8.98□□□□□ -0.97
NUP50-212ENST00000461194 SERPINB2P05120 415 aa8.98□□□□□ -0.97
NUP50-212ENST00000461194 YY1P25490 414 aa8.98□□□□□ -0.97
NUP50-212ENST00000461194 TBC1D9BQ66K14 1250 aa8.98□□□□□ -0.97
NUP50-212ENST00000461194 CLEC4GQ6UXB4 293 aa8.98□□□□□ -0.97
NUP50-212ENST00000461194 CLP1Q92989 425 aaKnown RBP8.98□□□□□ -0.97
NUP50-212ENST00000461194 ERBB4Q15303 1308 aa8.98□□□□□ -0.97
NUP50-212ENST00000461194 DLG5Q8TDM6 1919 aa8.97□□□□□ -0.97
NUP50-212ENST00000461194 PXDNLA1KZ92 1463 aa8.97□□□□□ -0.97
NUP50-212ENST00000461194 A0A0G2JLW4 131 aa8.97□□□□□ -0.97
NUP50-212ENST00000461194 DPEP1P16444 411 aa8.97□□□□□ -0.97
NUP50-212ENST00000461194 ATP2B4P23634 1241 aa8.97□□□□□ -0.97
NUP50-212ENST00000461194 WEE1P30291 646 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms