RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 PDE3BQ13370 1112 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 C14orf37Q86TY3 774 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 CITED4Q96RK1 184 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 YIPF2Q9BWQ6 316 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 CLEC4MQ9H2X3 399 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-203ENST00000460620 LIN7BQ9HAP6 207 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 ATG3Q9NT62 314 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 A0A1W2PP55 124 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 CARNS1A5YM72 827 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 WDR64B1ANS9 1081 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 NDUFB5O43674 189 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 CYP11A1P05108 521 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 RXRBP28702 533 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 SGO2Q562F6 1265 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 KIAA0319Q5VV43 1072 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 PAOXQ6QHF9 649 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 GLYCTKQ8IVS8 523 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 DDX54Q8TDD1 881 aaKnown RBP4.17□□□□□ -1.74
PTPN22-203ENST00000460620 NRSN2Q9GZP1 204 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 PIM2Q9P1W9 311 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 FAM95CA0A1B0GW59 222 aa4.16□□□□□ -1.74
PTPN22-203ENST00000460620 H3BRB1 525 aa4.16□□□□□ -1.74
PTPN22-203ENST00000460620 DLGAP3O95886 979 aa4.16□□□□□ -1.74
PTPN22-203ENST00000460620 POLR3DP05423 398 aaPredicted RBP4.16□□□□□ -1.74
PTPN22-203ENST00000460620 USP11P51784 963 aa4.16□□□□□ -1.74
PTPN22-203ENST00000460620 SOX4Q06945 474 aaPredicted RBP4.16□□□□□ -1.74
PTPN22-203ENST00000460620 PDE4CQ08493 712 aa4.16□□□□□ -1.74
PTPN22-203ENST00000460620 MFSD14AQ96MC6 490 aa4.16□□□□□ -1.74
PTPN22-203ENST00000460620 TCF12Q99081 682 aa4.16□□□□□ -1.74
PTPN22-203ENST00000460620 METTL22Q9BUU2 404 aaPredicted RBP4.16□□□□□ -1.74
PTPN22-203ENST00000460620 TUT1Q9H6E5 874 aaKnown RBP4.16□□□□□ -1.74
PTPN22-203ENST00000460620 METTL12A8MUP2 240 aa4.15□□□□□ -1.74
PTPN22-203ENST00000460620 ZNF423Q2M1K9 1284 aa4.15□□□□□ -1.74
PTPN22-203ENST00000460620 C2CD4AQ8NCU7 369 aaPredicted RBP4.15□□□□□ -1.74
PTPN22-203ENST00000460620 EZH1Q92800 747 aaPredicted RBP4.15□□□□□ -1.74
PTPN22-203ENST00000460620 NAF1Q96HR8 494 aaKnown RBP4.15□□□□□ -1.74
PTPN22-203ENST00000460620 MENTQ9BUN1 341 aa4.15□□□□□ -1.74
PTPN22-203ENST00000460620 OSBPL1AQ9BXW6 950 aa4.15□□□□□ -1.74
PTPN22-203ENST00000460620 LEMD3Q9Y2U8 911 aa4.15□□□□□ -1.74
PTPN22-203ENST00000460620 CPNE3O75131 537 aaKnown RBP4.14□□□□□ -1.75
PTPN22-203ENST00000460620 ADH5P11766 374 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 GRIA4P48058 902 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 ARHGAP4P98171 946 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 PTPN12Q05209 780 aaKnown RBP4.14□□□□□ -1.75
PTPN22-203ENST00000460620 POU4F3Q15319 338 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 NFKBIBQ15653 356 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 NFXL1Q6ZNB6 911 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 FAM129BQ96TA1 746 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 DNAJC25Q9H1X3 360 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 SRRDQ9UH36 339 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 B3GALT4O96024 378 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 F13BP05160 661 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 DRD2P14416 443 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 FOSL1P15407 271 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 ITPKAP23677 461 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 MAOBP27338 520 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 SERPINB4P48594 390 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 MSMPQ1L6U9 139 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 SPRED3Q2MJR0 410 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 CDPF1Q6NVV7 123 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 ATG4DQ86TL0 474 aaPredicted RBP4.14□□□□□ -1.75
PTPN22-203ENST00000460620 FBLIM1Q8WUP2 373 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 EHD4Q9H223 541 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 ZNF576Q9H609 170 aa4.14□□□□□ -1.75
PTPN22-203ENST00000460620 SYNGAP1Q96PV0 1343 aa4.13□□□□□ -1.75
PTPN22-203ENST00000460620 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-203ENST00000460620 HOXA10P31260 410 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-203ENST00000460620 AP3B2Q13367 1082 aa4.13□□□□□ -1.75
PTPN22-203ENST00000460620 MAP7Q14244 749 aa4.13□□□□□ -1.75
PTPN22-203ENST00000460620 RPS26P11Q5JNZ5 115 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-203ENST00000460620 PRPF40BQ6NWY9 871 aaKnown RBP4.13□□□□□ -1.75
PTPN22-203ENST00000460620 ERICH6Q7L0X2 663 aa4.13□□□□□ -1.75
PTPN22-203ENST00000460620 TXNDC2Q86VQ3 553 aa4.13□□□□□ -1.75
PTPN22-203ENST00000460620 FBXL6Q8N531 539 aa4.13□□□□□ -1.75
PTPN22-203ENST00000460620 CORO1BQ9BR76 489 aa4.13□□□□□ -1.75
PTPN22-203ENST00000460620 CYP27A1Q02318 531 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 USPL1Q5W0Q7 1092 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 ZAR1Q86SH2 424 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 TBC1D32Q96NH3 1257 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 GSX1Q9H4S2 264 aaPredicted RBP4.12□□□□□ -1.75
PTPN22-203ENST00000460620 NPHS2Q9NP85 383 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 RAD18Q9NS91 495 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 PRKAG2Q9UGJ0 569 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 TRAK1Q9UPV9 953 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 ACTL7BQ9Y614 415 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 HNRNPUQ00839 825 aaKnown RBP eCLIP4.12□□□□□ -1.75
PTPN22-203ENST00000460620 ORC1Q13415 861 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 FLCNQ8NFG4 579 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 DMRTB1Q96MA1 342 aa4.12□□□□□ -1.75
PTPN22-203ENST00000460620 TRIM56Q9BRZ2 755 aaKnown RBP4.12□□□□□ -1.75
PTPN22-203ENST00000460620 CYP26A1O43174 497 aa4.11□□□□□ -1.75
PTPN22-203ENST00000460620 CTSBP07858 339 aa4.11□□□□□ -1.75
PTPN22-203ENST00000460620 AKAP4Q5JQC9 854 aa4.11□□□□□ -1.75
PTPN22-203ENST00000460620 DUSP27Q5VZP5 1158 aa4.11□□□□□ -1.75
PTPN22-203ENST00000460620 DYMQ7RTS9 669 aa4.11□□□□□ -1.75
PTPN22-203ENST00000460620 CCDC74AQ96AQ1 378 aa4.11□□□□□ -1.75
PTPN22-203ENST00000460620 ALKBH8Q96BT7 664 aaKnown RBP4.11□□□□□ -1.75
PTPN22-203ENST00000460620 TMEM238LA0A1B0GVL6 79 aa4.1□□□□□ -1.75
PTPN22-203ENST00000460620 EIF1AYO14602 144 aaKnown RBP4.1□□□□□ -1.75
PTPN22-203ENST00000460620 AOC2O75106 756 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms