RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, human

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3C-205	ENST00000458729	TNNI2	P48788	182 aa		31.36	■■■□□ 2.61
SEMA3C-205	ENST00000458729	FMR1	Q06787	632 aa	Known RBP eCLIP	31.36	■■■□□ 2.61
SEMA3C-205	ENST00000458729	CDC42EP5	Q6NZY7	148 aa		31.36	■■■□□ 2.61
SEMA3C-205	ENST00000458729	CDCA5	Q96FF9	252 aa		31.36	■■■□□ 2.61
SEMA3C-205	ENST00000458729	NOL10	Q9BSC4	688 aa	Known RBP	31.36	■■■□□ 2.61
SEMA3C-205	ENST00000458729	USP40	Q9NVE5	1235 aa		31.36	■■■□□ 2.61
SEMA3C-205	ENST00000458729	TMEM88B	A6NKF7	163 aa		31.35	■■■□□ 2.61
SEMA3C-205	ENST00000458729	MAP4K4	O95819	1239 aa	Predicted RBP	31.35	■■■□□ 2.61
SEMA3C-205	ENST00000458729	PI4K2B	Q8TCG2	481 aa		31.35	■■■□□ 2.61
SEMA3C-205	ENST00000458729	EDC3	Q96F86	508 aa	Known RBP	31.35	■■■□□ 2.61
SEMA3C-205	ENST00000458729	CELF2	O95319	508 aa	Known RBP	31.34	■■■□□ 2.61
SEMA3C-205	ENST00000458729	PDE1A	P54750	535 aa		31.34	■■■□□ 2.61
SEMA3C-205	ENST00000458729	DLK2	Q6UY11	383 aa		31.34	■■■□□ 2.61
SEMA3C-205	ENST00000458729	MAST2	Q6P0Q8	1798 aa		31.34	■■■□□ 2.61
SEMA3C-205	ENST00000458729	TCP10L2	B9ZVM9	353 aa		31.33	■■■□□ 2.61
SEMA3C-205	ENST00000458729	BAG3	O95817	575 aa		31.33	■■■□□ 2.61
SEMA3C-205	ENST00000458729	CYP7A1	P22680	504 aa		31.33	■■■□□ 2.61
SEMA3C-205	ENST00000458729	MAGEB6	Q8N7X4	407 aa		31.33	■■■□□ 2.61
SEMA3C-205	ENST00000458729	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	31.33	■■■□□ 2.61
SEMA3C-205	ENST00000458729	ZNF408	Q9H9D4	720 aa		31.33	■■■□□ 2.61
SEMA3C-205	ENST00000458729	CREBZF	Q9NS37	354 aa		31.33	■■■□□ 2.61
SEMA3C-205	ENST00000458729	MYO5A	Q9Y4I1	1855 aa	Known RBP	31.33	■■■□□ 2.61
SEMA3C-205	ENST00000458729	DOCK2	Q92608	1830 aa		31.33	■■■□□ 2.61
SEMA3C-205	ENST00000458729	RASA3	Q14644	834 aa		31.32	■■■□□ 2.6
SEMA3C-205	ENST00000458729	ERICH6B	Q5W0A0	696 aa		31.32	■■■□□ 2.6
SEMA3C-205	ENST00000458729	CST9	Q5W186	159 aa		31.32	■■■□□ 2.6
SEMA3C-205	ENST00000458729	FAM83A	Q86UY5	434 aa		31.32	■■■□□ 2.6
SEMA3C-205	ENST00000458729	TRPM7	Q96QT4	1865 aa		31.32	■■■□□ 2.6
SEMA3C-205	ENST00000458729	CACNB3	P54284	484 aa		31.31	■■■□□ 2.6
SEMA3C-205	ENST00000458729	SLC9C2	Q5TAH2	1124 aa		31.31	■■■□□ 2.6
SEMA3C-205	ENST00000458729	PLCG2	P16885	1265 aa		31.3	■■■□□ 2.6
SEMA3C-205	ENST00000458729	NF2	P35240	595 aa		31.3	■■■□□ 2.6
SEMA3C-205	ENST00000458729	PPP4C	P60510	307 aa		31.3	■■■□□ 2.6
SEMA3C-205	ENST00000458729	PDE6A	P16499	860 aa		31.29	■■■□□ 2.6
SEMA3C-205	ENST00000458729	PRAMEF18	Q5VWM3	479 aa		31.29	■■■□□ 2.6
SEMA3C-205	ENST00000458729	ZSCAN25	Q6NSZ9	544 aa		31.29	■■■□□ 2.6
SEMA3C-205	ENST00000458729	CERS3	Q8IU89	383 aa		31.29	■■■□□ 2.6
SEMA3C-205	ENST00000458729	IDI2	Q9BXS1	227 aa		31.29	■■■□□ 2.6
SEMA3C-205	ENST00000458729	RHBDL3	P58872	404 aa		31.28	■■■□□ 2.6
SEMA3C-205	ENST00000458729	SUPT20HL1	Q3ZLR7	823 aa		31.28	■■■□□ 2.6
SEMA3C-205	ENST00000458729	CENPQ	Q7L2Z9	268 aa	Predicted RBP	31.28	■■■□□ 2.6
SEMA3C-205	ENST00000458729	ADGRA1	Q86SQ6	560 aa		31.28	■■■□□ 2.6
SEMA3C-205	ENST00000458729	PLEKHM2	Q8IWE5	1019 aa		31.28	■■■□□ 2.6
SEMA3C-205	ENST00000458729	OSBPL3	Q9H4L5	887 aa		31.28	■■■□□ 2.6
SEMA3C-205	ENST00000458729	C2orf69	Q8N8R5	385 aa		31.27	■■■□□ 2.6
SEMA3C-205	ENST00000458729	KBTBD3	Q8NAB2	608 aa		31.27	■■■□□ 2.6
SEMA3C-205	ENST00000458729	CCDC136	Q96JN2	1154 aa		31.27	■■■□□ 2.6
SEMA3C-205	ENST00000458729	AATF	Q9NY61	560 aa	Known RBP eCLIP	31.27	■■■□□ 2.6
SEMA3C-205	ENST00000458729	FAM151A	Q8WW52	585 aa		31.26	■■■□□ 2.6
SEMA3C-205	ENST00000458729	GBA2	Q9HCG7	927 aa	Predicted RBP	31.26	■■■□□ 2.6
SEMA3C-205	ENST00000458729	ZNF532	Q9HCE3	1301 aa		31.26	■■■□□ 2.59
SEMA3C-205	ENST00000458729	CNTNAP1	P78357	1384 aa		31.26	■■■□□ 2.59
SEMA3C-205	ENST00000458729	ADD2	P35612	726 aa		31.25	■■■□□ 2.59
SEMA3C-205	ENST00000458729	FKBP1B	P68106	108 aa		31.25	■■■□□ 2.59
SEMA3C-205	ENST00000458729	NFIA	Q12857	509 aa		31.25	■■■□□ 2.59
SEMA3C-205	ENST00000458729	LRRFIP1	Q32MZ4	808 aa	Known RBP	31.25	■■■□□ 2.59
SEMA3C-205	ENST00000458729	TMEM39B	Q9GZU3	492 aa		31.25	■■■□□ 2.59
SEMA3C-205	ENST00000458729	ENTPD3	O75355	529 aa		31.24	■■■□□ 2.59
SEMA3C-205	ENST00000458729	NPM3	O75607	178 aa	Known RBP	31.24	■■■□□ 2.59
SEMA3C-205	ENST00000458729	WDHD1	O75717	1129 aa	Predicted RBP	31.24	■■■□□ 2.59
SEMA3C-205	ENST00000458729	UBE3C	Q15386	1083 aa		31.24	■■■□□ 2.59
SEMA3C-205	ENST00000458729	TEPSIN	Q96N21	525 aa		31.24	■■■□□ 2.59
SEMA3C-205	ENST00000458729	FAM198A	Q9UFP1	575 aa		31.24	■■■□□ 2.59
SEMA3C-205	ENST00000458729	TCRBV5S4A2T	A0A5A2	114 aa		31.24	■■■□□ 2.59
SEMA3C-205	ENST00000458729	TEX11	Q8IYF3	940 aa		31.24	■■■□□ 2.59
SEMA3C-205	ENST00000458729	ABT1	Q9ULW3	272 aa	Known RBP	31.24	■■■□□ 2.59
SEMA3C-205	ENST00000458729	RFX7	Q2KHR2	1363 aa		31.23	■■■□□ 2.59
SEMA3C-205	ENST00000458729	RPAP1	Q9BWH6	1393 aa	Predicted RBP	31.23	■■■□□ 2.59
SEMA3C-205	ENST00000458729	RGS3	P49796	1198 aa		31.23	■■■□□ 2.59
SEMA3C-205	ENST00000458729	TCP10	Q12799	353 aa		31.23	■■■□□ 2.59
SEMA3C-205	ENST00000458729	NBPF12	Q5TAG4	269 aa	Predicted RBP	31.23	■■■□□ 2.59
SEMA3C-205	ENST00000458729	MIGA1	Q8NAN2	632 aa		31.23	■■■□□ 2.59
SEMA3C-205	ENST00000458729	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	31.23	■■■□□ 2.59
SEMA3C-205	ENST00000458729	HOOK2	Q96ED9	719 aa		31.23	■■■□□ 2.59
SEMA3C-205	ENST00000458729	TLL2	Q9Y6L7	1015 aa		31.23	■■■□□ 2.59
SEMA3C-205	ENST00000458729	ZFY	P08048	801 aa	Predicted RBP	31.22	■■■□□ 2.59
SEMA3C-205	ENST00000458729	EVI5L	Q96CN4	794 aa		31.22	■■■□□ 2.59
SEMA3C-205	ENST00000458729	MAGEB6P1	A0A0J9YX57	407 aa		31.21	■■■□□ 2.59
SEMA3C-205	ENST00000458729	PDE4A	P27815	886 aa		31.21	■■■□□ 2.59
SEMA3C-205	ENST00000458729	DYNLL1	P63167	89 aa	Known RBP	31.21	■■■□□ 2.59
SEMA3C-205	ENST00000458729	HTRA3	P83110	453 aa		31.21	■■■□□ 2.59
SEMA3C-205	ENST00000458729	SAPCD2	Q86UD0	394 aa		31.21	■■■□□ 2.59
SEMA3C-205	ENST00000458729	PPP1R12B	O60237	982 aa	Predicted RBP	31.2	■■■□□ 2.58
SEMA3C-205	ENST00000458729	PICALM	Q13492	652 aa		31.2	■■■□□ 2.58
SEMA3C-205	ENST00000458729	FSD1	Q9BTV5	496 aa		31.2	■■■□□ 2.58
SEMA3C-205	ENST00000458729	DDX4	Q9NQI0	724 aa	Known RBP	31.2	■■■□□ 2.58
SEMA3C-205	ENST00000458729	RNF113A	O15541	343 aa	Known RBP	31.19	■■■□□ 2.58
SEMA3C-205	ENST00000458729	TTLL12	Q14166	644 aa	Predicted RBP	31.19	■■■□□ 2.58
SEMA3C-205	ENST00000458729	ARMC9	Q7Z3E5	817 aa		31.19	■■■□□ 2.58
SEMA3C-205	ENST00000458729	RIOK1	Q9BRS2	568 aa	Known RBP	31.19	■■■□□ 2.58
SEMA3C-205	ENST00000458729	TICAM2	Q86XR7	235 aa		31.18	■■■□□ 2.58
SEMA3C-205	ENST00000458729	HHIPL1	Q96JK4	782 aa		31.18	■■■□□ 2.58
SEMA3C-205	ENST00000458729	PPP4R2	Q9NY27	417 aa		31.18	■■■□□ 2.58
SEMA3C-205	ENST00000458729	PAPPA2	Q9BXP8	1791 aa		31.17	■■■□□ 2.58
SEMA3C-205	ENST00000458729	MYH7	P12883	1935 aa		31.17	■■■□□ 2.58
SEMA3C-205	ENST00000458729	RASSF10	A6NK89	507 aa		31.17	■■■□□ 2.58
SEMA3C-205	ENST00000458729	HUNK	P57058	714 aa		31.17	■■■□□ 2.58
SEMA3C-205	ENST00000458729	DEFB115	Q30KQ5	88 aa		31.17	■■■□□ 2.58
SEMA3C-205	ENST00000458729	CDAN1	Q8IWY9	1227 aa		31.17	■■■□□ 2.58
SEMA3C-205	ENST00000458729	ZFPM1	Q8IX07	1006 aa		31.17	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms