RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 TPRNQ4KMQ1 711 aa19.25■□□□□ 0.67
CAPN13-203ENST00000458085 LEMD3Q9Y2U8 911 aa19.25■□□□□ 0.67
CAPN13-203ENST00000458085 TIAM2Q8IVF5 1701 aa19.25■□□□□ 0.67
CAPN13-203ENST00000458085 GOLGA8BA8MQT2 603 aa19.25■□□□□ 0.67
CAPN13-203ENST00000458085 SH2B2O14492 632 aaPredicted RBP19.25■□□□□ 0.67
CAPN13-203ENST00000458085 NACAP1Q9BZK3 213 aa19.25■□□□□ 0.67
CAPN13-203ENST00000458085 BAZ2AQ9UIF9 1905 aaKnown RBP19.24■□□□□ 0.67
CAPN13-203ENST00000458085 AKNAD1Q5T1N1 836 aa19.24■□□□□ 0.67
CAPN13-203ENST00000458085 FAM184AQ8NB25 1140 aa19.24■□□□□ 0.67
CAPN13-203ENST00000458085 RBM17Q96I25 401 aaKnown RBP19.24■□□□□ 0.67
CAPN13-203ENST00000458085 KDM4AO75164 1064 aa19.23■□□□□ 0.67
CAPN13-203ENST00000458085 MBD3O95983 291 aa19.23■□□□□ 0.67
CAPN13-203ENST00000458085 FDPSP14324 419 aaKnown RBP19.23■□□□□ 0.67
CAPN13-203ENST00000458085 L1TD1Q5T7N2 865 aaKnown RBP19.23■□□□□ 0.67
CAPN13-203ENST00000458085 IGDCC4Q8TDY8 1250 aa19.23■□□□□ 0.67
CAPN13-203ENST00000458085 ZSWIM5Q9P217 1185 aa19.23■□□□□ 0.67
CAPN13-203ENST00000458085 ANGEL1Q9UNK9 670 aaKnown RBP19.23■□□□□ 0.67
CAPN13-203ENST00000458085 ANKRD31Q8N7Z5 1873 aa19.23■□□□□ 0.67
CAPN13-203ENST00000458085 RGS17Q9UGC6 210 aaPredicted RBP19.23■□□□□ 0.67
CAPN13-203ENST00000458085 PDIA4P13667 645 aaKnown RBP19.22■□□□□ 0.67
CAPN13-203ENST00000458085 HOXA10P31260 410 aaPredicted RBP19.22■□□□□ 0.67
CAPN13-203ENST00000458085 STAG1Q8WVM7 1258 aa19.22■□□□□ 0.67
CAPN13-203ENST00000458085 PANK2Q9BZ23 570 aa19.22■□□□□ 0.67
CAPN13-203ENST00000458085 CYP2D7A0A087X1C5 515 aa19.22■□□□□ 0.67
CAPN13-203ENST00000458085 KLRG2A4D1S0 409 aaPredicted RBP19.22■□□□□ 0.67
CAPN13-203ENST00000458085 RXRAP19793 462 aa19.22■□□□□ 0.67
CAPN13-203ENST00000458085 HMGN5P82970 282 aaKnown RBP19.22■□□□□ 0.67
CAPN13-203ENST00000458085 PPARAQ07869 468 aa19.22■□□□□ 0.67
CAPN13-203ENST00000458085 RESTQ13127 1097 aa19.22■□□□□ 0.67
CAPN13-203ENST00000458085 GRIK5Q16478 980 aa19.22■□□□□ 0.67
CAPN13-203ENST00000458085 RRP12Q5JTH9 1297 aaKnown RBP19.22■□□□□ 0.67
CAPN13-203ENST00000458085 MFSD6Q6ZSS7 791 aa19.22■□□□□ 0.67
CAPN13-203ENST00000458085 MINDY4BA8MYZ0 360 aa19.21■□□□□ 0.67
CAPN13-203ENST00000458085 H3BQV1 296 aa19.21■□□□□ 0.67
CAPN13-203ENST00000458085 UFL1O94874 794 aa19.21■□□□□ 0.67
CAPN13-203ENST00000458085 ZNF445P59923 1031 aa19.21■□□□□ 0.67
CAPN13-203ENST00000458085 IFFO2Q5TF58 517 aa19.21■□□□□ 0.67
CAPN13-203ENST00000458085 TDRD7Q8NHU6 1098 aaKnown RBP19.21■□□□□ 0.67
CAPN13-203ENST00000458085 GRPEL1Q9HAV7 217 aa19.21■□□□□ 0.67
CAPN13-203ENST00000458085 LY9Q9HBG7 655 aa19.21■□□□□ 0.67
CAPN13-203ENST00000458085 AATFQ9NY61 560 aaKnown RBP eCLIP19.21■□□□□ 0.67
CAPN13-203ENST00000458085 EVX2Q03828 476 aa19.21■□□□□ 0.67
CAPN13-203ENST00000458085 CCDC88AQ3V6T2 1871 aa19.2■□□□□ 0.66
CAPN13-203ENST00000458085 GUCY1B3Q02153 619 aa19.2■□□□□ 0.66
CAPN13-203ENST00000458085 TTC6Q86TZ1 520 aa19.2■□□□□ 0.66
CAPN13-203ENST00000458085 ZKSCAN3Q9BRR0 538 aa19.2■□□□□ 0.66
CAPN13-203ENST00000458085 TOMM22Q9NS69 142 aa19.2■□□□□ 0.66
CAPN13-203ENST00000458085 TFIP11Q9UBB9 837 aaKnown RBP19.2■□□□□ 0.66
CAPN13-203ENST00000458085 TNS1Q9HBL0 1735 aaKnown RBP19.2■□□□□ 0.66
CAPN13-203ENST00000458085 TMEM67Q5HYA8 995 aa19.2■□□□□ 0.66
CAPN13-203ENST00000458085 APOA5Q6Q788 366 aa19.2■□□□□ 0.66
CAPN13-203ENST00000458085 NLGN1Q8N2Q7 840 aa19.2■□□□□ 0.66
CAPN13-203ENST00000458085 TMEM87BQ96K49 555 aa19.2■□□□□ 0.66
CAPN13-203ENST00000458085 POLLQ9UGP5 575 aa19.2■□□□□ 0.66
CAPN13-203ENST00000458085 BBOX1O75936 387 aa19.19■□□□□ 0.66
CAPN13-203ENST00000458085 ADD1P35611 737 aaKnown RBP19.19■□□□□ 0.66
CAPN13-203ENST00000458085 MSL1Q68DK7 614 aa19.19■□□□□ 0.66
CAPN13-203ENST00000458085 POTEAQ6S8J7 498 aa19.19■□□□□ 0.66
CAPN13-203ENST00000458085 C15orf52Q6ZUT6 534 aaKnown RBP19.19■□□□□ 0.66
CAPN13-203ENST00000458085 CRAMP1Q96RY5 1269 aa19.19■□□□□ 0.66
CAPN13-203ENST00000458085 MYL10Q9BUA6 226 aa19.19■□□□□ 0.66
CAPN13-203ENST00000458085 CNNM2Q9H8M5 875 aa19.19■□□□□ 0.66
CAPN13-203ENST00000458085 MAST2Q6P0Q8 1798 aa19.19■□□□□ 0.66
CAPN13-203ENST00000458085 SYCE3A1L190 88 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 IFIT3O14879 490 aaKnown RBP19.18■□□□□ 0.66
CAPN13-203ENST00000458085 ZBTB22O15209 634 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 UBE2HP62256 183 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 KRT85P78386 507 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 CCDC144CPQ8IYA2 1237 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 KRT23Q9C075 422 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 GGA1Q9UJY5 639 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 NRXN2Q9P2S2 1712 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 CDC27P30260 824 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 MRE11P49959 708 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 OTUD7BQ6GQQ9 843 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 ZNF804AQ7Z570 1209 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 MICU3Q86XE3 530 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 BRIP1Q9BX63 1249 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 ANAPC4Q9UJX5 808 aa19.18■□□□□ 0.66
CAPN13-203ENST00000458085 MMP10P09238 476 aa19.17■□□□□ 0.66
CAPN13-203ENST00000458085 ATP2B4P23634 1241 aa19.17■□□□□ 0.66
CAPN13-203ENST00000458085 CTR9Q6PD62 1173 aa19.17■□□□□ 0.66
CAPN13-203ENST00000458085 OLFM4Q6UX06 510 aa19.17■□□□□ 0.66
CAPN13-203ENST00000458085 SGMS1Q86VZ5 419 aa19.17■□□□□ 0.66
CAPN13-203ENST00000458085 DZIP1Q86YF9 867 aaKnown RBP19.17■□□□□ 0.66
CAPN13-203ENST00000458085 CD209Q9NNX6 404 aa19.17■□□□□ 0.66
CAPN13-203ENST00000458085 ISY1Q9ULR0 285 aaKnown RBP19.17■□□□□ 0.66
CAPN13-203ENST00000458085 METAP2P50579 478 aaKnown RBP eCLIP19.17■□□□□ 0.66
CAPN13-203ENST00000458085 NFXL1Q6ZNB6 911 aa19.17■□□□□ 0.66
CAPN13-203ENST00000458085 TBC1D16Q8TBP0 767 aa19.17■□□□□ 0.66
CAPN13-203ENST00000458085 GJB4Q9NTQ9 266 aa19.17■□□□□ 0.66
CAPN13-203ENST00000458085 MYH2Q9UKX2 1941 aa19.17■□□□□ 0.66
CAPN13-203ENST00000458085 DIXDC1Q155Q3 683 aa19.16■□□□□ 0.66
CAPN13-203ENST00000458085 WDR66Q8TBY9 1149 aa19.16■□□□□ 0.66
CAPN13-203ENST00000458085 FAM217BQ9NTX9 383 aaPredicted RBP19.16■□□□□ 0.66
CAPN13-203ENST00000458085 PODXL2Q9NZ53 605 aa19.16■□□□□ 0.66
CAPN13-203ENST00000458085 ORC3Q9UBD5 711 aaPredicted RBP19.16■□□□□ 0.66
CAPN13-203ENST00000458085 LTBP1Q14766 1721 aa19.16■□□□□ 0.66
CAPN13-203ENST00000458085 USP17L12C9JPN9 530 aa19.16■□□□□ 0.66
CAPN13-203ENST00000458085 USP17L21D6R901 530 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms