RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 BCL2L12Q9HB09 334 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 POLR3EQ9NVU0 708 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 IQSEC3Q9UPP2 1182 aaPredicted RBP19.45■□□□□ 0.7
CCDC43-202ENST00000457422 TACC3Q9Y6A5 838 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 NID2Q14112 1375 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 SNW1Q13573 536 aaKnown RBP19.45■□□□□ 0.7
CCDC43-202ENST00000457422 SASS6Q6UVJ0 657 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 ENGASEQ8NFI3 743 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 STAG1Q8WVM7 1258 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 MTA3Q9BTC8 594 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 KRT23Q9C075 422 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 GOLPH3LQ9H4A5 285 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 LRP2BPQ9P2M1 347 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 THSD7AQ9UPZ6 1657 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 CACNA1SQ13698 1873 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 AP5Z1O43299 807 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 YEATS4O95619 227 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 RXRAP19793 462 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 ANO6Q4KMQ2 910 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 CPLX2Q6PUV4 134 aaKnown RBP19.44■□□□□ 0.7
CCDC43-202ENST00000457422 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.44■□□□□ 0.7
CCDC43-202ENST00000457422 CCDC73Q6ZRK6 1079 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 GNL3LQ9NVN8 582 aaKnown RBP19.44■□□□□ 0.7
CCDC43-202ENST00000457422 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCDC43-202ENST00000457422 SLC4A4Q9Y6R1 1079 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 COL1A1P02452 1464 aaPredicted RBP19.44■□□□□ 0.7
CCDC43-202ENST00000457422 A0A1W2PQ27 194 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 A0A1W2PQ64 194 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 A0A1W2PQD8 194 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 ZBTB43O43298 467 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 GYG1P46976 350 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 FAM160A1Q05DH4 1040 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 MYSM1Q5VVJ2 828 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 MIGA1Q8NAN2 632 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 LINC00301Q8NCQ3 95 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 NAP1L5Q96NT1 182 aaPredicted RBP19.44■□□□□ 0.7
CCDC43-202ENST00000457422 GJB4Q9NTQ9 266 aa19.44■□□□□ 0.7
CCDC43-202ENST00000457422 WTIPA6NIX2 430 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-202ENST00000457422 TDO2P48775 406 aa19.43■□□□□ 0.7
CCDC43-202ENST00000457422 KIF23Q02241 960 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-202ENST00000457422 TMEM67Q5HYA8 995 aa19.43■□□□□ 0.7
CCDC43-202ENST00000457422 ADALQ6DHV7 355 aa19.43■□□□□ 0.7
CCDC43-202ENST00000457422 FNBP4Q8N3X1 1017 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-202ENST00000457422 KCNG4Q8TDN1 519 aa19.43■□□□□ 0.7
CCDC43-202ENST00000457422 CBX8Q9HC52 389 aa19.43■□□□□ 0.7
CCDC43-202ENST00000457422 ZSWIM5Q9P217 1185 aa19.43■□□□□ 0.7
CCDC43-202ENST00000457422 NARFQ9UHQ1 456 aa19.43■□□□□ 0.7
CCDC43-202ENST00000457422 CDC27P30260 824 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 ME1P48163 572 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 NTRK3Q16288 839 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 NFXL1Q6ZNB6 911 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 MFSD6Q6ZSS7 791 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 MICU3Q86XE3 530 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 NYXQ9GZU5 481 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 SRP68Q9UHB9 627 aaKnown RBP19.42■□□□□ 0.7
CCDC43-202ENST00000457422 PCDHA7Q9UN72 937 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 MINPP1Q9UNW1 487 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 STK36Q9NRP7 1315 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 UBAP1LF5GYI3 381 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 RPS6KA4O75676 772 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 CYP7A1P22680 504 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 GTF2E1P29083 439 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-202ENST00000457422 PLCB2Q00722 1185 aa19.42■□□□□ 0.7
CCDC43-202ENST00000457422 TDRD7Q8NHU6 1098 aaKnown RBP19.42■□□□□ 0.7
CCDC43-202ENST00000457422 CELF1Q92879 486 aaKnown RBP19.42■□□□□ 0.7
CCDC43-202ENST00000457422 KIF28PB7ZC32 967 aa19.41■□□□□ 0.7
CCDC43-202ENST00000457422 ADGRA1Q86SQ6 560 aa19.41■□□□□ 0.7
CCDC43-202ENST00000457422 CCDC144CPQ8IYA2 1237 aa19.41■□□□□ 0.7
CCDC43-202ENST00000457422 MRPS27Q92552 414 aaKnown RBP19.41■□□□□ 0.7
CCDC43-202ENST00000457422 AIFM3Q96NN9 605 aa19.41■□□□□ 0.7
CCDC43-202ENST00000457422 ALG1Q9BT22 464 aa19.41■□□□□ 0.7
CCDC43-202ENST00000457422 FAM217BQ9NTX9 383 aaPredicted RBP19.41■□□□□ 0.7
CCDC43-202ENST00000457422 MYH13Q9UKX3 1938 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 GOLGA8AA7E2F4 631 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 IFIT3O14879 490 aaKnown RBP19.4■□□□□ 0.7
CCDC43-202ENST00000457422 KINO60870 393 aaKnown RBP19.4■□□□□ 0.7
CCDC43-202ENST00000457422 POLR3DP05423 398 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-202ENST00000457422 LUZP1Q86V48 1076 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 MPNDQ8N594 471 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 FSIP1Q8NA03 581 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 MYL10Q9BUA6 226 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 RNF41Q9H4P4 317 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-202ENST00000457422 CLIC4Q9Y696 253 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 TAF1LQ8IZX4 1826 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 STK38Q15208 465 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 CAVIN4Q5BKX8 364 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 RAI14Q9P0K7 980 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 ABCF2Q9UG63 623 aa19.4■□□□□ 0.7
CCDC43-202ENST00000457422 LY75O60449 1722 aa19.39■□□□□ 0.7
CCDC43-202ENST00000457422 GNPATO15228 680 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 ZNF165P49910 485 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 FMR1NBQ8N0W7 255 aaPredicted RBP19.39■□□□□ 0.69
CCDC43-202ENST00000457422 PHKBQ93100 1093 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 ANAPC4Q9UJX5 808 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 SLC12A7Q9Y666 1083 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 PDS5AQ29RF7 1337 aaKnown RBP19.39■□□□□ 0.69
CCDC43-202ENST00000457422 CCDC69A6NI79 296 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 SEMA3EO15041 775 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 SPTLC2O15270 562 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 IARSP41252 1262 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms