RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 SLC10A5Q5PT55 438 aa11.39□□□□□ -0.59
THBS3-203ENST00000457183 FBXO38Q6PIJ6 1188 aa11.39□□□□□ -0.59
THBS3-203ENST00000457183 CCAR1Q8IX12 1150 aaKnown RBP11.39□□□□□ -0.59
THBS3-203ENST00000457183 DHX40Q8IX18 779 aaKnown RBP11.39□□□□□ -0.59
THBS3-203ENST00000457183 CCAR2Q8N163 923 aaKnown RBP11.39□□□□□ -0.59
THBS3-203ENST00000457183 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
THBS3-203ENST00000457183 NEK1Q96PY6 1258 aa11.39□□□□□ -0.59
THBS3-203ENST00000457183 SYT17Q9BSW7 474 aa11.39□□□□□ -0.59
THBS3-203ENST00000457183 FTOQ9C0B1 505 aaKnown RBP eCLIP11.39□□□□□ -0.59
THBS3-203ENST00000457183 SRP68Q9UHB9 627 aaKnown RBP11.39□□□□□ -0.59
THBS3-203ENST00000457183 CTAGE5O15320 804 aa11.38□□□□□ -0.59
THBS3-203ENST00000457183 SNW1Q13573 536 aaKnown RBP11.38□□□□□ -0.59
THBS3-203ENST00000457183 Q6ZUG5 572 aa11.38□□□□□ -0.59
THBS3-203ENST00000457183 EDC3Q96F86 508 aaKnown RBP11.38□□□□□ -0.59
THBS3-203ENST00000457183 GOLPH3LQ9H4A5 285 aa11.38□□□□□ -0.59
THBS3-203ENST00000457183 ST7Q9NRC1 585 aa11.38□□□□□ -0.59
THBS3-203ENST00000457183 CARMIL3Q8ND23 1372 aa11.38□□□□□ -0.59
THBS3-203ENST00000457183 VGLL3A8MV65 326 aa11.38□□□□□ -0.59
THBS3-203ENST00000457183 IFIT5Q13325 482 aaKnown RBP11.38□□□□□ -0.59
THBS3-203ENST00000457183 KRT32Q14532 448 aa11.38□□□□□ -0.59
THBS3-203ENST00000457183 ERO1AQ96HE7 468 aa11.38□□□□□ -0.59
THBS3-203ENST00000457183 SCRN1Q12765 414 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 RIC1Q4ADV7 1423 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 TPTE2Q6XPS3 522 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 KLHDC4Q8TBB5 520 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 FAM53CQ9NYF3 392 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 RCOR1Q9UKL0 485 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 IL15P40933 162 aaPredicted RBP11.37□□□□□ -0.59
THBS3-203ENST00000457183 SYNE4Q8N205 404 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 LRRC2Q9BYS8 371 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 ANKRD18BA2A2Z9 1011 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 KINO60870 393 aaKnown RBP11.37□□□□□ -0.59
THBS3-203ENST00000457183 GYS1P13807 737 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 ERCC4Q92889 916 aaPredicted RBP11.37□□□□□ -0.59
THBS3-203ENST00000457183 ANO10Q9NW15 660 aa11.37□□□□□ -0.59
THBS3-203ENST00000457183 EYA2O00167 538 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 NPHP1O15259 732 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 SLU7O95391 586 aaKnown RBP11.36□□□□□ -0.59
THBS3-203ENST00000457183 FOSBP53539 338 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 CCDC152Q4G0S7 254 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 CCDC73Q6ZRK6 1079 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 NBPF5PQ86XG9 351 aaPredicted RBP11.36□□□□□ -0.59
THBS3-203ENST00000457183 ENGASEQ8NFI3 743 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 SMARCC2Q8TAQ2 1214 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 GPR108Q9NPR9 543 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 KCND1Q9NSA2 647 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 ERICH4A6NGS2 130 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 CHGBP05060 677 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 CYP21A2P08686 494 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 FAM160A1Q05DH4 1040 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 SF3B3Q15393 1217 aaKnown RBP11.36□□□□□ -0.59
THBS3-203ENST00000457183 SLFNL1Q499Z3 407 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 AOPEPQ8N6M6 819 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 USP28Q96RU2 1077 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 ZNF446Q9NWS9 450 aa11.36□□□□□ -0.59
THBS3-203ENST00000457183 MMP10P09238 476 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 ITGA6P23229 1130 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 TM4SF1P30408 202 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 NAA16Q6N069 864 aaPredicted RBP11.35□□□□□ -0.59
THBS3-203ENST00000457183 CCDC129Q6ZRS4 1044 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 NBPF11Q86T75 865 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 CEP57L1Q8IYX8 460 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 NLGN1Q8N2Q7 840 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 FBXW7Q969H0 707 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 GSDMDP57764 484 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 NFIXQ14938 502 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 ERFEQ4G0M1 354 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 BICDL1Q6ZP65 573 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 ATG9AQ7Z3C6 839 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 LRRN4CLQ8ND94 238 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 NSUN7Q8NE18 718 aaKnown RBP11.35□□□□□ -0.59
THBS3-203ENST00000457183 SEC62Q99442 399 aaKnown RBP11.35□□□□□ -0.59
THBS3-203ENST00000457183 LLPHQ9BRT6 129 aaKnown RBP11.35□□□□□ -0.59
THBS3-203ENST00000457183 GREM2Q9H772 168 aa11.35□□□□□ -0.59
THBS3-203ENST00000457183 KIF2AO00139 706 aaPredicted RBP11.34□□□□□ -0.59
THBS3-203ENST00000457183 PFKFB2O60825 505 aa11.34□□□□□ -0.59
THBS3-203ENST00000457183 ME1P48163 572 aa11.34□□□□□ -0.59
THBS3-203ENST00000457183 E4F1Q66K89 784 aaPredicted RBP11.34□□□□□ -0.59
THBS3-203ENST00000457183 NAT10Q9H0A0 1025 aaKnown RBP11.34□□□□□ -0.59
THBS3-203ENST00000457183 OSBPL5Q9H0X9 879 aaPredicted RBP11.34□□□□□ -0.59
THBS3-203ENST00000457183 CTDNEP1O95476 244 aa11.34□□□□□ -0.59
THBS3-203ENST00000457183 IRX5P78411 483 aaPredicted RBP11.34□□□□□ -0.59
THBS3-203ENST00000457183 FSIP1Q8NA03 581 aa11.34□□□□□ -0.59
THBS3-203ENST00000457183 NLGN2Q8NFZ4 835 aa11.34□□□□□ -0.59
THBS3-203ENST00000457183 NRXN2Q9P2S2 1712 aa11.34□□□□□ -0.59
THBS3-203ENST00000457183 PPFIA3O75145 1194 aa11.33□□□□□ -0.6
THBS3-203ENST00000457183 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
THBS3-203ENST00000457183 ERCC6LQ2NKX8 1250 aa11.33□□□□□ -0.6
THBS3-203ENST00000457183 L2HGDHQ9H9P8 463 aa11.33□□□□□ -0.6
THBS3-203ENST00000457183 DBNLQ9UJU6 430 aaKnown RBP11.33□□□□□ -0.6
THBS3-203ENST00000457183 U3KPZ7 1027 aaPredicted RBP11.33□□□□□ -0.6
THBS3-203ENST00000457183 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
THBS3-203ENST00000457183 ATP5JP18859 108 aa11.33□□□□□ -0.6
THBS3-203ENST00000457183 TFCP2Q12800 502 aa11.33□□□□□ -0.6
THBS3-203ENST00000457183 STOX1Q6ZVD7 989 aa11.33□□□□□ -0.6
THBS3-203ENST00000457183 PPP1R13BQ96KQ4 1090 aa11.33□□□□□ -0.6
THBS3-203ENST00000457183 NLRP3Q96P20 1036 aa11.33□□□□□ -0.6
THBS3-203ENST00000457183 IMPACTQ9P2X3 320 aa11.33□□□□□ -0.6
THBS3-203ENST00000457183 AKAP2Q9Y2D5 859 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms