RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 TDRD3Q9H7E2 651 aaKnown RBP21.6■■□□□ 1.05
FAM239A-203ENST00000456563 ADAMTSL1Q8N6G6 1762 aa21.6■■□□□ 1.05
FAM239A-203ENST00000456563 MYH2Q9UKX2 1941 aa21.6■■□□□ 1.05
FAM239A-203ENST00000456563 ASTN2O75129 1339 aaPredicted RBP21.59■■□□□ 1.05
FAM239A-203ENST00000456563 PITPNM2Q9BZ72 1349 aa21.59■■□□□ 1.05
FAM239A-203ENST00000456563 BAG3O95817 575 aa21.59■■□□□ 1.05
FAM239A-203ENST00000456563 SDSP20132 328 aa21.59■■□□□ 1.05
FAM239A-203ENST00000456563 SPDYE2Q495Y8 402 aa21.59■■□□□ 1.05
FAM239A-203ENST00000456563 CLEC11AQ9Y240 323 aa21.59■■□□□ 1.05
FAM239A-203ENST00000456563 RFX7Q2KHR2 1363 aa21.59■■□□□ 1.05
FAM239A-203ENST00000456563 ANGEL2Q5VTE6 544 aaKnown RBP21.58■■□□□ 1.05
FAM239A-203ENST00000456563 CDC42EP5Q6NZY7 148 aa21.58■■□□□ 1.05
FAM239A-203ENST00000456563 CERS3Q8IU89 383 aa21.58■■□□□ 1.05
FAM239A-203ENST00000456563 NOL10Q9BSC4 688 aaKnown RBP21.58■■□□□ 1.05
FAM239A-203ENST00000456563 GGA3Q9NZ52 723 aa21.58■■□□□ 1.05
FAM239A-203ENST00000456563 ZNF70Q9UC06 446 aaPredicted RBP21.58■■□□□ 1.05
FAM239A-203ENST00000456563 CHGBP05060 677 aa21.57■■□□□ 1.04
FAM239A-203ENST00000456563 RHBDL3P58872 404 aa21.57■■□□□ 1.04
FAM239A-203ENST00000456563 SLFNL1Q499Z3 407 aa21.57■■□□□ 1.04
FAM239A-203ENST00000456563 BMP2KLQ5H9B9 411 aa21.57■■□□□ 1.04
FAM239A-203ENST00000456563 APPBP2Q92624 585 aa21.57■■□□□ 1.04
FAM239A-203ENST00000456563 DCPSQ96C86 337 aaKnown RBP21.57■■□□□ 1.04
FAM239A-203ENST00000456563 USP40Q9NVE5 1235 aa21.57■■□□□ 1.04
FAM239A-203ENST00000456563 AATFQ9NY61 560 aaKnown RBP eCLIP21.57■■□□□ 1.04
FAM239A-203ENST00000456563 CLRN2A0PK11 232 aa21.56■■□□□ 1.04
FAM239A-203ENST00000456563 TOMM70O94826 608 aa21.56■■□□□ 1.04
FAM239A-203ENST00000456563 PLCG2P16885 1265 aa21.56■■□□□ 1.04
FAM239A-203ENST00000456563 FKBP1CQ5VVH2 108 aa21.56■■□□□ 1.04
FAM239A-203ENST00000456563 CHADLQ6NUI6 762 aa21.56■■□□□ 1.04
FAM239A-203ENST00000456563 APOBEC3FQ8IUX4 373 aaKnown RBP21.56■■□□□ 1.04
FAM239A-203ENST00000456563 TMOD2Q9NZR1 351 aa21.56■■□□□ 1.04
FAM239A-203ENST00000456563 ZMYM1Q5SVZ6 1142 aa21.55■■□□□ 1.04
FAM239A-203ENST00000456563 MIGA1Q8NAN2 632 aa21.55■■□□□ 1.04
FAM239A-203ENST00000456563 RBM46Q8TBY0 533 aaKnown RBP21.55■■□□□ 1.04
FAM239A-203ENST00000456563 RIOK1Q9BRS2 568 aaKnown RBP21.55■■□□□ 1.04
FAM239A-203ENST00000456563 MAGEB6P1A0A0J9YX57 407 aa21.54■■□□□ 1.04
FAM239A-203ENST00000456563 DYNLL1P63167 89 aaKnown RBP21.54■■□□□ 1.04
FAM239A-203ENST00000456563 MAP1SQ66K74 1059 aaPredicted RBP21.54■■□□□ 1.04
FAM239A-203ENST00000456563 OSBP2Q969R2 916 aa21.54■■□□□ 1.04
FAM239A-203ENST00000456563 IDI2Q9BXS1 227 aa21.54■■□□□ 1.04
FAM239A-203ENST00000456563 PUS7LQ9H0K6 701 aaKnown RBP21.54■■□□□ 1.04
FAM239A-203ENST00000456563 VEZTQ9HBM0 779 aa21.54■■□□□ 1.04
FAM239A-203ENST00000456563 MYH7P12883 1935 aa21.54■■□□□ 1.04
FAM239A-203ENST00000456563 ECM29Q5VYK3 1845 aa21.53■■□□□ 1.04
FAM239A-203ENST00000456563 HIP1O00291 1037 aa21.53■■□□□ 1.04
FAM239A-203ENST00000456563 TNFAIP1Q13829 316 aa21.53■■□□□ 1.04
FAM239A-203ENST00000456563 CDC37L1Q7L3B6 337 aa21.53■■□□□ 1.04
FAM239A-203ENST00000456563 SULF1Q8IWU6 871 aa21.53■■□□□ 1.04
FAM239A-203ENST00000456563 SMC1BQ8NDV3 1235 aa21.53■■□□□ 1.04
FAM239A-203ENST00000456563 SH3RF3Q8TEJ3 882 aaPredicted RBP21.53■■□□□ 1.04
FAM239A-203ENST00000456563 NPM3O75607 178 aaKnown RBP21.52■■□□□ 1.04
FAM239A-203ENST00000456563 WDHD1O75717 1129 aaPredicted RBP21.52■■□□□ 1.04
FAM239A-203ENST00000456563 CACNB3P54284 484 aa21.52■■□□□ 1.04
FAM239A-203ENST00000456563 KRT26Q7Z3Y9 468 aa21.52■■□□□ 1.04
FAM239A-203ENST00000456563 TEX11Q8IYF3 940 aa21.52■■□□□ 1.04
FAM239A-203ENST00000456563 TCP10L2B9ZVM9 353 aa21.51■■□□□ 1.03
FAM239A-203ENST00000456563 MBD4O95243 580 aa21.51■■□□□ 1.03
FAM239A-203ENST00000456563 TNNI2P48788 182 aa21.51■■□□□ 1.03
FAM239A-203ENST00000456563 NFIAQ12857 509 aa21.51■■□□□ 1.03
FAM239A-203ENST00000456563 FAM83AQ86UY5 434 aa21.51■■□□□ 1.03
FAM239A-203ENST00000456563 LCORLQ8N3X6 602 aa21.51■■□□□ 1.03
FAM239A-203ENST00000456563 AIDAQ96BJ3 306 aa21.51■■□□□ 1.03
FAM239A-203ENST00000456563 HELLSQ9NRZ9 838 aa21.51■■□□□ 1.03
FAM239A-203ENST00000456563 PPP2R3BQ9Y5P8 575 aa21.51■■□□□ 1.03
FAM239A-203ENST00000456563 ENTPD3O75355 529 aa21.5■■□□□ 1.03
FAM239A-203ENST00000456563 FSTL1Q12841 308 aa21.5■■□□□ 1.03
FAM239A-203ENST00000456563 RASA3Q14644 834 aa21.5■■□□□ 1.03
FAM239A-203ENST00000456563 USP48Q86UV5 1035 aa21.5■■□□□ 1.03
FAM239A-203ENST00000456563 FAM227BQ96M60 508 aa21.5■■□□□ 1.03
FAM239A-203ENST00000456563 SEC62Q99442 399 aaKnown RBP21.5■■□□□ 1.03
FAM239A-203ENST00000456563 GLIS2Q9BZE0 524 aaPredicted RBP21.5■■□□□ 1.03
FAM239A-203ENST00000456563 DEFB129Q9H1M3 183 aa21.5■■□□□ 1.03
FAM239A-203ENST00000456563 ARMT1Q9H993 441 aa21.5■■□□□ 1.03
FAM239A-203ENST00000456563 FAM198AQ9UFP1 575 aa21.5■■□□□ 1.03
FAM239A-203ENST00000456563 CNTNAP1P78357 1384 aa21.49■■□□□ 1.03
FAM239A-203ENST00000456563 ADM5C9JUS6 153 aa21.49■■□□□ 1.03
FAM239A-203ENST00000456563 M0R2C6 588 aa21.49■■□□□ 1.03
FAM239A-203ENST00000456563 ITGBL1O95965 494 aaPredicted RBP21.49■■□□□ 1.03
FAM239A-203ENST00000456563 NMIQ13287 307 aaPredicted RBP21.49■■□□□ 1.03
FAM239A-203ENST00000456563 FAM151AQ8WW52 585 aa21.49■■□□□ 1.03
FAM239A-203ENST00000456563 STRBPQ96SI9 672 aaKnown RBP21.49■■□□□ 1.03
FAM239A-203ENST00000456563 CRNKL1Q9BZJ0 848 aaKnown RBP21.49■■□□□ 1.03
FAM239A-203ENST00000456563 DDX4Q9NQI0 724 aaKnown RBP21.49■■□□□ 1.03
FAM239A-203ENST00000456563 DIAPH3Q9NSV4 1193 aa21.49■■□□□ 1.03
FAM239A-203ENST00000456563 SCAF8Q9UPN6 1271 aaKnown RBP21.49■■□□□ 1.03
FAM239A-203ENST00000456563 A0A0D9SFI3 127 aa21.48■■□□□ 1.03
FAM239A-203ENST00000456563 GPAA1O43292 621 aa21.48■■□□□ 1.03
FAM239A-203ENST00000456563 CHMLP26374 656 aa21.48■■□□□ 1.03
FAM239A-203ENST00000456563 MCMDC2Q4G0Z9 681 aa21.48■■□□□ 1.03
FAM239A-203ENST00000456563 TGFBRAP1Q8WUH2 860 aa21.48■■□□□ 1.03
FAM239A-203ENST00000456563 AK9Q5TCS8 1911 aa21.48■■□□□ 1.03
FAM239A-203ENST00000456563 GNAT2P19087 354 aa21.46■■□□□ 1.03
FAM239A-203ENST00000456563 USP5P45974 858 aa21.46■■□□□ 1.03
FAM239A-203ENST00000456563 TCP10Q12799 353 aa21.46■■□□□ 1.03
FAM239A-203ENST00000456563 PICALMQ13492 652 aa21.46■■□□□ 1.03
FAM239A-203ENST00000456563 CWC27Q6UX04 472 aaKnown RBP21.46■■□□□ 1.03
FAM239A-203ENST00000456563 POLR2AP24928 1970 aaKnown RBP21.46■■□□□ 1.03
FAM239A-203ENST00000456563 RPAP1Q9BWH6 1393 aaPredicted RBP21.46■■□□□ 1.03
FAM239A-203ENST00000456563 MAPKAPK5Q8IW41 473 aa21.45■■□□□ 1.02
FAM239A-203ENST00000456563 ZFPM1Q8IX07 1006 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms