RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 CALD1Q05682 793 aaKnown RBP6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 DHX9Q08211 1270 aaKnown RBP6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 PLEKHO1Q53GL0 409 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 ATCAYQ86WG3 371 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 GJD3Q8N144 294 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 CCDC136Q96JN2 1154 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 THUMPD2Q9BTF0 503 aaKnown RBP6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 CARD10Q9BWT7 1032 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 TSPAN10Q9H1Z9 355 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 PRDM16Q9HAZ2 1276 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 RCAN3Q9UKA8 241 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 G3BP2Q9UN86 482 aaKnown RBP6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 PRKAB1Q9Y478 270 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 MAP4K5Q9Y4K4 846 aa6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 FAM208AQ9UK61 1670 aaKnown RBP6.55□□□□□ -1.36
HMGB1P4-201ENST00000455362 GNAT3A8MTJ3 354 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 TMEM229AB2RXF0 380 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 ERVH48-1M5A8F1 160 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 ADAMTS2O95450 1211 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 ZNF853P0CG23 659 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 CHMP4BP1P59074 171 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 DCTN1Q14203 1278 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 AMOTQ4VCS5 1084 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 INTS6LQ5JSJ4 861 aaKnown RBP6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 CCAR1Q8IX12 1150 aaKnown RBP6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 RTF1Q92541 710 aaKnown RBP6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 CFHR5Q9BXR6 569 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 TRIM55Q9BYV6 548 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 IRF2BPLQ9H1B7 796 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 BTG4Q9NY30 223 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 SIRPGQ9P1W8 387 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 JCADQ9P266 1359 aa6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 COL14A1Q05707 1796 aaKnown RBP6.54□□□□□ -1.36
HMGB1P4-201ENST00000455362 COL5A2P05997 1499 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 RNF123Q5XPI4 1314 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 A0A1W2PRU2 124 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 RNF223E7ERA6 249 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 CHL1O00533 1208 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 S1PR4O95977 384 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 PCSK2P16519 638 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 TATP17735 454 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 HSPA1LP34931 641 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 GNAI1P63096 354 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 ERVK-9P63128 1117 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 NFX1Q12986 1120 aaKnown RBP6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 SERINC3Q13530 473 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 ZNF530Q6P9A1 599 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 TOM1L2Q6ZVM7 507 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 MCM10Q7L590 875 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 CYP2U1Q7Z449 544 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 TTC16Q8NEE8 873 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 IL17REQ8NFR9 667 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 RAPGEF4Q8WZA2 1011 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 TSR2Q969E8 191 aaKnown RBP6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 RNPC3Q96LT9 517 aaKnown RBP6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 TMX1Q9H3N1 280 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 STRN4Q9NRL3 753 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 DDX56Q9NY93 547 aaKnown RBP6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 SERTAD1Q9UHV2 236 aa6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 V9GY48 417 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P4-201ENST00000455362 FANCIQ9NVI1 1328 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 EIF1AYO14602 144 aaKnown RBP6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 PPEF1O14829 653 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 ZBTB39O15060 712 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 INHAP05111 366 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 SCTRP47872 440 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 EXOSC9Q06265 439 aaKnown RBP6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 TAF1CQ15572 869 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 PLEKHG4Q58EX7 1191 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 AKAP4Q5JQC9 854 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 PLA2G2CQ5R387 149 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 EDEM1Q92611 657 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 SEC16BQ96JE7 1060 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 BCCIPQ9P287 314 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 LAS1LQ9Y4W2 734 aaKnown RBP6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 MAP3K5Q99683 1374 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 PLEKHG2Q9H7P9 1386 aa6.52□□□□□ -1.37
HMGB1P4-201ENST00000455362 CRB1P82279 1406 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 KAT6BQ8WYB5 2073 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 VIRMAQ69YN4 1812 aaKnown RBP6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 CDC45O75419 566 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 SCNN1DP51172 638 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 WNT7BP56706 349 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 ORC1Q13415 861 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 ARID5BQ14865 1188 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 TAF7Q15545 349 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 C1orf141Q5JVX7 400 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 RPUSD2Q8IZ73 545 aaKnown RBP6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 PRPF38AQ8NAV1 312 aaKnown RBP6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 DNAJC25Q9H1X3 360 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 C12orf49Q9H741 205 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 ZNF408Q9H9D4 720 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 LGR6Q9HBX8 967 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 MBIPQ9NS73 344 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 GABBR1Q9UBS5 961 aa6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 R3HCC1Q9Y3T6 440 aaKnown RBP6.51□□□□□ -1.37
HMGB1P4-201ENST00000455362 SPATA31A6Q5VVP1 1343 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 MEGF6O75095 1541 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 PLCH1Q4KWH8 1693 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms