RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 APOBEC3FQ8IUX4 373 aaKnown RBP17.27■□□□□ 0.36
HMGXB4-204ENST00000455359 DCPSQ96C86 337 aaKnown RBP17.27■□□□□ 0.36
HMGXB4-204ENST00000455359 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
HMGXB4-204ENST00000455359 ZNF532Q9HCE3 1301 aa17.27■□□□□ 0.36
HMGXB4-204ENST00000455359 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
HMGXB4-204ENST00000455359 BMP2KLQ5H9B9 411 aa17.26■□□□□ 0.35
HMGXB4-204ENST00000455359 APPBP2Q92624 585 aa17.26■□□□□ 0.35
HMGXB4-204ENST00000455359 USP40Q9NVE5 1235 aa17.26■□□□□ 0.35
HMGXB4-204ENST00000455359 ZNF70Q9UC06 446 aaPredicted RBP17.26■□□□□ 0.35
HMGXB4-204ENST00000455359 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
HMGXB4-204ENST00000455359 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
HMGXB4-204ENST00000455359 ANGEL2Q5VTE6 544 aaKnown RBP17.25■□□□□ 0.35
HMGXB4-204ENST00000455359 CDC42EP5Q6NZY7 148 aa17.25■□□□□ 0.35
HMGXB4-204ENST00000455359 CDC37L1Q7L3B6 337 aa17.25■□□□□ 0.35
HMGXB4-204ENST00000455359 SMC1BQ8NDV3 1235 aa17.25■□□□□ 0.35
HMGXB4-204ENST00000455359 RILPL2Q969X0 211 aa17.25■□□□□ 0.35
HMGXB4-204ENST00000455359 TDRD3Q9H7E2 651 aaKnown RBP17.25■□□□□ 0.35
HMGXB4-204ENST00000455359 GGA3Q9NZ52 723 aa17.25■□□□□ 0.35
HMGXB4-204ENST00000455359 PPP2R3BQ9Y5P8 575 aa17.25■□□□□ 0.35
HMGXB4-204ENST00000455359 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 SDSP20132 328 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 TNNI2P48788 182 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 RGS3P49796 1198 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 RHBDL3P58872 404 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 FSTL1Q12841 308 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 ADGRA1Q86SQ6 560 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 FAM83AQ86UY5 434 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 SULF1Q8IWU6 871 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 IDI2Q9BXS1 227 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 PCDHAC2Q9Y5I4 1007 aa17.24■□□□□ 0.35
HMGXB4-204ENST00000455359 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
HMGXB4-204ENST00000455359 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
HMGXB4-204ENST00000455359 ZMYM1Q5SVZ6 1142 aa17.23■□□□□ 0.35
HMGXB4-204ENST00000455359 RIOK1Q9BRS2 568 aaKnown RBP17.23■□□□□ 0.35
HMGXB4-204ENST00000455359 HELLSQ9NRZ9 838 aa17.23■□□□□ 0.35
HMGXB4-204ENST00000455359 AATFQ9NY61 560 aaKnown RBP eCLIP17.23■□□□□ 0.35
HMGXB4-204ENST00000455359 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
HMGXB4-204ENST00000455359 ENTPD3O75355 529 aa17.22■□□□□ 0.35
HMGXB4-204ENST00000455359 KRT26Q7Z3Y9 468 aa17.22■□□□□ 0.35
HMGXB4-204ENST00000455359 AIDAQ96BJ3 306 aa17.22■□□□□ 0.35
HMGXB4-204ENST00000455359 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
HMGXB4-204ENST00000455359 CLRN2A0PK11 232 aa17.21■□□□□ 0.35
HMGXB4-204ENST00000455359 WDHD1O75717 1129 aaPredicted RBP17.21■□□□□ 0.35
HMGXB4-204ENST00000455359 GNAT2P19087 354 aa17.21■□□□□ 0.35
HMGXB4-204ENST00000455359 MAP1SQ66K74 1059 aaPredicted RBP17.21■□□□□ 0.35
HMGXB4-204ENST00000455359 TEX11Q8IYF3 940 aa17.21■□□□□ 0.35
HMGXB4-204ENST00000455359 MIGA1Q8NAN2 632 aa17.21■□□□□ 0.35
HMGXB4-204ENST00000455359 DEFB129Q9H1M3 183 aa17.21■□□□□ 0.35
HMGXB4-204ENST00000455359 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.35
HMGXB4-204ENST00000455359 SH3RF3Q8TEJ3 882 aaPredicted RBP17.21■□□□□ 0.34
HMGXB4-204ENST00000455359 FAM151AQ8WW52 585 aa17.21■□□□□ 0.34
HMGXB4-204ENST00000455359 OSBP2Q969R2 916 aa17.21■□□□□ 0.34
HMGXB4-204ENST00000455359 CRNKL1Q9BZJ0 848 aaKnown RBP17.21■□□□□ 0.34
HMGXB4-204ENST00000455359 PUS7LQ9H0K6 701 aaKnown RBP17.21■□□□□ 0.34
HMGXB4-204ENST00000455359 DIAPH3Q9NSV4 1193 aa17.21■□□□□ 0.34
HMGXB4-204ENST00000455359 MBD4O95243 580 aa17.2■□□□□ 0.34
HMGXB4-204ENST00000455359 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
HMGXB4-204ENST00000455359 RASA3Q14644 834 aa17.2■□□□□ 0.34
HMGXB4-204ENST00000455359 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
HMGXB4-204ENST00000455359 SKAP1Q86WV1 359 aa17.2■□□□□ 0.34
HMGXB4-204ENST00000455359 HOOK2Q96ED9 719 aa17.2■□□□□ 0.34
HMGXB4-204ENST00000455359 STRBPQ96SI9 672 aaKnown RBP17.2■□□□□ 0.34
HMGXB4-204ENST00000455359 RPAP1Q9BWH6 1393 aaPredicted RBP17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 MAST2Q6P0Q8 1798 aa17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 ADAMTSL1Q8N6G6 1762 aa17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 TCP10L2B9ZVM9 353 aa17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 ITGBL1O95965 494 aaPredicted RBP17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 DYNLL1P63167 89 aaKnown RBP17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 NFIAQ12857 509 aa17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 SUPT20HL1Q3ZLR7 823 aa17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 GIMAP6Q6P9H5 292 aa17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 USP48Q86UV5 1035 aa17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 RUFY2Q8WXA3 655 aa17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 FAM198AQ9UFP1 575 aa17.19■□□□□ 0.34
HMGXB4-204ENST00000455359 DOCK2Q92608 1830 aa17.18■□□□□ 0.34
HMGXB4-204ENST00000455359 GPAA1O43292 621 aa17.18■□□□□ 0.34
HMGXB4-204ENST00000455359 CACNB3P54284 484 aa17.18■□□□□ 0.34
HMGXB4-204ENST00000455359 LCORLQ8N3X6 602 aa17.18■□□□□ 0.34
HMGXB4-204ENST00000455359 RAD50Q92878 1312 aa17.18■□□□□ 0.34
HMGXB4-204ENST00000455359 DDRGK1Q96HY6 314 aa17.18■□□□□ 0.34
HMGXB4-204ENST00000455359 GLIS2Q9BZE0 524 aaPredicted RBP17.18■□□□□ 0.34
HMGXB4-204ENST00000455359 DHX36Q9H2U1 1008 aaKnown RBP17.18■□□□□ 0.34
HMGXB4-204ENST00000455359 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
HMGXB4-204ENST00000455359 PASKQ96RG2 1323 aa17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 CHGBP05060 677 aa17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 CHMLP26374 656 aa17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 NF2P35240 595 aa17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 USP5P45974 858 aa17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 NMIQ13287 307 aaPredicted RBP17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 SLFNL1Q499Z3 407 aa17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 CASC1Q6TDU7 716 aa17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 TGFBRAP1Q8WUH2 860 aa17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 OSBPL5Q9H0X9 879 aaPredicted RBP17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
HMGXB4-204ENST00000455359 COL2A1P02458 1487 aaPredicted RBP17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 CNTNAP1P78357 1384 aa17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 ATRNL1Q5VV63 1379 aa17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 FLT1P17948 1338 aa17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 ADM5C9JUS6 153 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms