RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ANKRD34AQ69YU3 496 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 DDX54Q8TDD1 881 aaKnown RBP6.83□□□□□ -1.32
LINC00393-202ENST00000452852 GIPC2Q8TF65 315 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 USP35Q9P2H5 1018 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 AKAP2Q9Y2D5 859 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 CEP164Q9UPV0 1460 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 WDR62O43379 1518 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 SART1O43290 800 aaKnown RBP6.82□□□□□ -1.32
LINC00393-202ENST00000452852 ECEL1O95672 775 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 XRCC5P13010 732 aaKnown RBP6.82□□□□□ -1.32
LINC00393-202ENST00000452852 PREPP48147 710 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 FDX2Q6P4F2 183 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 UTP4Q969X6 686 aaKnown RBP6.82□□□□□ -1.32
LINC00393-202ENST00000452852 ZFYVE1Q9HBF4 777 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 IGSF5Q9NSI5 407 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 TOP2AP11388 1531 aaKnown RBP6.81□□□□□ -1.32
LINC00393-202ENST00000452852 COL17A1Q9UMD9 1497 aaPredicted RBP6.81□□□□□ -1.32
LINC00393-202ENST00000452852 COL19A1Q14993 1142 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 UVSSAQ2YD98 709 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 C12orf50Q8NA57 414 aaPredicted RBP6.81□□□□□ -1.32
LINC00393-202ENST00000452852 SMG8Q8ND04 991 aaKnown RBP6.81□□□□□ -1.32
LINC00393-202ENST00000452852 C3orf58Q8NDZ4 430 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 MYRFLQ96LU7 910 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 CORO1BQ9BR76 489 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 SUGCTQ9HAC7 445 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 CYP4F12Q9HCS2 524 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 SPG7Q9UQ90 795 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 RAXQ9Y2V3 346 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 FANCD2Q9BXW9 1451 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 GIPC1O14908 333 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 DHX15O43143 795 aaKnown RBP6.8□□□□□ -1.32
LINC00393-202ENST00000452852 DRD2P14416 443 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 AP3B2Q13367 1082 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 EAPPQ56P03 285 aaPredicted RBP6.8□□□□□ -1.32
LINC00393-202ENST00000452852 NPAS4Q8IUM7 802 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 SRCIN1Q9C0H9 1055 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 TMEM39AQ9NV64 488 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 GPN3Q9UHW5 284 aaPredicted RBP6.8□□□□□ -1.32
LINC00393-202ENST00000452852 RSF1Q96T23 1441 aaPredicted RBP6.79□□□□□ -1.32
LINC00393-202ENST00000452852 ARID1BQ8NFD5 2236 aaPredicted RBP6.79□□□□□ -1.32
LINC00393-202ENST00000452852 PRPF40AO75400 957 aaKnown RBP6.79□□□□□ -1.32
LINC00393-202ENST00000452852 TIAF1O95411 115 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 BMP3P12645 472 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 GSTT1P30711 240 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 TAGLNQ01995 201 aaKnown RBP6.79□□□□□ -1.32
LINC00393-202ENST00000452852 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.79□□□□□ -1.32
LINC00393-202ENST00000452852 FMNL2Q96PY5 1086 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 C12orf49Q9H741 205 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 RNF19AQ9NV58 838 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 STOML1Q9UBI4 398 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 GAS2O43903 313 aaKnown RBP6.78□□□□□ -1.32
LINC00393-202ENST00000452852 PPP2R3AQ06190 1150 aa6.78□□□□□ -1.32
LINC00393-202ENST00000452852 SOX4Q06945 474 aaPredicted RBP6.78□□□□□ -1.32
LINC00393-202ENST00000452852 PDE3AQ14432 1141 aa6.78□□□□□ -1.32
LINC00393-202ENST00000452852 FAM20CQ8IXL6 584 aa6.78□□□□□ -1.32
LINC00393-202ENST00000452852 DUSP9Q99956 384 aaKnown RBP6.78□□□□□ -1.32
LINC00393-202ENST00000452852 KRTAP4-2Q9BYR5 136 aa6.78□□□□□ -1.32
LINC00393-202ENST00000452852 ZC3H12CQ9C0D7 883 aaKnown RBP6.78□□□□□ -1.32
LINC00393-202ENST00000452852 CFTRP13569 1480 aa6.78□□□□□ -1.32
LINC00393-202ENST00000452852 FSTP19883 344 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 GNA15P30679 374 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 HP1BP3Q5SSJ5 553 aaPredicted RBP6.77□□□□□ -1.33
LINC00393-202ENST00000452852 TPTE2Q6XPS3 522 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 TRIM42Q8IWZ5 723 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 C2CD4AQ8NCU7 369 aaPredicted RBP6.77□□□□□ -1.33
LINC00393-202ENST00000452852 FRMD6Q96NE9 622 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 KCNF1Q9H3M0 494 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 CCDC86Q9H6F5 360 aaKnown RBP6.77□□□□□ -1.33
LINC00393-202ENST00000452852 C7orf69Q9H7B7 122 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 RAD18Q9NS91 495 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 HMX2A2RU54 273 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 FBXO24O75426 580 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 GSTP1P09211 210 aaKnown RBP6.76□□□□□ -1.33
LINC00393-202ENST00000452852 USP17L7P0C7H9 530 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 ADH5P11766 374 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 LIG1P18858 919 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 SGO2Q562F6 1265 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 AKAP4Q5JQC9 854 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 BEND4Q6ZU67 534 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 CLEC10AQ8IUN9 316 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 STK35Q8TDR2 534 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 FAM8A1Q9UBU6 413 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 HIF3AQ9Y2N7 669 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 ENC1O14682 589 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 AOC2O75106 756 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 EIF4BP23588 611 aaKnown RBP6.75□□□□□ -1.33
LINC00393-202ENST00000452852 MAP4P27816 1152 aaKnown RBP6.75□□□□□ -1.33
LINC00393-202ENST00000452852 USP11P51784 963 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 FGD1P98174 961 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 ZNF326Q5BKZ1 582 aaKnown RBP6.75□□□□□ -1.33
LINC00393-202ENST00000452852 CDPF1Q6NVV7 123 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 PDZD3Q86UT5 571 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 SULF2Q8IWU5 870 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 WDR89Q96FK6 387 aaPredicted RBP6.75□□□□□ -1.33
LINC00393-202ENST00000452852 NECAB3Q96P71 396 aaPredicted RBP6.75□□□□□ -1.33
LINC00393-202ENST00000452852 FAM83CQ9BQN1 747 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 WDR18Q9BV38 432 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 PPM1HQ9ULR3 514 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 ZNF862O60290 1169 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 PAGE1O75459 146 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms