RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 BTDP43251 543 aa14.37□□□□□ -0.11
LINC00339-205ENST00000452322 BMP2KLQ5H9B9 411 aa14.37□□□□□ -0.11
LINC00339-205ENST00000452322 ADGRA1Q86SQ6 560 aa14.37□□□□□ -0.11
LINC00339-205ENST00000452322 RNF113AO15541 343 aaKnown RBP14.36□□□□□ -0.11
LINC00339-205ENST00000452322 BAG3O95817 575 aa14.36□□□□□ -0.11
LINC00339-205ENST00000452322 SDSP20132 328 aa14.36□□□□□ -0.11
LINC00339-205ENST00000452322 SPDYE2Q495Y8 402 aa14.36□□□□□ -0.11
LINC00339-205ENST00000452322 LDHDQ86WU2 507 aa14.36□□□□□ -0.11
LINC00339-205ENST00000452322 CERS3Q8IU89 383 aa14.36□□□□□ -0.11
LINC00339-205ENST00000452322 NOL10Q9BSC4 688 aaKnown RBP14.36□□□□□ -0.11
LINC00339-205ENST00000452322 PGAP2Q9UHJ9 254 aa14.36□□□□□ -0.11
LINC00339-205ENST00000452322 PITPNM2Q9BZ72 1349 aa14.36□□□□□ -0.11
LINC00339-205ENST00000452322 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
LINC00339-205ENST00000452322 POTEJP0CG39 1038 aa14.35□□□□□ -0.11
LINC00339-205ENST00000452322 PPP4CP60510 307 aa14.35□□□□□ -0.11
LINC00339-205ENST00000452322 APPBP2Q92624 585 aa14.35□□□□□ -0.11
LINC00339-205ENST00000452322 TDRD3Q9H7E2 651 aaKnown RBP14.35□□□□□ -0.11
LINC00339-205ENST00000452322 AATFQ9NY61 560 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC00339-205ENST00000452322 GGA3Q9NZ52 723 aa14.35□□□□□ -0.11
LINC00339-205ENST00000452322 ASTN2O75129 1339 aaPredicted RBP14.35□□□□□ -0.11
LINC00339-205ENST00000452322 CHGBP05060 677 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 PLCG2P16885 1265 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 RHBDL3P58872 404 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
LINC00339-205ENST00000452322 SLFNL1Q499Z3 407 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 ANGEL2Q5VTE6 544 aaKnown RBP14.34□□□□□ -0.11
LINC00339-205ENST00000452322 CDC42EP5Q6NZY7 148 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 MIGA1Q8NAN2 632 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 USP40Q9NVE5 1235 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 TMOD2Q9NZR1 351 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 ZNF70Q9UC06 446 aaPredicted RBP14.34□□□□□ -0.11
LINC00339-205ENST00000452322 CLEC11AQ9Y240 323 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 MAGEB6P1A0A0J9YX57 407 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 CLRN2A0PK11 232 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 HIP1O00291 1037 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 ZMYM1Q5SVZ6 1142 aa14.34□□□□□ -0.11
LINC00339-205ENST00000452322 APOBEC3FQ8IUX4 373 aaKnown RBP14.34□□□□□ -0.11
LINC00339-205ENST00000452322 DCPSQ96C86 337 aaKnown RBP14.34□□□□□ -0.11
LINC00339-205ENST00000452322 RIOK1Q9BRS2 568 aaKnown RBP14.34□□□□□ -0.11
LINC00339-205ENST00000452322 TOMM70O94826 608 aa14.33□□□□□ -0.12
LINC00339-205ENST00000452322 DYNLL1P63167 89 aaKnown RBP14.33□□□□□ -0.12
LINC00339-205ENST00000452322 TNFAIP1Q13829 316 aa14.33□□□□□ -0.12
LINC00339-205ENST00000452322 FKBP1CQ5VVH2 108 aa14.33□□□□□ -0.12
LINC00339-205ENST00000452322 OSBP2Q969R2 916 aa14.33□□□□□ -0.12
LINC00339-205ENST00000452322 IDI2Q9BXS1 227 aa14.33□□□□□ -0.12
LINC00339-205ENST00000452322 PUS7LQ9H0K6 701 aaKnown RBP14.33□□□□□ -0.12
LINC00339-205ENST00000452322 VEZTQ9HBM0 779 aa14.33□□□□□ -0.12
LINC00339-205ENST00000452322 MBD4O95243 580 aa14.32□□□□□ -0.12
LINC00339-205ENST00000452322 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
LINC00339-205ENST00000452322 SULF1Q8IWU6 871 aa14.32□□□□□ -0.12
LINC00339-205ENST00000452322 TEX11Q8IYF3 940 aa14.32□□□□□ -0.12
LINC00339-205ENST00000452322 RBM46Q8TBY0 533 aaKnown RBP14.32□□□□□ -0.12
LINC00339-205ENST00000452322 SH3RF3Q8TEJ3 882 aaPredicted RBP14.32□□□□□ -0.12
LINC00339-205ENST00000452322 AIDAQ96BJ3 306 aa14.32□□□□□ -0.12
LINC00339-205ENST00000452322 HELLSQ9NRZ9 838 aa14.32□□□□□ -0.12
LINC00339-205ENST00000452322 DIAPH3Q9NSV4 1193 aa14.32□□□□□ -0.12
LINC00339-205ENST00000452322 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
LINC00339-205ENST00000452322 WDHD1O75717 1129 aaPredicted RBP14.31□□□□□ -0.12
LINC00339-205ENST00000452322 TNNI2P48788 182 aa14.31□□□□□ -0.12
LINC00339-205ENST00000452322 CACNB3P54284 484 aa14.31□□□□□ -0.12
LINC00339-205ENST00000452322 MAP1SQ66K74 1059 aaPredicted RBP14.31□□□□□ -0.12
LINC00339-205ENST00000452322 CDC37L1Q7L3B6 337 aa14.31□□□□□ -0.12
LINC00339-205ENST00000452322 FAM83AQ86UY5 434 aa14.31□□□□□ -0.12
LINC00339-205ENST00000452322 LCORLQ8N3X6 602 aa14.31□□□□□ -0.12
LINC00339-205ENST00000452322 PPP2R3BQ9Y5P8 575 aa14.31□□□□□ -0.12
LINC00339-205ENST00000452322 FOCADQ5VW36 1801 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 POLR2AP24928 1970 aaKnown RBP14.3□□□□□ -0.12
LINC00339-205ENST00000452322 CDK5RAP2Q96SN8 1893 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 A0A0D9SFI3 127 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 TCP10L2B9ZVM9 353 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 M0R2C6 588 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 GPAA1O43292 621 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 ENTPD3O75355 529 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 NFIAQ12857 509 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 NMIQ13287 307 aaPredicted RBP14.3□□□□□ -0.12
LINC00339-205ENST00000452322 MCMDC2Q4G0Z9 681 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 KRT26Q7Z3Y9 468 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 SMC1BQ8NDV3 1235 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 FAM227BQ96M60 508 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 SEC62Q99442 399 aaKnown RBP14.3□□□□□ -0.12
LINC00339-205ENST00000452322 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
LINC00339-205ENST00000452322 ARMT1Q9H993 441 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 FAM198AQ9UFP1 575 aa14.3□□□□□ -0.12
LINC00339-205ENST00000452322 CNTNAP1P78357 1384 aa14.29□□□□□ -0.12
LINC00339-205ENST00000452322 RPAP1Q9BWH6 1393 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-205ENST00000452322 CHMLP26374 656 aa14.29□□□□□ -0.12
LINC00339-205ENST00000452322 RASA3Q14644 834 aa14.29□□□□□ -0.12
LINC00339-205ENST00000452322 CWC27Q6UX04 472 aaKnown RBP14.29□□□□□ -0.12
LINC00339-205ENST00000452322 FAM151AQ8WW52 585 aa14.29□□□□□ -0.12
LINC00339-205ENST00000452322 STRBPQ96SI9 672 aaKnown RBP14.29□□□□□ -0.12
LINC00339-205ENST00000452322 GLIS2Q9BZE0 524 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-205ENST00000452322 DEFB129Q9H1M3 183 aa14.29□□□□□ -0.12
LINC00339-205ENST00000452322 DDX4Q9NQI0 724 aaKnown RBP14.29□□□□□ -0.12
LINC00339-205ENST00000452322 RAD50Q92878 1312 aa14.29□□□□□ -0.12
LINC00339-205ENST00000452322 COL2A1P02458 1487 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-205ENST00000452322 ADM5C9JUS6 153 aa14.28□□□□□ -0.12
LINC00339-205ENST00000452322 GNAT2P19087 354 aa14.28□□□□□ -0.12
LINC00339-205ENST00000452322 USP5P45974 858 aa14.28□□□□□ -0.12
LINC00339-205ENST00000452322 FSTL1Q12841 308 aa14.28□□□□□ -0.12
LINC00339-205ENST00000452322 PICALMQ13492 652 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms