RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 CNTROBQ8N137 903 aa29.11■■■□□ 2.25
CPSF4-207ENST00000451876 CLEC11AQ9Y240 323 aa29.11■■■□□ 2.25
CPSF4-207ENST00000451876 GPR75-ASB3A0A0A6YYF3 556 aa29.1■■■□□ 2.25
CPSF4-207ENST00000451876 LDHDQ86WU2 507 aa29.1■■■□□ 2.25
CPSF4-207ENST00000451876 SCAF8Q9UPN6 1271 aaKnown RBP29.1■■■□□ 2.25
CPSF4-207ENST00000451876 MIGA1Q8NAN2 632 aa29.09■■■□□ 2.25
CPSF4-207ENST00000451876 AATFQ9NY61 560 aaKnown RBP eCLIP29.09■■■□□ 2.25
CPSF4-207ENST00000451876 PGAP2Q9UHJ9 254 aa29.09■■■□□ 2.25
CPSF4-207ENST00000451876 FOCADQ5VW36 1801 aa29.09■■■□□ 2.25
CPSF4-207ENST00000451876 SDSP20132 328 aa29.09■■■□□ 2.25
CPSF4-207ENST00000451876 SPDYE2Q495Y8 402 aa29.09■■■□□ 2.25
CPSF4-207ENST00000451876 CDC42EP5Q6NZY7 148 aa29.09■■■□□ 2.25
CPSF4-207ENST00000451876 ZC3H15Q8WU90 426 aaKnown RBP29.09■■■□□ 2.25
CPSF4-207ENST00000451876 MYO1BO43795 1136 aa29.08■■■□□ 2.25
CPSF4-207ENST00000451876 CACNB3P54284 484 aa29.08■■■□□ 2.25
CPSF4-207ENST00000451876 UBE3CQ15386 1083 aa29.08■■■□□ 2.25
CPSF4-207ENST00000451876 ZSCAN25Q6NSZ9 544 aa29.08■■■□□ 2.25
CPSF4-207ENST00000451876 ZNF70Q9UC06 446 aaPredicted RBP29.08■■■□□ 2.25
CPSF4-207ENST00000451876 MAP1SQ66K74 1059 aaPredicted RBP29.07■■■□□ 2.24
CPSF4-207ENST00000451876 TMED8Q6PL24 325 aaPredicted RBP29.07■■■□□ 2.24
CPSF4-207ENST00000451876 RNF113AO15541 343 aaKnown RBP29.06■■■□□ 2.24
CPSF4-207ENST00000451876 RHBDL3P58872 404 aa29.06■■■□□ 2.24
CPSF4-207ENST00000451876 DYNLL1P63167 89 aaKnown RBP29.06■■■□□ 2.24
CPSF4-207ENST00000451876 VEZTQ9HBM0 779 aa29.05■■■□□ 2.24
CPSF4-207ENST00000451876 USP40Q9NVE5 1235 aa29.05■■■□□ 2.24
CPSF4-207ENST00000451876 RFX7Q2KHR2 1363 aa29.05■■■□□ 2.24
CPSF4-207ENST00000451876 ZFYP08048 801 aaPredicted RBP29.05■■■□□ 2.24
CPSF4-207ENST00000451876 RIOK1Q9BRS2 568 aaKnown RBP29.05■■■□□ 2.24
CPSF4-207ENST00000451876 PUS7LQ9H0K6 701 aaKnown RBP29.05■■■□□ 2.24
CPSF4-207ENST00000451876 PITPNM2Q9BZ72 1349 aa29.05■■■□□ 2.24
CPSF4-207ENST00000451876 PPP4CP60510 307 aa29.04■■■□□ 2.24
CPSF4-207ENST00000451876 SH3RF3Q8TEJ3 882 aaPredicted RBP29.04■■■□□ 2.24
CPSF4-207ENST00000451876 DCPSQ96C86 337 aaKnown RBP29.04■■■□□ 2.24
CPSF4-207ENST00000451876 NOL10Q9BSC4 688 aaKnown RBP29.04■■■□□ 2.24
CPSF4-207ENST00000451876 TOMM70O94826 608 aa29.03■■■□□ 2.24
CPSF4-207ENST00000451876 BAG3O95817 575 aa29.03■■■□□ 2.24
CPSF4-207ENST00000451876 CHADLQ6NUI6 762 aa29.03■■■□□ 2.24
CPSF4-207ENST00000451876 APPBP2Q92624 585 aa29.03■■■□□ 2.24
CPSF4-207ENST00000451876 OSBP2Q969R2 916 aa29.03■■■□□ 2.24
CPSF4-207ENST00000451876 NFIAQ12857 509 aa29.02■■■□□ 2.24
CPSF4-207ENST00000451876 BMP2KLQ5H9B9 411 aa29.02■■■□□ 2.24
CPSF4-207ENST00000451876 SEC62Q99442 399 aaKnown RBP29.02■■■□□ 2.24
CPSF4-207ENST00000451876 MAGEB6P1A0A0J9YX57 407 aa29.02■■■□□ 2.24
CPSF4-207ENST00000451876 TCP10L2B9ZVM9 353 aa29.02■■■□□ 2.24
CPSF4-207ENST00000451876 LRRFIP1Q32MZ4 808 aaKnown RBP29.02■■■□□ 2.24
CPSF4-207ENST00000451876 DLK2Q6UY11 383 aa29.02■■■□□ 2.24
CPSF4-207ENST00000451876 LCORLQ8N3X6 602 aa29.02■■■□□ 2.24
CPSF4-207ENST00000451876 GLIS2Q9BZE0 524 aaPredicted RBP29.02■■■□□ 2.24
CPSF4-207ENST00000451876 ADM5C9JUS6 153 aa29.01■■■□□ 2.23
CPSF4-207ENST00000451876 WDHD1O75717 1129 aaPredicted RBP29.01■■■□□ 2.23
CPSF4-207ENST00000451876 MBD4O95243 580 aa29.01■■■□□ 2.23
CPSF4-207ENST00000451876 ZMYM1Q5SVZ6 1142 aa29.01■■■□□ 2.23
CPSF4-207ENST00000451876 KRT26Q7Z3Y9 468 aa29.01■■■□□ 2.23
CPSF4-207ENST00000451876 TMOD2Q9NZR1 351 aa29.01■■■□□ 2.23
CPSF4-207ENST00000451876 CNTNAP1P78357 1384 aa29■■■□□ 2.23
CPSF4-207ENST00000451876 APOBEC3FQ8IUX4 373 aaKnown RBP29■■■□□ 2.23
CPSF4-207ENST00000451876 FAM227BQ96M60 508 aa29■■■□□ 2.23
CPSF4-207ENST00000451876 ARMT1Q9H993 441 aa29■■■□□ 2.23
CPSF4-207ENST00000451876 NAV1Q8NEY1 1877 aa28.99■■■□□ 2.23
CPSF4-207ENST00000451876 M0R2C6 588 aa28.99■■■□□ 2.23
CPSF4-207ENST00000451876 SULF1Q8IWU6 871 aa28.99■■■□□ 2.23
CPSF4-207ENST00000451876 RBM46Q8TBY0 533 aaKnown RBP28.99■■■□□ 2.23
CPSF4-207ENST00000451876 DDX4Q9NQI0 724 aaKnown RBP28.99■■■□□ 2.23
CPSF4-207ENST00000451876 FAM198AQ9UFP1 575 aa28.99■■■□□ 2.23
CPSF4-207ENST00000451876 A0A0D9SFI3 127 aa28.98■■■□□ 2.23
CPSF4-207ENST00000451876 TEX11Q8IYF3 940 aa28.98■■■□□ 2.23
CPSF4-207ENST00000451876 DDX60LQ5H9U9 1706 aaKnown RBP28.98■■■□□ 2.23
CPSF4-207ENST00000451876 PLCG2P16885 1265 aa28.98■■■□□ 2.23
CPSF4-207ENST00000451876 NMIQ13287 307 aaPredicted RBP28.98■■■□□ 2.23
CPSF4-207ENST00000451876 CDC37L1Q7L3B6 337 aa28.98■■■□□ 2.23
CPSF4-207ENST00000451876 USP48Q86UV5 1035 aa28.98■■■□□ 2.23
CPSF4-207ENST00000451876 TICAM2Q86XR7 235 aa28.98■■■□□ 2.23
CPSF4-207ENST00000451876 SMC1BQ8NDV3 1235 aa28.98■■■□□ 2.23
CPSF4-207ENST00000451876 AIDAQ96BJ3 306 aa28.98■■■□□ 2.23
CPSF4-207ENST00000451876 IDI2Q9BXS1 227 aa28.98■■■□□ 2.23
CPSF4-207ENST00000451876 FMR1Q06787 632 aaKnown RBP eCLIP28.97■■■□□ 2.23
CPSF4-207ENST00000451876 TCP10Q12799 353 aa28.97■■■□□ 2.23
CPSF4-207ENST00000451876 PICALMQ13492 652 aa28.97■■■□□ 2.23
CPSF4-207ENST00000451876 DEFB129Q9H1M3 183 aa28.97■■■□□ 2.23
CPSF4-207ENST00000451876 MYH1P12882 1939 aa28.96■■■□□ 2.23
CPSF4-207ENST00000451876 BAZ2AQ9UIF9 1905 aaKnown RBP28.96■■■□□ 2.23
CPSF4-207ENST00000451876 TRAF5O00463 557 aa28.96■■■□□ 2.23
CPSF4-207ENST00000451876 ITGBL1O95965 494 aaPredicted RBP28.96■■■□□ 2.23
CPSF4-207ENST00000451876 RASA3Q14644 834 aa28.96■■■□□ 2.23
CPSF4-207ENST00000451876 FKBP1CQ5VVH2 108 aa28.96■■■□□ 2.23
CPSF4-207ENST00000451876 PRAMEF18Q5VWM3 479 aa28.96■■■□□ 2.23
CPSF4-207ENST00000451876 TNFAIP1Q13829 316 aa28.95■■■□□ 2.23
CPSF4-207ENST00000451876 CERS3Q8IU89 383 aa28.95■■■□□ 2.23
CPSF4-207ENST00000451876 CDAN1Q8IWY9 1227 aa28.95■■■□□ 2.23
CPSF4-207ENST00000451876 ZFPM1Q8IX07 1006 aa28.95■■■□□ 2.23
CPSF4-207ENST00000451876 TGFBRAP1Q8WUH2 860 aa28.95■■■□□ 2.23
CPSF4-207ENST00000451876 TMEM39BQ9GZU3 492 aa28.95■■■□□ 2.23
CPSF4-207ENST00000451876 TRPM7Q96QT4 1865 aa28.95■■■□□ 2.22
CPSF4-207ENST00000451876 GPAA1O43292 621 aa28.94■■■□□ 2.22
CPSF4-207ENST00000451876 CWC27Q6UX04 472 aaKnown RBP28.94■■■□□ 2.22
CPSF4-207ENST00000451876 CCDC129Q6ZRS4 1044 aa28.94■■■□□ 2.22
CPSF4-207ENST00000451876 DIAPH3Q9NSV4 1193 aa28.94■■■□□ 2.22
CPSF4-207ENST00000451876 PRKAB2O43741 272 aa28.94■■■□□ 2.22
CPSF4-207ENST00000451876 FAM83AQ86UY5 434 aa28.94■■■□□ 2.22
CPSF4-207ENST00000451876 SDR42E1Q8WUS8 393 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms