RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 SAPCD2Q86UD0 394 aa17.5■□□□□ 0.39
COL3A1-203ENST00000450867 HAUS7Q99871 368 aa17.5■□□□□ 0.39
COL3A1-203ENST00000450867 VEZTQ9HBM0 779 aa17.5■□□□□ 0.39
COL3A1-203ENST00000450867 RAI14Q9P0K7 980 aa17.5■□□□□ 0.39
COL3A1-203ENST00000450867 AK9Q5TCS8 1911 aa17.5■□□□□ 0.39
COL3A1-203ENST00000450867 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
COL3A1-203ENST00000450867 RASA3Q14644 834 aa17.49■□□□□ 0.39
COL3A1-203ENST00000450867 TEPSINQ96N21 525 aa17.49■□□□□ 0.39
COL3A1-203ENST00000450867 IDI2Q9BXS1 227 aa17.49■□□□□ 0.39
COL3A1-203ENST00000450867 ANTXR1Q9H6X2 564 aa17.49■□□□□ 0.39
COL3A1-203ENST00000450867 GBA2Q9HCG7 927 aaPredicted RBP17.49■□□□□ 0.39
COL3A1-203ENST00000450867 TMOD2Q9NZR1 351 aa17.49■□□□□ 0.39
COL3A1-203ENST00000450867 SCAF8Q9UPN6 1271 aaKnown RBP17.49■□□□□ 0.39
COL3A1-203ENST00000450867 NDUFB9Q9Y6M9 179 aa17.49■□□□□ 0.39
COL3A1-203ENST00000450867 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
COL3A1-203ENST00000450867 BTDP43251 543 aa17.48■□□□□ 0.39
COL3A1-203ENST00000450867 TNNI2P48788 182 aa17.48■□□□□ 0.39
COL3A1-203ENST00000450867 RHBDL3P58872 404 aa17.48■□□□□ 0.39
COL3A1-203ENST00000450867 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
COL3A1-203ENST00000450867 COL2A1P02458 1487 aaPredicted RBP17.48■□□□□ 0.39
COL3A1-203ENST00000450867 NF2P35240 595 aa17.47■□□□□ 0.39
COL3A1-203ENST00000450867 PPP4CP60510 307 aa17.47■□□□□ 0.39
COL3A1-203ENST00000450867 MAP3K12Q12852 859 aa17.47■□□□□ 0.39
COL3A1-203ENST00000450867 ANKRD45Q5TZF3 282 aa17.47■□□□□ 0.39
COL3A1-203ENST00000450867 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
COL3A1-203ENST00000450867 C2orf69Q8N8R5 385 aa17.47■□□□□ 0.39
COL3A1-203ENST00000450867 KLRG1Q96E93 195 aa17.47■□□□□ 0.39
COL3A1-203ENST00000450867 BOLA2Q9H3K6 86 aa17.47■□□□□ 0.39
COL3A1-203ENST00000450867 ZNF408Q9H9D4 720 aa17.47■□□□□ 0.39
COL3A1-203ENST00000450867 PAG1Q9NWQ8 432 aa17.47■□□□□ 0.39
COL3A1-203ENST00000450867 STAP2Q9UGK3 403 aa17.47■□□□□ 0.39
COL3A1-203ENST00000450867 TCP10L2B9ZVM9 353 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 GOLIM4O00461 696 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 IDH1O75874 414 aaKnown RBP17.46■□□□□ 0.39
COL3A1-203ENST00000450867 CACNB3P54284 484 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 MAP3K11Q16584 847 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 SUPT20HL1Q3ZLR7 823 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 PRAMEF18Q5VWM3 479 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 ADGRA1Q86SQ6 560 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 PI4K2BQ8TCG2 481 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 OTUD7AQ8TE49 926 aaPredicted RBP17.46■□□□□ 0.39
COL3A1-203ENST00000450867 FAM151AQ8WW52 585 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 USP40Q9NVE5 1235 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 FAM198AQ9UFP1 575 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 MYH1P12882 1939 aa17.46■□□□□ 0.39
COL3A1-203ENST00000450867 DDX60LQ5H9U9 1706 aaKnown RBP17.46■□□□□ 0.39
COL3A1-203ENST00000450867 ENTPD3O75355 529 aa17.45■□□□□ 0.38
COL3A1-203ENST00000450867 WDHD1O75717 1129 aaPredicted RBP17.45■□□□□ 0.38
COL3A1-203ENST00000450867 MX1P20591 662 aa17.45■□□□□ 0.38
COL3A1-203ENST00000450867 NUCB1Q02818 461 aa17.45■□□□□ 0.38
COL3A1-203ENST00000450867 NFIAQ12857 509 aa17.45■□□□□ 0.38
COL3A1-203ENST00000450867 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
COL3A1-203ENST00000450867 CERS3Q8IU89 383 aa17.45■□□□□ 0.38
COL3A1-203ENST00000450867 DNAJC2Q99543 621 aaKnown RBP17.45■□□□□ 0.38
COL3A1-203ENST00000450867 TMEM39BQ9GZU3 492 aa17.45■□□□□ 0.38
COL3A1-203ENST00000450867 ABT1Q9ULW3 272 aaKnown RBP17.45■□□□□ 0.38
COL3A1-203ENST00000450867 SIPA1L1O43166 1804 aa17.44■□□□□ 0.38
COL3A1-203ENST00000450867 UNCXA6NJT0 531 aa17.44■□□□□ 0.38
COL3A1-203ENST00000450867 ERC2O15083 957 aa17.44■□□□□ 0.38
COL3A1-203ENST00000450867 PLCG2P16885 1265 aa17.44■□□□□ 0.38
COL3A1-203ENST00000450867 HUNKP57058 714 aa17.44■□□□□ 0.38
COL3A1-203ENST00000450867 NBPF12Q5TAG4 269 aaPredicted RBP17.44■□□□□ 0.38
COL3A1-203ENST00000450867 JMYQ8N9B5 988 aa17.44■□□□□ 0.38
COL3A1-203ENST00000450867 EDC3Q96F86 508 aaKnown RBP17.44■□□□□ 0.38
COL3A1-203ENST00000450867 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
COL3A1-203ENST00000450867 ATRNL1Q5VV63 1379 aa17.43■□□□□ 0.38
COL3A1-203ENST00000450867 PCNTO95613 3336 aa17.43■□□□□ 0.38
COL3A1-203ENST00000450867 TCRBV5S4A2TA0A5A2 114 aa17.43■□□□□ 0.38
COL3A1-203ENST00000450867 GLRX3O76003 335 aaKnown RBP17.43■□□□□ 0.38
COL3A1-203ENST00000450867 BAG3O95817 575 aa17.43■□□□□ 0.38
COL3A1-203ENST00000450867 PDE6AP16499 860 aa17.43■□□□□ 0.38
COL3A1-203ENST00000450867 LDLRAD1Q5T700 205 aa17.43■□□□□ 0.38
COL3A1-203ENST00000450867 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
COL3A1-203ENST00000450867 CDAN1Q8IWY9 1227 aa17.43■□□□□ 0.38
COL3A1-203ENST00000450867 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
COL3A1-203ENST00000450867 BCL11AQ9H165 835 aa17.43■□□□□ 0.38
COL3A1-203ENST00000450867 NAV1Q8NEY1 1877 aa17.42■□□□□ 0.38
COL3A1-203ENST00000450867 CYP7A1P22680 504 aa17.42■□□□□ 0.38
COL3A1-203ENST00000450867 RGS3P49796 1198 aa17.42■□□□□ 0.38
COL3A1-203ENST00000450867 PDE1AP54750 535 aa17.42■□□□□ 0.38
COL3A1-203ENST00000450867 TSHZ3Q63HK5 1081 aa17.42■□□□□ 0.38
COL3A1-203ENST00000450867 HOOK2Q96ED9 719 aa17.42■□□□□ 0.38
COL3A1-203ENST00000450867 NOL10Q9BSC4 688 aaKnown RBP17.42■□□□□ 0.38
COL3A1-203ENST00000450867 DDX4Q9NQI0 724 aaKnown RBP17.42■□□□□ 0.38
COL3A1-203ENST00000450867 MKRN1Q9UHC7 482 aaKnown RBP17.42■□□□□ 0.38
COL3A1-203ENST00000450867 PPP1R12BO60237 982 aaPredicted RBP17.41■□□□□ 0.38
COL3A1-203ENST00000450867 CENPBP07199 599 aaPredicted RBP17.41■□□□□ 0.38
COL3A1-203ENST00000450867 ADD2P35612 726 aa17.41■□□□□ 0.38
COL3A1-203ENST00000450867 VEGFBP49765 207 aa17.41■□□□□ 0.38
COL3A1-203ENST00000450867 SLC9C2Q5TAH2 1124 aa17.41■□□□□ 0.38
COL3A1-203ENST00000450867 ARMC9Q7Z3E5 817 aa17.41■□□□□ 0.38
COL3A1-203ENST00000450867 KBTBD3Q8NAB2 608 aa17.41■□□□□ 0.38
COL3A1-203ENST00000450867 LNPKQ9C0E8 428 aa17.41■□□□□ 0.38
COL3A1-203ENST00000450867 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL3A1-203ENST00000450867 OSBPL3Q9H4L5 887 aa17.41■□□□□ 0.38
COL3A1-203ENST00000450867 AATFQ9NY61 560 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL3A1-203ENST00000450867 USP2O75604 605 aaPredicted RBP17.4■□□□□ 0.38
COL3A1-203ENST00000450867 ECE1P42892 770 aa17.4■□□□□ 0.38
COL3A1-203ENST00000450867 MAP3K10Q02779 954 aa17.4■□□□□ 0.38
COL3A1-203ENST00000450867 UBE3CQ15386 1083 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms