RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
SMPD4-211ENST00000449159 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
SMPD4-211ENST00000449159 HHIPL2Q6UWX4 724 aa12.94□□□□□ -0.34
SMPD4-211ENST00000449159 DLK2Q6UY11 383 aa12.94□□□□□ -0.34
SMPD4-211ENST00000449159 ADGRA1Q86SQ6 560 aa12.94□□□□□ -0.34
SMPD4-211ENST00000449159 CCDC136Q96JN2 1154 aa12.94□□□□□ -0.34
SMPD4-211ENST00000449159 CAPNS2Q96L46 248 aa12.94□□□□□ -0.34
SMPD4-211ENST00000449159 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
SMPD4-211ENST00000449159 BEGAINQ9BUH8 593 aa12.94□□□□□ -0.34
SMPD4-211ENST00000449159 PAG1Q9NWQ8 432 aa12.94□□□□□ -0.34
SMPD4-211ENST00000449159 STAP2Q9UGK3 403 aa12.94□□□□□ -0.34
SMPD4-211ENST00000449159 PGAP2Q9UHJ9 254 aa12.94□□□□□ -0.34
SMPD4-211ENST00000449159 MROH7-TTC4A0A0A0MT08 1334 aa12.93□□□□□ -0.34
SMPD4-211ENST00000449159 GAKO14976 1311 aa12.93□□□□□ -0.34
SMPD4-211ENST00000449159 FOCADQ5VW36 1801 aa12.93□□□□□ -0.34
SMPD4-211ENST00000449159 ADM5C9JUS6 153 aa12.93□□□□□ -0.34
SMPD4-211ENST00000449159 FMR1Q06787 632 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMPD4-211ENST00000449159 CENPQQ7L2Z9 268 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-211ENST00000449159 SKAP1Q86WV1 359 aa12.93□□□□□ -0.34
SMPD4-211ENST00000449159 PLEKHM2Q8IWE5 1019 aa12.93□□□□□ -0.34
SMPD4-211ENST00000449159 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
SMPD4-211ENST00000449159 ABHD8Q96I13 439 aa12.93□□□□□ -0.34
SMPD4-211ENST00000449159 GLIS2Q9BZE0 524 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-211ENST00000449159 TDRD3Q9H7E2 651 aaKnown RBP12.93□□□□□ -0.34
SMPD4-211ENST00000449159 TRAF5O00463 557 aa12.92□□□□□ -0.34
SMPD4-211ENST00000449159 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
SMPD4-211ENST00000449159 CHGBP05060 677 aa12.92□□□□□ -0.34
SMPD4-211ENST00000449159 CACNB3P54284 484 aa12.92□□□□□ -0.34
SMPD4-211ENST00000449159 GRM1Q13255 1194 aa12.92□□□□□ -0.34
SMPD4-211ENST00000449159 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
SMPD4-211ENST00000449159 NAA16Q6N069 864 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-211ENST00000449159 USP48Q86UV5 1035 aa12.92□□□□□ -0.34
SMPD4-211ENST00000449159 MRIQ9BWK5 157 aa12.92□□□□□ -0.34
SMPD4-211ENST00000449159 TNRC18O15417 2968 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-211ENST00000449159 ERC2O15083 957 aa12.91□□□□□ -0.34
SMPD4-211ENST00000449159 BTDP43251 543 aa12.91□□□□□ -0.34
SMPD4-211ENST00000449159 TTF1Q15361 905 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-211ENST00000449159 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
SMPD4-211ENST00000449159 CYP4F22Q6NT55 531 aa12.91□□□□□ -0.34
SMPD4-211ENST00000449159 KRT26Q7Z3Y9 468 aa12.91□□□□□ -0.34
SMPD4-211ENST00000449159 MAGEB6Q8N7X4 407 aa12.91□□□□□ -0.34
SMPD4-211ENST00000449159 DCPSQ96C86 337 aaKnown RBP12.91□□□□□ -0.34
SMPD4-211ENST00000449159 VEZTQ9HBM0 779 aa12.91□□□□□ -0.34
SMPD4-211ENST00000449159 ZNF70Q9UC06 446 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-211ENST00000449159 TLL2Q9Y6L7 1015 aa12.91□□□□□ -0.34
SMPD4-211ENST00000449159 CASP8AP2Q9UKL3 1982 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 PITPNM2Q9BZ72 1349 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 MYO1BO43795 1136 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 PDE6AP16499 860 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 GSTO1P78417 241 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 CDC42EP5Q6NZY7 148 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-211ENST00000449159 OSBPL3Q9H4L5 887 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 PPP4R2Q9NY27 417 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 RFX7Q2KHR2 1363 aa12.9□□□□□ -0.34
SMPD4-211ENST00000449159 GPR75-ASB3A0A0A6YYF3 556 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 TCRBV5S4A2TA0A5A2 114 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 TCP10L2B9ZVM9 353 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 CYP7A1P22680 504 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 NFIAQ12857 509 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 SLC9C2Q5TAH2 1124 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 PRAMEF18Q5VWM3 479 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 CST9Q5W186 159 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 APOBEC3FQ8IUX4 373 aaKnown RBP12.89□□□□□ -0.35
SMPD4-211ENST00000449159 SULF1Q8IWU6 871 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 KBTBD3Q8NAB2 608 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 USP40Q9NVE5 1235 aa12.89□□□□□ -0.35
SMPD4-211ENST00000449159 ZNF532Q9HCE3 1301 aa12.88□□□□□ -0.35
SMPD4-211ENST00000449159 CA12O43570 354 aa12.88□□□□□ -0.35
SMPD4-211ENST00000449159 LDHCP07864 332 aa12.88□□□□□ -0.35
SMPD4-211ENST00000449159 ADD2P35612 726 aa12.88□□□□□ -0.35
SMPD4-211ENST00000449159 RHBDL3P58872 404 aa12.88□□□□□ -0.35
SMPD4-211ENST00000449159 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
SMPD4-211ENST00000449159 CDC37L1Q7L3B6 337 aa12.88□□□□□ -0.35
SMPD4-211ENST00000449159 MIGA1Q8NAN2 632 aa12.88□□□□□ -0.35
SMPD4-211ENST00000449159 SH3RF3Q8TEJ3 882 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-211ENST00000449159 CDCA5Q96FF9 252 aa12.88□□□□□ -0.35
SMPD4-211ENST00000449159 AATFQ9NY61 560 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMPD4-211ENST00000449159 NAV1Q8NEY1 1877 aa12.88□□□□□ -0.35
SMPD4-211ENST00000449159 MYH1P12882 1939 aa12.88□□□□□ -0.35
SMPD4-211ENST00000449159 DDX60LQ5H9U9 1706 aaKnown RBP12.88□□□□□ -0.35
SMPD4-211ENST00000449159 SSC5DA1L4H1 1573 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-211ENST00000449159 CELF2O95319 508 aaKnown RBP12.87□□□□□ -0.35
SMPD4-211ENST00000449159 MAP2K2P36507 400 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 RASA3Q14644 834 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 SAPCD2Q86UD0 394 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 HHIPL1Q96JK4 782 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 FSD1Q9BTV5 496 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.87□□□□□ -0.352e-8■■■■■ 26.9
SMPD4-211ENST00000449159 TMEM39BQ9GZU3 492 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 DEFB129Q9H1M3 183 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 ZNF408Q9H9D4 720 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 FAM198AQ9UFP1 575 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 SIPA1L1O43166 1804 aa12.87□□□□□ -0.35
SMPD4-211ENST00000449159 BAZ2AQ9UIF9 1905 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms