RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 FAM217BQ9NTX9 383 aaPredicted RBP15.82■□□□□ 0.12
POLR1B-209ENST00000448770 TNS3Q68CZ2 1445 aa15.81■□□□□ 0.12
POLR1B-209ENST00000448770 ZMYM6O95789 1325 aa15.81■□□□□ 0.12
POLR1B-209ENST00000448770 STRCQ7RTU9 1775 aa15.81■□□□□ 0.12
POLR1B-209ENST00000448770 PSDA5PKW4 1024 aaPredicted RBP15.81■□□□□ 0.12
POLR1B-209ENST00000448770 SH2B2O14492 632 aaPredicted RBP15.81■□□□□ 0.12
POLR1B-209ENST00000448770 H2AFXP16104 143 aaPredicted RBP15.81■□□□□ 0.12
POLR1B-209ENST00000448770 SYKP43405 635 aa15.81■□□□□ 0.12
POLR1B-209ENST00000448770 TNS2Q63HR2 1409 aa15.81■□□□□ 0.12
POLR1B-209ENST00000448770 ZFYP08048 801 aaPredicted RBP15.8■□□□□ 0.12
POLR1B-209ENST00000448770 NTRK3Q16288 839 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 TRIM65Q6PJ69 517 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 SHANK3Q9BYB0 1731 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 B4E1Z4 1266 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 IKBKBO14920 756 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 DHX16O60231 1041 aaKnown RBP15.8■□□□□ 0.12
POLR1B-209ENST00000448770 ADD2P35612 726 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 GRIN1Q05586 938 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 TCIRG1Q13488 830 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 LONRF3Q496Y0 759 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 HSP90AA4PQ58FG1 418 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 SPECC1Q5M775 1068 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 APOA5Q6Q788 366 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 MICU3Q86XE3 530 aa15.8■□□□□ 0.12
POLR1B-209ENST00000448770 ZRSR1Q15695 479 aaKnown RBP15.79■□□□□ 0.12
POLR1B-209ENST00000448770 TMEM139Q8IV31 216 aa15.79■□□□□ 0.12
POLR1B-209ENST00000448770 ANGEL1Q9UNK9 670 aaKnown RBP15.79■□□□□ 0.12
POLR1B-209ENST00000448770 KCNJ6P48051 423 aa15.79■□□□□ 0.12
POLR1B-209ENST00000448770 METAP2P50579 478 aaKnown RBP eCLIP15.79■□□□□ 0.12
POLR1B-209ENST00000448770 GABPB1Q06547 395 aaPredicted RBP15.79■□□□□ 0.12
POLR1B-209ENST00000448770 KRT222Q8N1A0 295 aa15.79■□□□□ 0.12
POLR1B-209ENST00000448770 ZCRB1Q8TBF4 217 aaKnown RBP15.79■□□□□ 0.12
POLR1B-209ENST00000448770 TMX1Q9H3N1 280 aa15.79■□□□□ 0.12
POLR1B-209ENST00000448770 RIPOR2Q9Y4F9 1068 aa15.79■□□□□ 0.12
POLR1B-209ENST00000448770 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.79■□□□□ 0.12
POLR1B-209ENST00000448770 TOGARAM1Q9Y4F4 1720 aa15.79■□□□□ 0.12
POLR1B-209ENST00000448770 CSF1RP07333 972 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 TERF2Q15554 542 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 RESP18Q5W5W9 173 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 REXO1L1PQ8IX06 675 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 WWC3Q9ULE0 1092 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 UBN2Q6ZU65 1347 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 PCDH11XQ9BZA7 1347 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 PCDH11YQ9BZA8 1340 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 PLEKHG2Q9H7P9 1386 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 FAM237AA0A1B0GTK4 181 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 CLCN6P51797 869 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 ZNF771Q7L3S4 317 aaPredicted RBP15.78■□□□□ 0.12
POLR1B-209ENST00000448770 TIGD1Q96MW7 591 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 GREM2Q9H772 168 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 FANCLQ9NW38 375 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 DNAI1Q9UI46 699 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 AKAP2Q9Y2D5 859 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 WDR19Q8NEZ3 1342 aa15.78■□□□□ 0.12
POLR1B-209ENST00000448770 KIF2AO00139 706 aaPredicted RBP15.77■□□□□ 0.12
POLR1B-209ENST00000448770 GUCY1A2P33402 732 aa15.77■□□□□ 0.12
POLR1B-209ENST00000448770 UBASH3AP57075 661 aa15.77■□□□□ 0.12
POLR1B-209ENST00000448770 MYL5Q02045 173 aa15.77■□□□□ 0.12
POLR1B-209ENST00000448770 SLC9C2Q5TAH2 1124 aa15.77■□□□□ 0.12
POLR1B-209ENST00000448770 IGDCC4Q8TDY8 1250 aa15.77■□□□□ 0.12
POLR1B-209ENST00000448770 SPATA31A3Q5VYP0 1347 aa15.77■□□□□ 0.12
POLR1B-209ENST00000448770 PPP6R2O75170 966 aa15.77■□□□□ 0.11
POLR1B-209ENST00000448770 HSPA2P54652 639 aa15.77■□□□□ 0.11
POLR1B-209ENST00000448770 ETF1P62495 437 aaKnown RBP15.77■□□□□ 0.11
POLR1B-209ENST00000448770 HLFQ16534 295 aa15.77■□□□□ 0.11
POLR1B-209ENST00000448770 VSTM4Q8IW00 320 aa15.77■□□□□ 0.11
POLR1B-209ENST00000448770 VGLL2Q8N8G2 317 aa15.77■□□□□ 0.11
POLR1B-209ENST00000448770 EPC1Q9H2F5 836 aa15.77■□□□□ 0.11
POLR1B-209ENST00000448770 LY9Q9HBG7 655 aa15.77■□□□□ 0.11
POLR1B-209ENST00000448770 EPB41L4AQ9HCS5 686 aaPredicted RBP15.77■□□□□ 0.11
POLR1B-209ENST00000448770 PCDHA5Q9Y5H7 936 aa15.77■□□□□ 0.11
POLR1B-209ENST00000448770 FHOD1Q9Y613 1164 aa15.77■□□□□ 0.11
POLR1B-209ENST00000448770 ATRNO75882 1429 aa15.77■□□□□ 0.11
POLR1B-209ENST00000448770 ERVV-2B6SEH9 535 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 PCCAP05165 728 aaPredicted RBP15.76■□□□□ 0.11
POLR1B-209ENST00000448770 PRR29P0C7W0 189 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 STK11IPQ8N1F8 1099 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 CHMP4CQ96CF2 233 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 MED15Q96RN5 788 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 ZNF532Q9HCE3 1301 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 SEC31BQ9NQW1 1179 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 ATF3P18847 181 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 GPTP24298 496 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 PHKA1P46020 1223 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 FMR1Q06787 632 aaKnown RBP eCLIP15.76■□□□□ 0.112e-7■■■■■ 26.8
POLR1B-209ENST00000448770 IFIT5Q13325 482 aaKnown RBP15.76■□□□□ 0.11
POLR1B-209ENST00000448770 TAF7LQ5H9L4 462 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 METTL24Q5JXM2 366 aa15.76■□□□□ 0.11
POLR1B-209ENST00000448770 UTP14AQ9BVJ6 771 aaKnown RBP15.76■□□□□ 0.11
POLR1B-209ENST00000448770 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.76■□□□□ 0.11
POLR1B-209ENST00000448770 TCRBV5S4A2TA0A5A2 114 aa15.75■□□□□ 0.11
POLR1B-209ENST00000448770 VWA3AA6NCI4 1184 aa15.75■□□□□ 0.11
POLR1B-209ENST00000448770 IDH1O75874 414 aaKnown RBP15.75■□□□□ 0.11
POLR1B-209ENST00000448770 TOB1P50616 345 aaPredicted RBP15.75■□□□□ 0.11
POLR1B-209ENST00000448770 MDM2Q00987 491 aaPredicted RBP15.75■□□□□ 0.11
POLR1B-209ENST00000448770 ZNF827Q17R98 1081 aa15.75■□□□□ 0.11
POLR1B-209ENST00000448770 CFAP100Q494V2 611 aa15.75■□□□□ 0.11
POLR1B-209ENST00000448770 ARHGAP29Q52LW3 1261 aa15.75■□□□□ 0.11
POLR1B-209ENST00000448770 DNAJC10Q8IXB1 793 aa15.75■□□□□ 0.11
POLR1B-209ENST00000448770 PLA2G12BQ9BX93 195 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms