RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 HOMER1Q86YM7 354 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 MNS1Q8NEH6 495 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 PLBD2Q8NHP8 589 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 UBXN4Q92575 508 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 ZNF274Q96GC6 653 aaPredicted RBP9.74□□□□□ -0.85
CPSF7-206ENST00000448745 DSCC1Q9BVC3 393 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 AGXT2Q9BYV1 514 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 XPO4Q9C0E2 1151 aaKnown RBP9.74□□□□□ -0.85
CPSF7-206ENST00000448745 COPRSQ9NQ92 184 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 HELLSQ9NRZ9 838 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 IFNKQ9P0W0 207 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 KIAA1468Q9P260 1216 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 TBC1D2BQ9UPU7 963 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 ANKRD36CQ5JPF3 1778 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 MAP3K15Q6ZN16 1313 aa9.74□□□□□ -0.85
CPSF7-206ENST00000448745 IKBKBO14920 756 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ZSCAN12O43309 604 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 MYCNP04198 464 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 PNMA6AP0CW24 399 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 CLCN6P51797 869 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ETF1P62495 437 aaKnown RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 SF3B2Q13435 895 aaKnown RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 HLFQ16534 295 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ERCC6LQ2NKX8 1250 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ARHGAP29Q52LW3 1261 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 TNNI3KQ59H18 835 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ARMCX5Q6P1M9 558 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 TXLNBQ8N3L3 684 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 HAUS7Q99871 368 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 SIL1Q9H173 461 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 DNAI1Q9UI46 699 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 FHOD1Q9Y613 1164 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 FPGT-TNNI3KV9GXZ4 949 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 CARMIL3Q8ND23 1372 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 GOLGA6L9A6NEM1 432 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ERICH4A6NGS2 130 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ERVV-1B6SEH8 477 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 CTDNEP1O95476 244 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 IGKV5-2P06315 115 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 SLC3A2P08195 630 aaKnown RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 FOSBP53539 338 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 EXOSC10Q01780 885 aaKnown RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 CCDC158Q5M9N0 1113 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 BRAPQ7Z569 592 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 DZIP3Q86Y13 1208 aaKnown RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 AK7Q96M32 723 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 DNAJC2Q99543 621 aaKnown RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 METTL22Q9BUU2 404 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ZBTB3Q9H5J0 574 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 TMEM51Q9NW97 253 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ORC3Q9UBD5 711 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 PCDHA7Q9UN72 937 aa9.73□□□□□ -0.85
CPSF7-206ENST00000448745 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-206ENST00000448745 PNPLA7Q6ZV29 1317 aa9.72□□□□□ -0.85
CPSF7-206ENST00000448745 EFCAB8A8MWE9 144 aa9.72□□□□□ -0.85
CPSF7-206ENST00000448745 ZRANB2O95218 330 aaKnown RBP eCLIP9.72□□□□□ -0.85
CPSF7-206ENST00000448745 ATXN8OSP0DMR3 200 aa9.72□□□□□ -0.85
CPSF7-206ENST00000448745 GTF2E1P29083 439 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-206ENST00000448745 APOBRQ0VD83 1088 aa9.72□□□□□ -0.85
CPSF7-206ENST00000448745 GPS2Q13227 327 aa9.72□□□□□ -0.85
CPSF7-206ENST00000448745 LRRFIP1Q32MZ4 808 aaKnown RBP9.72□□□□□ -0.85
CPSF7-206ENST00000448745 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
CPSF7-206ENST00000448745 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
CPSF7-206ENST00000448745 KBTBD3Q8NAB2 608 aa9.72□□□□□ -0.85
CPSF7-206ENST00000448745 FTOQ9C0B1 505 aaKnown RBP eCLIP9.72□□□□□ -0.85
CPSF7-206ENST00000448745 POLR3EQ9NVU0 708 aa9.72□□□□□ -0.85
CPSF7-206ENST00000448745 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-206ENST00000448745 NARFQ9UHQ1 456 aa9.72□□□□□ -0.85
CPSF7-206ENST00000448745 DBNLQ9UJU6 430 aaKnown RBP9.72□□□□□ -0.85
CPSF7-206ENST00000448745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-206ENST00000448745 NEURL1BA8MQ27 555 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 TULP2O00295 520 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 RGL2O15211 777 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 DHX16O60231 1041 aaKnown RBP9.71□□□□□ -0.85
CPSF7-206ENST00000448745 TADA3O75528 432 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 PLA2G4AP47712 749 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 IRX5P78411 483 aaPredicted RBP9.71□□□□□ -0.85
CPSF7-206ENST00000448745 FANCCQ00597 558 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 SLC15A2Q16348 729 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 DPCR1Q3MIW9 517 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 CCDC129Q6ZRS4 1044 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 STOX1Q6ZVD7 989 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 COL23A1Q86Y22 540 aaPredicted RBP9.71□□□□□ -0.85
CPSF7-206ENST00000448745 FBXL16Q8N461 479 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 ISCA1Q9BUE6 129 aa9.71□□□□□ -0.85
CPSF7-206ENST00000448745 SRP68Q9UHB9 627 aaKnown RBP9.71□□□□□ -0.85
CPSF7-206ENST00000448745 SPTLC2O15270 562 aa9.7□□□□□ -0.86
CPSF7-206ENST00000448745 HMGB2P26583 209 aaKnown RBP9.7□□□□□ -0.86
CPSF7-206ENST00000448745 NDUFA8P51970 172 aa9.7□□□□□ -0.86
CPSF7-206ENST00000448745 TRIM28Q13263 835 aaKnown RBP9.7□□□□□ -0.86
CPSF7-206ENST00000448745 TCIRG1Q13488 830 aa9.7□□□□□ -0.86
CPSF7-206ENST00000448745 GCKRQ14397 625 aa9.7□□□□□ -0.86
CPSF7-206ENST00000448745 TRAPPC3LQ5T215 181 aa9.7□□□□□ -0.86
CPSF7-206ENST00000448745 ZNF34Q8IZ26 560 aa9.7□□□□□ -0.86
CPSF7-206ENST00000448745 LINC00301Q8NCQ3 95 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms