RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 RNF113AO15541 343 aaKnown RBP6.98□□□□□ -1.29
PROM1-201ENST00000447510 IRX3P78415 501 aaPredicted RBP6.98□□□□□ -1.29
PROM1-201ENST00000447510 PKP1Q13835 747 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 DLGAP5Q15398 846 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 HS1BP3Q53T59 392 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 STK11IPQ8N1F8 1099 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 ZNF710Q8N1W2 664 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 KBTBD3Q8NAB2 608 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 SCN7AQ01118 1682 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 C4AP0C0L4 1744 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 FGFR2P21802 821 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 KCNA3P22001 575 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 TDO2P48775 406 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.98□□□□□ -1.29
PROM1-201ENST00000447510 AOX1Q06278 1338 aa6.98□□□□□ -1.29
PROM1-201ENST00000447510 MED23Q9ULK4 1368 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 RGPD3A6NKT7 1758 aaPredicted RBP6.97□□□□□ -1.29
PROM1-201ENST00000447510 RGPD4Q7Z3J3 1758 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 RIC1Q4ADV7 1423 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 MAGEB6P1A0A0J9YX57 407 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 CCDC66A2RUB6 948 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 SCARF1Q14162 830 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 EAPPQ56P03 285 aaPredicted RBP6.97□□□□□ -1.29
PROM1-201ENST00000447510 TEKT1Q969V4 418 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 STAP2Q9UGK3 403 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 PICALMQ13492 652 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 DRC7Q8IY82 874 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 VGLL2Q8N8G2 317 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 ZBTB12Q9Y330 459 aaPredicted RBP6.97□□□□□ -1.29
PROM1-201ENST00000447510 MCM5P33992 734 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 NUCB2P80303 420 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 TDRD7Q8NHU6 1098 aaKnown RBP6.97□□□□□ -1.29
PROM1-201ENST00000447510 MXD3Q9BW11 206 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 CRNKL1Q9BZJ0 848 aaKnown RBP6.97□□□□□ -1.29
PROM1-201ENST00000447510 TSPY26PQ9H489 355 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 GDPD2Q9HCC8 539 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 ZNF532Q9HCE3 1301 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 ZNF609O15014 1411 aa6.97□□□□□ -1.29
PROM1-201ENST00000447510 PSMD14O00487 310 aa6.96□□□□□ -1.29
PROM1-201ENST00000447510 POLR3DP05423 398 aaPredicted RBP6.96□□□□□ -1.29
PROM1-201ENST00000447510 USP17L8P0C7I0 530 aa6.96□□□□□ -1.29
PROM1-201ENST00000447510 PRDX5P30044 214 aa6.96□□□□□ -1.29
PROM1-201ENST00000447510 IRX5P78411 483 aaPredicted RBP6.96□□□□□ -1.29
PROM1-201ENST00000447510 NMIQ13287 307 aaPredicted RBP6.96□□□□□ -1.29
PROM1-201ENST00000447510 SLC4A8Q2Y0W8 1093 aa6.96□□□□□ -1.29
PROM1-201ENST00000447510 STRIP1Q5VSL9 837 aa6.96□□□□□ -1.29
PROM1-201ENST00000447510 PRIMPOLQ96LW4 560 aa6.96□□□□□ -1.29
PROM1-201ENST00000447510 PIH1D3Q9NQM4 214 aaKnown RBP6.96□□□□□ -1.29
PROM1-201ENST00000447510 AATFQ9NY61 560 aaKnown RBP eCLIP6.96□□□□□ -1.29
PROM1-201ENST00000447510 MINDY4BA8MYZ0 360 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 MBD4O95243 580 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 CYP2E1P05181 493 aaPredicted RBP6.96□□□□□ -1.3
PROM1-201ENST00000447510 PDE6AP16499 860 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 PLCG2P16885 1265 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 ARID4AP29374 1257 aaPredicted RBP6.96□□□□□ -1.3
PROM1-201ENST00000447510 DIXDC1Q155Q3 683 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 NAPBQ9H115 298 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 SLC4A4Q9Y6R1 1079 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 RREB1Q92766 1687 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 NFKBIEO00221 500 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 ZKSCAN1P17029 563 aaPredicted RBP6.96□□□□□ -1.3
PROM1-201ENST00000447510 ZNF445P59923 1031 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 CXCL9Q07325 125 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 MCMDC2Q4G0Z9 681 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 RNF20Q5VTR2 975 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 TEX11Q8IYF3 940 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 PI4K2BQ8TCG2 481 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 CHMP4CQ96CF2 233 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 TMX1Q9H3N1 280 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 TMEM63CQ9P1W3 806 aa6.96□□□□□ -1.3
PROM1-201ENST00000447510 RIOK3O14730 519 aaKnown RBP6.95□□□□□ -1.3
PROM1-201ENST00000447510 YBX3P16989 372 aaKnown RBP eCLIP6.95□□□□□ -1.3
PROM1-201ENST00000447510 TRDNQ13061 729 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 LRSAM1Q6UWE0 723 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 CRACR2BQ8N4Y2 399 aaPredicted RBP6.95□□□□□ -1.3
PROM1-201ENST00000447510 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.95□□□□□ -1.3
PROM1-201ENST00000447510 TIGD1Q96MW7 591 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 OSBPL3Q9H4L5 887 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 ARMT1Q9H993 441 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 KCNQ5Q9NR82 932 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 USP40Q9NVE5 1235 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 MYO3BQ8WXR4 1341 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 ANKRD36CQ5JPF3 1778 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 SLC3A2P08195 630 aaKnown RBP6.95□□□□□ -1.3
PROM1-201ENST00000447510 GSPT1P15170 499 aaKnown RBP6.95□□□□□ -1.3
PROM1-201ENST00000447510 MECOMQ03112 1051 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 RRP12Q5JTH9 1297 aaKnown RBP6.95□□□□□ -1.3
PROM1-201ENST00000447510 C7orf43Q8WVR3 580 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 APPBP2Q92624 585 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 VPS33BQ9H267 617 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 GMPSP49915 693 aaPredicted RBP6.95□□□□□ -1.3
PROM1-201ENST00000447510 TTLL12Q14166 644 aaPredicted RBP6.95□□□□□ -1.3
PROM1-201ENST00000447510 TBC1D10BQ4KMP7 808 aaPredicted RBP6.95□□□□□ -1.3
PROM1-201ENST00000447510 RSBN1LQ6PCB5 846 aaPredicted RBP6.95□□□□□ -1.3
PROM1-201ENST00000447510 FAM227BQ96M60 508 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 LMBRD1Q9NUN5 540 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.95□□□□□ -1.3
PROM1-201ENST00000447510 CTNNA3Q9UI47 895 aa6.95□□□□□ -1.3
PROM1-201ENST00000447510 V9GYY5 206 aaPredicted RBP6.95□□□□□ -1.3
PROM1-201ENST00000447510 CLRN2A0PK11 232 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms