RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■■■■□ 26.5
BRF1-206ENST00000446501 KCNQ4P56696 695 aa18.85■□□□□ 0.61
BRF1-206ENST00000446501 SMIM5Q71RC9 77 aa18.85■□□□□ 0.61
BRF1-206ENST00000446501 DISP2A7MBM2 1401 aa18.84■□□□□ 0.61
BRF1-206ENST00000446501 NEMFO60524 1076 aa18.84■□□□□ 0.61
BRF1-206ENST00000446501 PDE6AP16499 860 aa18.84■□□□□ 0.61
BRF1-206ENST00000446501 CDC25BP30305 580 aa18.84■□□□□ 0.61
BRF1-206ENST00000446501 ATP6V1AP38606 617 aa18.84■□□□□ 0.61
BRF1-206ENST00000446501 RBM43Q6ZSC3 357 aaKnown RBP18.84■□□□□ 0.61
BRF1-206ENST00000446501 CYB5R4Q7L1T6 521 aa18.84■□□□□ 0.61
BRF1-206ENST00000446501 ORC3Q9UBD5 711 aaPredicted RBP18.84■□□□□ 0.61
BRF1-206ENST00000446501 IQSEC3Q9UPP2 1182 aaPredicted RBP18.84■□□□□ 0.61
BRF1-206ENST00000446501 FHOD1Q9Y613 1164 aa18.84■□□□□ 0.61
BRF1-206ENST00000446501 ZNF34Q8IZ26 560 aa18.84■□□□□ 0.61
BRF1-206ENST00000446501 MRFAP1L1Q96HT8 127 aa18.84■□□□□ 0.61
BRF1-206ENST00000446501 RCOR1Q9UKL0 485 aa18.84■□□□□ 0.61
BRF1-206ENST00000446501 WTIPA6NIX2 430 aaPredicted RBP18.83■□□□□ 0.61
BRF1-206ENST00000446501 B4E1Z4 1266 aa18.83■□□□□ 0.61
BRF1-206ENST00000446501 CPLX1O14810 134 aa18.83■□□□□ 0.61
BRF1-206ENST00000446501 IL6STP40189 918 aaPredicted RBP18.83■□□□□ 0.61
BRF1-206ENST00000446501 MYL10Q9BUA6 226 aa18.83■□□□□ 0.61
BRF1-206ENST00000446501 NUTM2BA6NNL0 878 aaPredicted RBP18.83■□□□□ 0.6
BRF1-206ENST00000446501 NUTM2EB1AL46 878 aaPredicted RBP18.83■□□□□ 0.6
BRF1-206ENST00000446501 INTS5Q6P9B9 1019 aaKnown RBP18.83■□□□□ 0.6
BRF1-206ENST00000446501 NUTM2AQ8IVF1 878 aaPredicted RBP18.83■□□□□ 0.6
BRF1-206ENST00000446501 ITGB4P16144 1822 aa18.83■□□□□ 0.6
BRF1-206ENST00000446501 NWD2Q9ULI1 1742 aa18.83■□□□□ 0.6
BRF1-206ENST00000446501 TULP2O00295 520 aa18.83■□□□□ 0.6
BRF1-206ENST00000446501 PNMA6AP0CW24 399 aaPredicted RBP18.83■□□□□ 0.6
BRF1-206ENST00000446501 CRKLP46109 303 aaKnown RBP18.83■□□□□ 0.6
BRF1-206ENST00000446501 AOPEPQ8N6M6 819 aa18.83■□□□□ 0.6
BRF1-206ENST00000446501 CLIC4Q9Y696 253 aa18.83■□□□□ 0.6
BRF1-206ENST00000446501 UBE2Q2LH0YL09 131 aa18.82■□□□□ 0.6
BRF1-206ENST00000446501 RASGRF1Q13972 1273 aa18.82■□□□□ 0.6
BRF1-206ENST00000446501 HOMER1Q86YM7 354 aa18.82■□□□□ 0.6
BRF1-206ENST00000446501 C8orf76Q96K31 380 aa18.82■□□□□ 0.6
BRF1-206ENST00000446501 SLIT2O94813 1529 aa18.82■□□□□ 0.6
BRF1-206ENST00000446501 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.82■□□□□ 0.6
BRF1-206ENST00000446501 ITPK1Q13572 414 aa18.82■□□□□ 0.6
BRF1-206ENST00000446501 MAGEB6Q8N7X4 407 aa18.82■□□□□ 0.6
BRF1-206ENST00000446501 MPHOSPH8Q99549 860 aa18.82■□□□□ 0.6
BRF1-206ENST00000446501 A0A1B0GVL5 298 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 BCAMP50895 628 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 EIF5P55010 431 aaKnown RBP18.81■□□□□ 0.6
BRF1-206ENST00000446501 RAD51AP2Q09MP3 1159 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 PUM3Q15397 648 aaKnown RBP18.81■□□□□ 0.6
BRF1-206ENST00000446501 FSIP1Q8NA03 581 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 AIDAQ96BJ3 306 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 KIF28PB7ZC32 967 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 H2AFXP16104 143 aaPredicted RBP18.81■□□□□ 0.6
BRF1-206ENST00000446501 PLA2G4AP47712 749 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 CTDSPL2Q05D32 466 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 TRDNQ13061 729 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 DDB1Q16531 1140 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 STX1AQ16623 288 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 MICU3Q86XE3 530 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 PHKBQ93100 1093 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 ARMT1Q9H993 441 aa18.81■□□□□ 0.6
BRF1-206ENST00000446501 ERVV-1B6SEH8 477 aa18.8■□□□□ 0.6
BRF1-206ENST00000446501 KCNQ2O43526 872 aa18.8■□□□□ 0.6
BRF1-206ENST00000446501 PRKAB2O43741 272 aa18.8■□□□□ 0.6
BRF1-206ENST00000446501 EVCP57679 992 aa18.8■□□□□ 0.6
BRF1-206ENST00000446501 SARM1Q6SZW1 724 aa18.8■□□□□ 0.6
BRF1-206ENST00000446501 LPIN2Q92539 896 aa18.8■□□□□ 0.6
BRF1-206ENST00000446501 PCDHA7Q9UN72 937 aa18.8■□□□□ 0.6
BRF1-206ENST00000446501 NEDD4P46934 1319 aa18.8■□□□□ 0.6
BRF1-206ENST00000446501 SEC31AO94979 1220 aaKnown RBP18.8■□□□□ 0.6
BRF1-206ENST00000446501 TNNT3P45378 269 aaPredicted RBP18.8■□□□□ 0.6
BRF1-206ENST00000446501 SPATA5Q8NB90 893 aa18.8■□□□□ 0.6
BRF1-206ENST00000446501 ZBTB9Q96C00 473 aa18.8■□□□□ 0.6
BRF1-206ENST00000446501 ZCCHC17Q9NP64 241 aaKnown RBP18.8■□□□□ 0.6
BRF1-206ENST00000446501 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.8■□□□□ 0.6
BRF1-206ENST00000446501 MBD4O95243 580 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 SMC2O95347 1197 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 TICAM2Q86XR7 235 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 MARCH10Q8NA82 808 aaPredicted RBP18.79■□□□□ 0.6
BRF1-206ENST00000446501 ZNF396Q96N95 335 aaPredicted RBP18.79■□□□□ 0.6
BRF1-206ENST00000446501 CCDC87Q9NVE4 849 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 FEZ2Q9UHY8 353 aaPredicted RBP18.79■□□□□ 0.6
BRF1-206ENST00000446501 NIP7Q9Y221 180 aaKnown RBP eCLIP18.79■□□□□ 0.6
BRF1-206ENST00000446501 LRP6O75581 1613 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 TCRBV5S4A2TA0A5A2 114 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 FGFR2P21802 821 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 E4F1Q66K89 784 aaPredicted RBP18.79■□□□□ 0.6
BRF1-206ENST00000446501 CCDC73Q6ZRK6 1079 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 ZFP91Q96JP5 570 aaPredicted RBP18.79■□□□□ 0.6
BRF1-206ENST00000446501 STRBPQ96SI9 672 aaKnown RBP18.79■□□□□ 0.6
BRF1-206ENST00000446501 NHSL1Q5SYE7 1610 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 LOC102724428A0A0B4J2F2 783 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 SIK1P57059 783 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 TTF1Q15361 905 aaPredicted RBP18.79■□□□□ 0.6
BRF1-206ENST00000446501 TEX35Q5T0J7 233 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 TMCO3Q6UWJ1 677 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 DHX40Q8IX18 779 aaKnown RBP18.79■□□□□ 0.6
BRF1-206ENST00000446501 MIGA1Q8NAN2 632 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 FBXO18Q8NFZ0 1043 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 PPP1R13BQ96KQ4 1090 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 EPB41L4AQ9HCS5 686 aaPredicted RBP18.79■□□□□ 0.6
BRF1-206ENST00000446501 TACC3Q9Y6A5 838 aa18.79■□□□□ 0.6
BRF1-206ENST00000446501 ARID4AP29374 1257 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms