RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TRIM37O94972 964 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 GARTP22102 1010 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 NOS3P29474 1203 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 MAP3K11Q16584 847 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 LLGL2Q6P1M3 1020 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 MPRIPQ6WCQ1 1025 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 AGGF1Q8N302 714 aaeCLIP7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 TMEM74Q96NL1 305 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 RUSC1Q9BVN2 902 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 RNF208Q9H0X6 261 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 AKTIPQ9H8T0 292 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 GGT7Q9UJ14 662 aa7.23□□□□□ -1.25
HMGB1P48-201ENST00000446155 C1QTNF9BB2RNN3 333 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 ALX3O95076 343 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 TIAF1O95411 115 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 LMNB2Q03252 620 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 PTPN11Q06124 597 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 RAD51AP2Q09MP3 1159 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 PWP1Q13610 501 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 LRRC14Q15048 493 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 KIF4BQ2VIQ3 1234 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 EXOSC6Q5RKV6 272 aaKnown RBP7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 SMG8Q8ND04 991 aaKnown RBP7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 WFDC12Q8WWY7 111 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 WDR89Q96FK6 387 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 WDR18Q9BV38 432 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 SSBP4Q9BWG4 385 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 TLR6Q9Y2C9 796 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 PCDHB5Q9Y5E4 795 aa7.22□□□□□ -1.25
HMGB1P48-201ENST00000446155 GDF11O95390 407 aa7.21□□□□□ -1.26
HMGB1P48-201ENST00000446155 HP1BP3Q5SSJ5 553 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P48-201ENST00000446155 TMEM151AQ8N4L1 468 aa7.21□□□□□ -1.26
HMGB1P48-201ENST00000446155 GPBAR1Q8TDU6 330 aa7.21□□□□□ -1.26
HMGB1P48-201ENST00000446155 KCNB2Q92953 911 aa7.21□□□□□ -1.26
HMGB1P48-201ENST00000446155 ZC3H12CQ9C0D7 883 aaKnown RBP7.21□□□□□ -1.26
HMGB1P48-201ENST00000446155 DDX41Q9UJV9 622 aaKnown RBP7.21□□□□□ -1.26
HMGB1P48-201ENST00000446155 USP21Q9UK80 565 aa7.21□□□□□ -1.26
HMGB1P48-201ENST00000446155 F6X3S4 739 aa7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 AOC2O75106 756 aa7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 LIG1P18858 919 aa7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 RACK1P63244 317 aaKnown RBP7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 MAP1SQ66K74 1059 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 CCDC84Q86UT8 332 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 TXNRD3Q86VQ6 643 aa7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 NT5DC4Q86YG4 428 aa7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 RELL1Q8IUW5 271 aa7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 TRIM42Q8IWZ5 723 aa7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 DZIP1LQ8IYY4 767 aaKnown RBP7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 MEGF10Q96KG7 1140 aa7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 CBX8Q9HC52 389 aa7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 ADAMTS1Q9UHI8 967 aa7.2□□□□□ -1.26
HMGB1P48-201ENST00000446155 PF4P02776 101 aa7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 GBP2P32456 591 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 IREB2P48200 963 aaKnown RBP7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 CAMK2GQ13555 558 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 PDE3AQ14432 1141 aa7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 PLA2G4EQ3MJ16 856 aa7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 ZNF394Q53GI3 561 aa7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 C9orf131Q5VYM1 1079 aa7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 ANKRD34AQ69YU3 496 aa7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 FAM46AQ96IP4 442 aaKnown RBP7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 UBL7Q96S82 380 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 GSX1Q9H4S2 264 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P48-201ENST00000446155 FAM221AA4D161 298 aa7.18□□□□□ -1.26
HMGB1P48-201ENST00000446155 GREM1O60565 184 aa7.18□□□□□ -1.26
HMGB1P48-201ENST00000446155 ADH5P11766 374 aa7.18□□□□□ -1.26
HMGB1P48-201ENST00000446155 PREPP48147 710 aa7.18□□□□□ -1.26
HMGB1P48-201ENST00000446155 SEPT6Q14141 434 aa7.18□□□□□ -1.26
HMGB1P48-201ENST00000446155 USP48Q86UV5 1035 aa7.18□□□□□ -1.26
HMGB1P48-201ENST00000446155 PPP1R9AQ9ULJ8 1098 aa7.18□□□□□ -1.26
HMGB1P48-201ENST00000446155 PCDHGB7Q9Y5F8 929 aa7.18□□□□□ -1.26
HMGB1P48-201ENST00000446155 TMPRSS2O15393 492 aa7.17□□□□□ -1.26
HMGB1P48-201ENST00000446155 SOX4Q06945 474 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P48-201ENST00000446155 ZC3H12AQ5D1E8 599 aaKnown RBP7.17□□□□□ -1.26
HMGB1P48-201ENST00000446155 NUTM2GQ5VZR2 741 aa7.17□□□□□ -1.26
HMGB1P48-201ENST00000446155 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P48-201ENST00000446155 C2CD4AQ8NCU7 369 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P48-201ENST00000446155 MIR1-1HGQ9H1L0 117 aa7.17□□□□□ -1.26
HMGB1P48-201ENST00000446155 CYP4F12Q9HCS2 524 aa7.17□□□□□ -1.26
HMGB1P48-201ENST00000446155 CRIM1Q9NZV1 1036 aa7.17□□□□□ -1.26
HMGB1P48-201ENST00000446155 MINDY4BA8MYZ0 360 aa7.16□□□□□ -1.26
HMGB1P48-201ENST00000446155 CILPO75339 1184 aa7.16□□□□□ -1.26
HMGB1P48-201ENST00000446155 PROCP04070 461 aa7.16□□□□□ -1.26
HMGB1P48-201ENST00000446155 EIF4A3P38919 411 aaKnown RBP7.16□□□□□ -1.26
HMGB1P48-201ENST00000446155 RING1Q06587 406 aa7.16□□□□□ -1.26
HMGB1P48-201ENST00000446155 FBXL19Q6PCT2 694 aa7.16□□□□□ -1.26
HMGB1P48-201ENST00000446155 BNC2Q6ZN30 1099 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P48-201ENST00000446155 LRRC3Q9BY71 257 aa7.16□□□□□ -1.26
HMGB1P48-201ENST00000446155 CEP41Q9BYV8 373 aa7.16□□□□□ -1.26
HMGB1P48-201ENST00000446155 TGIF2Q9GZN2 237 aa7.16□□□□□ -1.26
HMGB1P48-201ENST00000446155 F13A1P00488 732 aa7.15□□□□□ -1.26
HMGB1P48-201ENST00000446155 DRD2P14416 443 aa7.15□□□□□ -1.26
HMGB1P48-201ENST00000446155 GLB1P16278 677 aa7.15□□□□□ -1.26
HMGB1P48-201ENST00000446155 CDK8P49336 464 aa7.15□□□□□ -1.26
HMGB1P48-201ENST00000446155 FAM160A1Q05DH4 1040 aa7.15□□□□□ -1.26
HMGB1P48-201ENST00000446155 AKAP4Q5JQC9 854 aa7.15□□□□□ -1.26
HMGB1P48-201ENST00000446155 FDX2Q6P4F2 183 aa7.15□□□□□ -1.26
HMGB1P48-201ENST00000446155 LRFN4Q6PJG9 635 aa7.15□□□□□ -1.26
HMGB1P48-201ENST00000446155 ARMC10Q8N2F6 343 aa7.15□□□□□ -1.26
HMGB1P48-201ENST00000446155 ZNF296Q8WUU4 475 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms