RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 MAP3K11Q16584 847 aa19.65■□□□□ 0.74
LAPTM4B-201ENST00000445593 CAVIN4Q5BKX8 364 aa19.65■□□□□ 0.74
LAPTM4B-201ENST00000445593 FAM196AQ6ZSG2 479 aa19.65■□□□□ 0.74
LAPTM4B-201ENST00000445593 ILDR1Q86SU0 546 aaPredicted RBP19.65■□□□□ 0.74
LAPTM4B-201ENST00000445593 ZSCAN16Q9H4T2 348 aaPredicted RBP19.65■□□□□ 0.74
LAPTM4B-201ENST00000445593 RFC4P35249 363 aa19.65■□□□□ 0.74
LAPTM4B-201ENST00000445593 EVX2Q03828 476 aa19.65■□□□□ 0.74
LAPTM4B-201ENST00000445593 NUP133Q8WUM0 1156 aa19.65■□□□□ 0.74
LAPTM4B-201ENST00000445593 CFAP45Q9UL16 551 aa19.65■□□□□ 0.74
LAPTM4B-201ENST00000445593 SALL1Q9NSC2 1324 aa19.64■□□□□ 0.73
LAPTM4B-201ENST00000445593 MFSD6Q6ZSS7 791 aa19.64■□□□□ 0.73
LAPTM4B-201ENST00000445593 SH2B2O14492 632 aaPredicted RBP19.64■□□□□ 0.73
LAPTM4B-201ENST00000445593 RPS8P62241 208 aaKnown RBP19.64■□□□□ 0.73
LAPTM4B-201ENST00000445593 TXNRD3Q86VQ6 643 aa19.64■□□□□ 0.73
LAPTM4B-201ENST00000445593 NARFQ9UHQ1 456 aa19.64■□□□□ 0.73
LAPTM4B-201ENST00000445593 GOLGA8AA7E2F4 631 aa19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 RPS6KA4O75676 772 aa19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 NAA16Q6N069 864 aaPredicted RBP19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 APOA5Q6Q788 366 aa19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 CCAR1Q8IX12 1150 aaKnown RBP19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 FAM84BQ96KN1 310 aaPredicted RBP19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 MYH7P12883 1935 aa19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 LUZP1Q86V48 1076 aa19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 GNL3LQ9NVN8 582 aaKnown RBP19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 KIF28PB7ZC32 967 aa19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 DHX16O60231 1041 aaKnown RBP19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 ADCY5O95622 1261 aa19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 GNL2Q13823 731 aaKnown RBP19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 SF3A1Q15459 793 aaKnown RBP19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 NACAP1Q9BZK3 213 aa19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 BSDC1Q9NW68 430 aaPredicted RBP19.63■□□□□ 0.73
LAPTM4B-201ENST00000445593 ELP1O95163 1332 aa19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 ZBTB43O43298 467 aa19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 CCDC192P0DO97 292 aa19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 ZSCAN30Q86W11 494 aa19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 FNBP4Q8N3X1 1017 aaPredicted RBP19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 GOLPH3LQ9H4A5 285 aa19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 CLIC4Q9Y696 253 aa19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 MAGEB6P1A0A0J9YX57 407 aa19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 RRP9O43818 475 aaKnown RBP19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 SPC24Q8NBT2 197 aa19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 PDLIM2Q96JY6 352 aa19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 ALG1Q9BT22 464 aa19.62■□□□□ 0.73
LAPTM4B-201ENST00000445593 CCDC69A6NI79 296 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 LETM1O95202 739 aaPredicted RBP19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 CLCN1P35523 988 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 TYRO3Q06418 890 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 AKNAD1Q5T1N1 836 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 TPTE2Q6XPS3 522 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 BBXQ8WY36 941 aaPredicted RBP19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 SLC26A6Q9BXS9 759 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 SLC12A7Q9Y666 1083 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 SF3B3Q15393 1217 aaKnown RBP19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 ANO6Q4KMQ2 910 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 TICAM2Q86XR7 235 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 ANKIB1Q9P2G1 1089 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 DDX60Q8IY21 1712 aaKnown RBP19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 AFF2P51816 1311 aa19.61■□□□□ 0.73
LAPTM4B-201ENST00000445593 PRDX5P30044 214 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 LY9Q9HBG7 655 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 AATFQ9NY61 560 aaKnown RBP eCLIP19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 CNTNAP4Q9C0A0 1308 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 A0A1B0GVL5 298 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 hCG_1642624A0A1W2PR95 340 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 MARCKSP29966 332 aaPredicted RBP19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 STK38Q15208 465 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 FSIP1Q8NA03 581 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 IGDCC4Q8TDY8 1250 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 GJD4Q96KN9 370 aaPredicted RBP19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 COL1A1P02452 1464 aaPredicted RBP19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 HSPA1LP34931 641 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 SEPT12Q8IYM1 358 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 FUCA2Q9BTY2 467 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 DNAJC25Q9H1X3 360 aa19.6■□□□□ 0.73
LAPTM4B-201ENST00000445593 AP5Z1O43299 807 aa19.59■□□□□ 0.73
LAPTM4B-201ENST00000445593 FBXO18Q8NFZ0 1043 aa19.59■□□□□ 0.73
LAPTM4B-201ENST00000445593 ZNF396Q96N95 335 aaPredicted RBP19.59■□□□□ 0.73
LAPTM4B-201ENST00000445593 LRRC4BQ9NT99 713 aa19.59■□□□□ 0.73
LAPTM4B-201ENST00000445593 TRAPPC3LQ5T215 181 aa19.59■□□□□ 0.73
LAPTM4B-201ENST00000445593 RANBP6O60518 1105 aaKnown RBP19.58■□□□□ 0.73
LAPTM4B-201ENST00000445593 MRVI1Q9Y6F6 885 aa19.58■□□□□ 0.73
LAPTM4B-201ENST00000445593 ATP2B1P20020 1258 aa19.58■□□□□ 0.73
LAPTM4B-201ENST00000445593 PPARAQ07869 468 aa19.58■□□□□ 0.73
LAPTM4B-201ENST00000445593 UBE4AQ14139 1066 aa19.58■□□□□ 0.73
LAPTM4B-201ENST00000445593 CCDC73Q6ZRK6 1079 aa19.58■□□□□ 0.73
LAPTM4B-201ENST00000445593 ZNF384Q8TF68 577 aa19.58■□□□□ 0.73
LAPTM4B-201ENST00000445593 ATRNO75882 1429 aa19.58■□□□□ 0.72
LAPTM4B-201ENST00000445593 EVCP57679 992 aa19.58■□□□□ 0.72
LAPTM4B-201ENST00000445593 PIBF1Q8WXW3 757 aa19.58■□□□□ 0.72
LAPTM4B-201ENST00000445593 NYXQ9GZU5 481 aa19.58■□□□□ 0.72
LAPTM4B-201ENST00000445593 ZMYM6O95789 1325 aa19.58■□□□□ 0.72
LAPTM4B-201ENST00000445593 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 GUCY1A2P33402 732 aa19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 IARSP41252 1262 aaKnown RBP19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 NFIXQ14938 502 aa19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 SASS6Q6UVJ0 657 aa19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 SYNE3Q6ZMZ3 975 aa19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 CLSTN2Q9H4D0 955 aa19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 ZHX1Q9UKY1 873 aaPredicted RBP19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 LRP5O75197 1615 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms