RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 APOBEC3HQ6NTF7 200 aaKnown RBP17.06■□□□□ 0.32
SSBP3-208ENST00000444533 PIAS4Q8N2W9 510 aaPredicted RBP17.06■□□□□ 0.32
SSBP3-208ENST00000444533 HOOK2Q96ED9 719 aa17.06■□□□□ 0.32
SSBP3-208ENST00000444533 DEFB129Q9H1M3 183 aa17.06■□□□□ 0.32
SSBP3-208ENST00000444533 ANTXR1Q9H6X2 564 aa17.06■□□□□ 0.32
SSBP3-208ENST00000444533 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
SSBP3-208ENST00000444533 PCDHAC2Q9Y5I4 1007 aa17.06■□□□□ 0.32
SSBP3-208ENST00000444533 GPR75-ASB3A0A0A6YYF3 556 aa17.05■□□□□ 0.32
SSBP3-208ENST00000444533 TCP10L2B9ZVM9 353 aa17.05■□□□□ 0.32
SSBP3-208ENST00000444533 ADM5C9JUS6 153 aa17.05■□□□□ 0.32
SSBP3-208ENST00000444533 ITGBL1O95965 494 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-208ENST00000444533 SUPT20HL1Q3ZLR7 823 aa17.05■□□□□ 0.32
SSBP3-208ENST00000444533 FKBP1CQ5VVH2 108 aa17.05■□□□□ 0.32
SSBP3-208ENST00000444533 OTUD7AQ8TE49 926 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-208ENST00000444533 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
SSBP3-208ENST00000444533 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
SSBP3-208ENST00000444533 ZFYP08048 801 aaPredicted RBP17.04■□□□□ 0.32
SSBP3-208ENST00000444533 APLP1P51693 650 aa17.04■□□□□ 0.32
SSBP3-208ENST00000444533 CDC42EP5Q6NZY7 148 aa17.04■□□□□ 0.32
SSBP3-208ENST00000444533 PI4K2BQ8TCG2 481 aa17.04■□□□□ 0.32
SSBP3-208ENST00000444533 FSD1Q9BTV5 496 aa17.04■□□□□ 0.32
SSBP3-208ENST00000444533 MYH2Q9UKX2 1941 aa17.04■□□□□ 0.32
SSBP3-208ENST00000444533 MAST2Q6P0Q8 1798 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 TMEM88BA6NKF7 163 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 TRAF5O00463 557 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 PDE6AP16499 860 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 HSPA6P17066 643 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 RASA3Q14644 834 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 FAM83AQ86UY5 434 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 C2orf69Q8N8R5 385 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 EVI5LQ96CN4 794 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 EDC3Q96F86 508 aaKnown RBP17.03■□□□□ 0.32
SSBP3-208ENST00000444533 CDCA5Q96FF9 252 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 AATFQ9NY61 560 aaKnown RBP eCLIP17.03■□□□□ 0.32
SSBP3-208ENST00000444533 ECM29Q5VYK3 1845 aa17.03■□□□□ 0.32
SSBP3-208ENST00000444533 PASKQ96RG2 1323 aa17.02■□□□□ 0.32
SSBP3-208ENST00000444533 SALL3Q9BXA9 1300 aa17.02■□□□□ 0.32
SSBP3-208ENST00000444533 MAGEB6P1A0A0J9YX57 407 aa17.02■□□□□ 0.32
SSBP3-208ENST00000444533 TTLL12Q14166 644 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-208ENST00000444533 PLEKHM2Q8IWE5 1019 aa17.02■□□□□ 0.32
SSBP3-208ENST00000444533 ZSCAN29Q8IWY8 852 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-208ENST00000444533 TEX11Q8IYF3 940 aa17.02■□□□□ 0.32
SSBP3-208ENST00000444533 OSBPL3Q9H4L5 887 aa17.02■□□□□ 0.32
SSBP3-208ENST00000444533 ABT1Q9ULW3 272 aaKnown RBP17.02■□□□□ 0.32
SSBP3-208ENST00000444533 ZNF532Q9HCE3 1301 aa17.01■□□□□ 0.31
SSBP3-208ENST00000444533 PPP1R12BO60237 982 aaPredicted RBP17.01■□□□□ 0.31
SSBP3-208ENST00000444533 CACNB3P54284 484 aa17.01■□□□□ 0.31
SSBP3-208ENST00000444533 UBE3CQ15386 1083 aa17.01■□□□□ 0.31
SSBP3-208ENST00000444533 RILPL2Q969X0 211 aa17.01■□□□□ 0.31
SSBP3-208ENST00000444533 DDRGK1Q96HY6 314 aa17.01■□□□□ 0.31
SSBP3-208ENST00000444533 CREBZFQ9NS37 354 aa17.01■□□□□ 0.31
SSBP3-208ENST00000444533 SCAF8Q9UPN6 1271 aaKnown RBP17.01■□□□□ 0.31
SSBP3-208ENST00000444533 ENTPD3O75355 529 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 ADD2P35612 726 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 USP5P45974 858 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 PPP4CP60510 307 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 FKBP1BP68106 108 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 TCP10Q12799 353 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 PICALMQ13492 652 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 ARMC9Q7Z3E5 817 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 TICAM2Q86XR7 235 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 MIGA1Q8NAN2 632 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 FAM151AQ8WW52 585 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 AIDAQ96BJ3 306 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 IDI2Q9BXS1 227 aa17■□□□□ 0.31
SSBP3-208ENST00000444533 CRNKL1Q9BZJ0 848 aaKnown RBP17■□□□□ 0.31
SSBP3-208ENST00000444533 RNF113AO15541 343 aaKnown RBP16.99■□□□□ 0.31
SSBP3-208ENST00000444533 ZNF384Q8TF68 577 aa16.99■□□□□ 0.31
SSBP3-208ENST00000444533 GBA2Q9HCG7 927 aaPredicted RBP16.99■□□□□ 0.31
SSBP3-208ENST00000444533 POLR2AP24928 1970 aaKnown RBP16.98■□□□□ 0.31
SSBP3-208ENST00000444533 DOCK2Q92608 1830 aa16.98■□□□□ 0.31
SSBP3-208ENST00000444533 RGS3P49796 1198 aa16.98■□□□□ 0.31
SSBP3-208ENST00000444533 PRAMEF18Q5VWM3 479 aa16.98■□□□□ 0.31
SSBP3-208ENST00000444533 DCAF15Q66K64 600 aa16.98■□□□□ 0.31
SSBP3-208ENST00000444533 SH3RF3Q8TEJ3 882 aaPredicted RBP16.98■□□□□ 0.31
SSBP3-208ENST00000444533 TMEM39BQ9GZU3 492 aa16.98■□□□□ 0.31
SSBP3-208ENST00000444533 HIP1O00291 1037 aa16.97■□□□□ 0.31
SSBP3-208ENST00000444533 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
SSBP3-208ENST00000444533 RHBDL3P58872 404 aa16.97■□□□□ 0.31
SSBP3-208ENST00000444533 PAXIP1Q6ZW49 1069 aaPredicted RBP16.97■□□□□ 0.31
SSBP3-208ENST00000444533 ADGRA1Q86SQ6 560 aa16.97■□□□□ 0.31
SSBP3-208ENST00000444533 AMOTL1Q8IY63 956 aa16.97■□□□□ 0.31
SSBP3-208ENST00000444533 TGFBRAP1Q8WUH2 860 aa16.97■□□□□ 0.31
SSBP3-208ENST00000444533 APPBP2Q92624 585 aa16.97■□□□□ 0.31
SSBP3-208ENST00000444533 TRIM34Q9BYJ4 488 aa16.97■□□□□ 0.31
SSBP3-208ENST00000444533 RPAP1Q9BWH6 1393 aaPredicted RBP16.97■□□□□ 0.31
SSBP3-208ENST00000444533 IREB2P48200 963 aaKnown RBP16.96■□□□□ 0.31
SSBP3-208ENST00000444533 DYNLL1P63167 89 aaKnown RBP16.96■□□□□ 0.31
SSBP3-208ENST00000444533 FMR1Q06787 632 aaKnown RBP eCLIP16.96■□□□□ 0.31
SSBP3-208ENST00000444533 NFIAQ12857 509 aa16.96■□□□□ 0.31
SSBP3-208ENST00000444533 DHX36Q9H2U1 1008 aaKnown RBP16.96■□□□□ 0.31
SSBP3-208ENST00000444533 TRPM7Q96QT4 1865 aa16.96■□□□□ 0.31
SSBP3-208ENST00000444533 TCRBV5S4A2TA0A5A2 114 aa16.95■□□□□ 0.3
SSBP3-208ENST00000444533 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
SSBP3-208ENST00000444533 MBD4O95243 580 aa16.95■□□□□ 0.3
SSBP3-208ENST00000444533 HLA-DOAP06340 250 aa16.95■□□□□ 0.3
SSBP3-208ENST00000444533 PDE4AP27815 886 aa16.95■□□□□ 0.3
SSBP3-208ENST00000444533 TTC22Q5TAA0 569 aa16.95■□□□□ 0.3
SSBP3-208ENST00000444533 NBPF12Q5TAG4 269 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms