RNA–Protein interactions for RNA: ENST00000442398.6

C2CD3-207, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 3,951 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-207ENST00000442398 RTN1Q16799 776 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 OLFM4Q6UX06 510 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.13□□□□□ -1.27
C2CD3-207ENST00000442398 MRPS27Q92552 414 aaKnown RBP7.13□□□□□ -1.27
C2CD3-207ENST00000442398 CCDC34Q96HJ3 373 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 MKNK2Q9HBH9 465 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 DENND2AQ9ULE3 1009 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 TSPY2A6NKD2 308 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 ADD2P35612 726 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 NKX1-1Q15270 411 aaPredicted RBP7.13□□□□□ -1.27
C2CD3-207ENST00000442398 UVSSAQ2YD98 709 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 TPTE2Q6XPS3 522 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 LRP10Q7Z4F1 713 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 IFNL3Q8IZI9 196 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 KCNB2Q92953 911 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 PPP1R9BQ96SB3 815 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 LLPHQ9BRT6 129 aaKnown RBP7.13□□□□□ -1.27
C2CD3-207ENST00000442398 RNF41Q9H4P4 317 aaPredicted RBP7.13□□□□□ -1.27
C2CD3-207ENST00000442398 BRMS1Q9HCU9 246 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 ANO10Q9NW15 660 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 AATFQ9NY61 560 aaKnown RBP eCLIP7.13□□□□□ -1.27
C2CD3-207ENST00000442398 KCNJ14Q9UNX9 436 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 RIPOR2Q9Y4F9 1068 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 MED23Q9ULK4 1368 aa7.13□□□□□ -1.27
C2CD3-207ENST00000442398 LRP6O75581 1613 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 ANKRD36CQ5JPF3 1778 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 C6orf229H3BNL8 230 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 PTGS1P23219 599 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 CDCA7Q9BWT1 371 aaPredicted RBP7.12□□□□□ -1.27
C2CD3-207ENST00000442398 KRT23Q9C075 422 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 F8W031 263 aaPredicted RBP7.12□□□□□ -1.27
C2CD3-207ENST00000442398 ST3GAL1Q11201 340 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 KLHL10Q6JEL2 608 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 HOMER1Q86YM7 354 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 AOPEPQ8N6M6 819 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 RPGRQ92834 1020 aaKnown RBP7.12□□□□□ -1.27
C2CD3-207ENST00000442398 ZNF274Q96GC6 653 aaPredicted RBP7.12□□□□□ -1.27
C2CD3-207ENST00000442398 C16orf45Q96MC5 204 aaPredicted RBP7.12□□□□□ -1.27
C2CD3-207ENST00000442398 SLC4A9Q96Q91 983 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 CBX8Q9HC52 389 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 TRMT1Q9NXH9 659 aaKnown RBP7.12□□□□□ -1.27
C2CD3-207ENST00000442398 ARAP2Q8WZ64 1704 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 CYP2D7A0A087X1C5 515 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 CCDC196A0A1B0GTZ2 297 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 MARCH6O60337 910 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 SYKP43405 635 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 STX1AQ16623 288 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 IFIT1BQ5T764 474 aaKnown RBP7.12□□□□□ -1.27
C2CD3-207ENST00000442398 CATIPQ7Z7H3 387 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 MARCH10Q8NA82 808 aaPredicted RBP7.12□□□□□ -1.27
C2CD3-207ENST00000442398 CNNM3Q8NE01 707 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 ESR2Q92731 530 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 HOOK1Q9UJC3 728 aaKnown RBP7.12□□□□□ -1.27
C2CD3-207ENST00000442398 NOL7Q9UMY1 257 aaKnown RBP7.12□□□□□ -1.27
C2CD3-207ENST00000442398 STX8Q9UNK0 236 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 CLIC4Q9Y696 253 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 RREB1Q92766 1687 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 LAMA4Q16363 1823 aa7.12□□□□□ -1.27
C2CD3-207ENST00000442398 COL5A2P05997 1499 aaPredicted RBP7.11□□□□□ -1.27
C2CD3-207ENST00000442398 RFX7Q2KHR2 1363 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 PATL2C9JE40 543 aaKnown RBP7.11□□□□□ -1.27
C2CD3-207ENST00000442398 TBC1D10CQ8IV04 446 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 LCORLQ8N3X6 602 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 WASF1Q92558 559 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 CLSTN2Q9H4D0 955 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 MCM9Q9NXL9 1143 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 USP21Q9UK80 565 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 KCPQ6ZWJ8 1503 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 PALLDQ8WX93 1383 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 TRIM28Q13263 835 aaKnown RBP7.11□□□□□ -1.27
C2CD3-207ENST00000442398 KRT40Q6A162 431 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 CTCFLQ8NI51 663 aaPredicted RBP7.11□□□□□ -1.27
C2CD3-207ENST00000442398 KCNG4Q8TDN1 519 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 CNNM2Q9H8M5 875 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 VAT1LQ9HCJ6 419 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 FBXO3Q9UK99 471 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 UBN2Q6ZU65 1347 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 ERVV-1B6SEH8 477 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 LMOD1P29536 600 aaPredicted RBP7.11□□□□□ -1.27
C2CD3-207ENST00000442398 RPS8P62241 208 aaKnown RBP7.11□□□□□ -1.27
C2CD3-207ENST00000442398 DYNLL1P63167 89 aaKnown RBP7.11□□□□□ -1.27
C2CD3-207ENST00000442398 RESTQ13127 1097 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 ITPK1Q13572 414 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 CFAP100Q494V2 611 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 FAM47AQ5JRC9 791 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 AKNAD1Q5T1N1 836 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 FAM177A1Q8N128 213 aaPredicted RBP7.11□□□□□ -1.27
C2CD3-207ENST00000442398 PGBD1Q96JS3 809 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 CARMIL3Q8ND23 1372 aa7.11□□□□□ -1.27
C2CD3-207ENST00000442398 CTAGE5O15320 804 aa7.1□□□□□ -1.27
C2CD3-207ENST00000442398 CSF1RP07333 972 aa7.1□□□□□ -1.27
C2CD3-207ENST00000442398 HIBADHP31937 336 aaKnown RBP7.1□□□□□ -1.27
C2CD3-207ENST00000442398 FAM160A1Q05DH4 1040 aa7.1□□□□□ -1.27
C2CD3-207ENST00000442398 NOLC1Q14978 699 aaKnown RBP eCLIP7.1□□□□□ -1.27
C2CD3-207ENST00000442398 UBE3CQ15386 1083 aa7.1□□□□□ -1.27
C2CD3-207ENST00000442398 ZSWIM5Q9P217 1185 aa7.1□□□□□ -1.27
C2CD3-207ENST00000442398 STRCQ7RTU9 1775 aa7.1□□□□□ -1.27
C2CD3-207ENST00000442398 USP17L12C9JPN9 530 aa7.1□□□□□ -1.27
C2CD3-207ENST00000442398 USP17L21D6R901 530 aa7.1□□□□□ -1.27
C2CD3-207ENST00000442398 MYSM1Q5VVJ2 828 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms