RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SART3Q15020 963 aaKnown RBP15.47■□□□□ 0.07
CPSF4-206ENST00000441580 ZNF827Q17R98 1081 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 AKNAD1Q5T1N1 836 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 IFFO2Q5TF58 517 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 KLHL34Q8N239 644 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 NLGN1Q8N2Q7 840 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 MIGA1Q8NAN2 632 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 NAV1Q8NEY1 1877 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 WDR66Q8TBY9 1149 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 GPT2Q8TD30 523 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 RIOK1Q9BRS2 568 aaKnown RBP15.47■□□□□ 0.07
CPSF4-206ENST00000441580 ZSCAN16Q9H4T2 348 aaPredicted RBP15.47■□□□□ 0.07
CPSF4-206ENST00000441580 TFCP2L1Q9NZI6 479 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 ANAPC4Q9UJX5 808 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 NAP1L2Q9ULW6 460 aaPredicted RBP15.47■□□□□ 0.07
CPSF4-206ENST00000441580 DLEC1Q9Y238 1755 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 ELP1O95163 1332 aa15.46■□□□□ 0.07
CPSF4-206ENST00000441580 ECM29Q5VYK3 1845 aa15.46■□□□□ 0.07
CPSF4-206ENST00000441580 BBOX1O75936 387 aa15.46■□□□□ 0.07
CPSF4-206ENST00000441580 APBA3O96018 575 aa15.46■□□□□ 0.07
CPSF4-206ENST00000441580 RCAN1P53805 252 aa15.46■□□□□ 0.07
CPSF4-206ENST00000441580 MFSD6Q6ZSS7 791 aa15.46■□□□□ 0.07
CPSF4-206ENST00000441580 CERS3Q8IU89 383 aa15.46■□□□□ 0.07
CPSF4-206ENST00000441580 GGA1Q9UJY5 639 aa15.46■□□□□ 0.07
CPSF4-206ENST00000441580 CNPY2Q9Y2B0 182 aa15.46■□□□□ 0.07
CPSF4-206ENST00000441580 B4E1Z4 1266 aa15.45■□□□□ 0.06
CPSF4-206ENST00000441580 FIBPO43427 364 aa15.45■□□□□ 0.06
CPSF4-206ENST00000441580 LIFRP42702 1097 aa15.45■□□□□ 0.06
CPSF4-206ENST00000441580 GSTO1P78417 241 aa15.45■□□□□ 0.06
CPSF4-206ENST00000441580 PPARAQ07869 468 aa15.45■□□□□ 0.06
CPSF4-206ENST00000441580 CHAF1AQ13111 956 aaPredicted RBP15.45■□□□□ 0.06
CPSF4-206ENST00000441580 ZSCAN23Q3MJ62 389 aa15.45■□□□□ 0.06
CPSF4-206ENST00000441580 CPLX2Q6PUV4 134 aaKnown RBP15.45■□□□□ 0.06
CPSF4-206ENST00000441580 CHST3Q7LGC8 479 aa15.45■□□□□ 0.06
CPSF4-206ENST00000441580 SGMS1Q86VZ5 419 aa15.45■□□□□ 0.06
CPSF4-206ENST00000441580 DZIP1Q86YF9 867 aaKnown RBP15.45■□□□□ 0.06
CPSF4-206ENST00000441580 NSUN4Q96CB9 384 aaKnown RBP15.45■□□□□ 0.06
CPSF4-206ENST00000441580 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
CPSF4-206ENST00000441580 PODXL2Q9NZ53 605 aa15.45■□□□□ 0.06
CPSF4-206ENST00000441580 CPLX1O14810 134 aa15.44■□□□□ 0.06
CPSF4-206ENST00000441580 UFL1O94874 794 aa15.44■□□□□ 0.06
CPSF4-206ENST00000441580 MECOMQ03112 1051 aa15.44■□□□□ 0.06
CPSF4-206ENST00000441580 ADGRA1Q86SQ6 560 aa15.44■□□□□ 0.06
CPSF4-206ENST00000441580 USP48Q86UV5 1035 aa15.44■□□□□ 0.06
CPSF4-206ENST00000441580 PROM2Q8N271 834 aa15.44■□□□□ 0.06
CPSF4-206ENST00000441580 TDRD7Q8NHU6 1098 aaKnown RBP15.44■□□□□ 0.06
CPSF4-206ENST00000441580 SCAND2PQ9GZW5 306 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-206ENST00000441580 ARPP21Q9UBL0 812 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-206ENST00000441580 TCHHQ07283 1943 aa15.44■□□□□ 0.06
CPSF4-206ENST00000441580 DDX60LQ5H9U9 1706 aaKnown RBP15.43■□□□□ 0.06
CPSF4-206ENST00000441580 ERICH2A1L162 156 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 PPEF1O14829 653 aaPredicted RBP15.43■□□□□ 0.06
CPSF4-206ENST00000441580 PRKAB2O43741 272 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 CTDNEP1O95476 244 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 METAP2P50579 478 aaKnown RBP eCLIP15.43■□□□□ 0.06
CPSF4-206ENST00000441580 CCT2P78371 535 aaKnown RBP15.43■□□□□ 0.06
CPSF4-206ENST00000441580 DNM1Q05193 864 aaKnown RBP15.43■□□□□ 0.06
CPSF4-206ENST00000441580 RESTQ13127 1097 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 TMEM67Q5HYA8 995 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 ATL3Q6DD88 541 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 APOA5Q6Q788 366 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 CYB5R4Q7L1T6 521 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 DDX11Q96FC9 970 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 CHAMP1Q96JM3 812 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 GRPEL1Q9HAV7 217 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 STK36Q9NRP7 1315 aa15.43■□□□□ 0.06
CPSF4-206ENST00000441580 LDHBP07195 334 aaKnown RBP15.42■□□□□ 0.06
CPSF4-206ENST00000441580 GPSM2P81274 684 aa15.42■□□□□ 0.06
CPSF4-206ENST00000441580 CTDSPL2Q05D32 466 aa15.42■□□□□ 0.06
CPSF4-206ENST00000441580 NFXL1Q6ZNB6 911 aa15.42■□□□□ 0.06
CPSF4-206ENST00000441580 ESR2Q92731 530 aa15.42■□□□□ 0.06
CPSF4-206ENST00000441580 NOL10Q9BSC4 688 aaKnown RBP15.42■□□□□ 0.06
CPSF4-206ENST00000441580 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
CPSF4-206ENST00000441580 NCOA5Q9HCD5 579 aaKnown RBP15.42■□□□□ 0.06
CPSF4-206ENST00000441580 ATP8A2Q9NTI2 1148 aa15.42■□□□□ 0.06
CPSF4-206ENST00000441580 BRPF3Q9ULD4 1205 aa15.42■□□□□ 0.06
CPSF4-206ENST00000441580 HPS5Q9UPZ3 1129 aa15.42■□□□□ 0.06
CPSF4-206ENST00000441580 BAZ2AQ9UIF9 1905 aaKnown RBP15.41■□□□□ 0.06
CPSF4-206ENST00000441580 CCDC69A6NI79 296 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 WTIPA6NIX2 430 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-206ENST00000441580 GOLGA8AA7E2F4 631 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 ZBTB43O43298 467 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 KDM4AO75164 1064 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 SLC3A2P08195 630 aaKnown RBP15.41■□□□□ 0.06
CPSF4-206ENST00000441580 NPR1P16066 1061 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 PRDX5P30044 214 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 PDE6BP35913 854 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 FOXD4L6Q3SYB3 417 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-206ENST00000441580 CCDC183Q5T5S1 534 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 FOXD4L3Q6VB84 417 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-206ENST00000441580 SYNE3Q6ZMZ3 975 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 TMTC2Q8N394 836 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 TBC1D22AQ8WUA7 517 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 SDR42E1Q8WUS8 393 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 GDPD2Q9HCC8 539 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 PARP3Q9Y6F1 533 aa15.41■□□□□ 0.06
CPSF4-206ENST00000441580 ROBO3Q96MS0 1386 aa15.4■□□□□ 0.06
CPSF4-206ENST00000441580 IFIT3O14879 490 aaKnown RBP15.4■□□□□ 0.06
CPSF4-206ENST00000441580 LETM1O95202 739 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-206ENST00000441580 LDHCP07864 332 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms