RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 NAPBQ9H115 298 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 LY9Q9HBG7 655 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 MBD4O95243 580 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 TPM2P07951 284 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 FGRP09769 529 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 CDC25BP30305 580 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 METAP2P50579 478 aaKnown RBP eCLIP9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 KIF23Q02241 960 aaPredicted RBP9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 MYSM1Q5VVJ2 828 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 SARM1Q6SZW1 724 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 SASS6Q6UVJ0 657 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 CHST3Q7LGC8 479 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 CCAR1Q8IX12 1150 aaKnown RBP9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 ELOA2Q8IYF1 753 aaPredicted RBP9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 WASF1Q92558 559 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 GPHNQ9NQX3 736 aaPredicted RBP9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 DENND2AQ9ULE3 1009 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 CACNA1SQ13698 1873 aa9.56□□□□□ -0.88
SPIRE1-204ENST00000440472 LY75O60449 1722 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 KIAA1551Q9HCM1 1747 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 GOLGA6L6A8MZA4 724 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 ZBTB43O43298 467 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 IFNAR1P17181 557 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 FBXO33Q7Z6M2 555 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 FMR1NBQ8N0W7 255 aaPredicted RBP9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 HELBQ8NG08 1087 aaPredicted RBP9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 MRPS27Q92552 414 aaKnown RBP9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 TIGD1Q96MW7 591 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 DTNBO60941 627 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 PPP6R2O75170 966 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 APPP05067 770 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 PTMAP06454 111 aaKnown RBP9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 U2AF2P26368 475 aaKnown RBP eCLIP9.55□□□□□ -0.888e-9■■■■■ 32.9
SPIRE1-204ENST00000440472 BCAMP50895 628 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 SART3Q15020 963 aaKnown RBP9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 STX1AQ16623 288 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 MFSD6Q6ZSS7 791 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 BRIP1Q9BX63 1249 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 ANKRD2Q9GZV1 360 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 CBX8Q9HC52 389 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 FAM217BQ9NTX9 383 aaPredicted RBP9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 PCDHA7Q9UN72 937 aa9.55□□□□□ -0.88
SPIRE1-204ENST00000440472 NEDD4P46934 1319 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 SPATA31A6Q5VVP1 1343 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 MAST2Q6P0Q8 1798 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 BTAF1O14981 1849 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 CCDC196A0A1B0GTZ2 297 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 B4E1Z4 1266 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 KINO60870 393 aaKnown RBP9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 FMNL1O95466 1100 aaPredicted RBP9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 CMA1P23946 247 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 KIAA2012Q0VF49 1180 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 SLC39A14Q15043 492 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 ERFEQ4G0M1 354 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 ANO6Q4KMQ2 910 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 TMEM67Q5HYA8 995 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 PLA2G4DQ86XP0 818 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 PIBF1Q8WXW3 757 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 BPIFA3Q9BQP9 254 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 SPTLC3Q9NUV7 552 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 ANO10Q9NW15 660 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 ZSWIM5Q9P217 1185 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 MINPP1Q9UNW1 487 aa9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.54□□□□□ -0.88
SPIRE1-204ENST00000440472 SPTLC2O15270 562 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 KCNQ2O43526 872 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 IQCB1Q15051 598 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 CAVIN4Q5BKX8 364 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 ANO1Q5XXA6 986 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 SYNE3Q6ZMZ3 975 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 JMYQ8N9B5 988 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 RIOK1Q9BRS2 568 aaKnown RBP9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 GOLPH3LQ9H4A5 285 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 ARMT1Q9H993 441 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 NAP1L2Q9ULW6 460 aaPredicted RBP9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 DLEC1Q9Y238 1755 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 ECM29Q5VYK3 1845 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 GOLGA8AA7E2F4 631 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 AP5Z1O43299 807 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 IARSP41252 1262 aaKnown RBP9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 ZNF165P49910 485 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 STK38Q15208 465 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 AXDND1Q5T1B0 1012 aaPredicted RBP9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 LCORLQ8N3X6 602 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 FSIP1Q8NA03 581 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 NOL10Q9BSC4 688 aaKnown RBP9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 ALG1Q9BT22 464 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 LRP2BPQ9P2M1 347 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 SLC12A7Q9Y666 1083 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 SLC4A4Q9Y6R1 1079 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 TAF1LQ8IZX4 1826 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 COL4A1P02462 1669 aa9.53□□□□□ -0.88
SPIRE1-204ENST00000440472 COL1A1P02452 1464 aaPredicted RBP9.52□□□□□ -0.89
SPIRE1-204ENST00000440472 CCDC69A6NI79 296 aa9.52□□□□□ -0.89
SPIRE1-204ENST00000440472 IFIT3O14879 490 aaKnown RBP9.52□□□□□ -0.89
SPIRE1-204ENST00000440472 YY1P25490 414 aa9.52□□□□□ -0.89
SPIRE1-204ENST00000440472 CDC27P30260 824 aa9.52□□□□□ -0.89
SPIRE1-204ENST00000440472 ME1P48163 572 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms