RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 KCNH3Q9ULD8 1083 aa23.32■■□□□ 1.32
FMR1-208ENST00000440235 SIGLEC1Q9BZZ2 1709 aa23.31■■□□□ 1.32
FMR1-208ENST00000440235 MAGEB6Q8N7X4 407 aa23.31■■□□□ 1.32
FMR1-208ENST00000440235 MAP3K5Q99683 1374 aa23.31■■□□□ 1.32
FMR1-208ENST00000440235 CPSF1Q10570 1443 aaKnown RBP23.31■■□□□ 1.32
FMR1-208ENST00000440235 HEATR3Q7Z4Q2 680 aa23.31■■□□□ 1.32
FMR1-208ENST00000440235 UBE4AQ14139 1066 aa23.3■■□□□ 1.32
FMR1-208ENST00000440235 KANK3Q6NY19 840 aa23.3■■□□□ 1.32
FMR1-208ENST00000440235 COBLO75128 1261 aa23.3■■□□□ 1.32
FMR1-208ENST00000440235 KIF20AO95235 890 aa23.3■■□□□ 1.32
FMR1-208ENST00000440235 DDX21Q9NR30 783 aaKnown RBP eCLIP23.3■■□□□ 1.32
FMR1-208ENST00000440235 A1BGP04217 495 aa23.3■■□□□ 1.32
FMR1-208ENST00000440235 ALS2CR12Q96Q35 445 aa23.3■■□□□ 1.32
FMR1-208ENST00000440235 PNOCQ13519 176 aa23.3■■□□□ 1.32
FMR1-208ENST00000440235 CCDC122Q5T0U0 273 aa23.29■■□□□ 1.32
FMR1-208ENST00000440235 CEP57Q86XR8 500 aa23.29■■□□□ 1.32
FMR1-208ENST00000440235 KRI1Q8N9T8 703 aaKnown RBP23.29■■□□□ 1.32
FMR1-208ENST00000440235 CCDC42Q96M95 316 aa23.29■■□□□ 1.32
FMR1-208ENST00000440235 KAT14Q9H8E8 782 aa23.29■■□□□ 1.32
FMR1-208ENST00000440235 TLDC2A0PJX2 215 aa23.29■■□□□ 1.32
FMR1-208ENST00000440235 TLR7Q9NYK1 1049 aaKnown RBP23.29■■□□□ 1.32
FMR1-208ENST00000440235 IFT172Q9UG01 1749 aa23.29■■□□□ 1.32
FMR1-208ENST00000440235 ADD1P35611 737 aaKnown RBP23.29■■□□□ 1.32
FMR1-208ENST00000440235 SPAG5Q96R06 1193 aa23.29■■□□□ 1.32
FMR1-208ENST00000440235 POTEB2H3BUK9 544 aa23.28■■□□□ 1.32
FMR1-208ENST00000440235 GCP02774 474 aa23.28■■□□□ 1.32
FMR1-208ENST00000440235 TSG101Q99816 390 aa23.28■■□□□ 1.32
FMR1-208ENST00000440235 ORAI2Q96SN7 254 aa23.28■■□□□ 1.32
FMR1-208ENST00000440235 ZFYP08048 801 aaPredicted RBP23.28■■□□□ 1.32
FMR1-208ENST00000440235 DIS3L2Q8IYB7 885 aaKnown RBP23.28■■□□□ 1.32
FMR1-208ENST00000440235 ARHGEF10O15013 1369 aa23.28■■□□□ 1.32
FMR1-208ENST00000440235 KIAA0232Q92628 1395 aa23.28■■□□□ 1.32
FMR1-208ENST00000440235 CPS1P31327 1500 aa23.28■■□□□ 1.32
FMR1-208ENST00000440235 KIF5AQ12840 1032 aa23.28■■□□□ 1.32
FMR1-208ENST00000440235 TTF1Q15361 905 aaPredicted RBP23.28■■□□□ 1.32
FMR1-208ENST00000440235 EXOC1Q9NV70 894 aa23.28■■□□□ 1.32
FMR1-208ENST00000440235 NLRP1Q9C000 1473 aa23.27■■□□□ 1.32
FMR1-208ENST00000440235 HGSO14964 777 aaPredicted RBP23.27■■□□□ 1.32
FMR1-208ENST00000440235 OAS2P29728 719 aaKnown RBP23.27■■□□□ 1.32
FMR1-208ENST00000440235 AKR1B15C9JRZ8 316 aaPredicted RBP23.27■■□□□ 1.32
FMR1-208ENST00000440235 RNMTO43148 476 aaKnown RBP23.27■■□□□ 1.32
FMR1-208ENST00000440235 MBD4O95243 580 aa23.27■■□□□ 1.32
FMR1-208ENST00000440235 CYLC1P35663 651 aaPredicted RBP23.27■■□□□ 1.32
FMR1-208ENST00000440235 NBPF6Q5VWK0 638 aa23.27■■□□□ 1.32
FMR1-208ENST00000440235 NBPF4Q96M43 638 aa23.27■■□□□ 1.32
FMR1-208ENST00000440235 ESR2Q92731 530 aa23.27■■□□□ 1.32
FMR1-208ENST00000440235 LUC7L2Q9Y383 392 aaKnown RBP23.27■■□□□ 1.32
FMR1-208ENST00000440235 CHMP4BP1P59074 171 aa23.26■■□□□ 1.31
FMR1-208ENST00000440235 CALML4Q96GE6 196 aa23.26■■□□□ 1.31
FMR1-208ENST00000440235 IP6K1Q92551 441 aa23.26■■□□□ 1.31
FMR1-208ENST00000440235 SLF1Q9BQI6 1058 aa23.26■■□□□ 1.31
FMR1-208ENST00000440235 MRVI1Q9Y6F6 885 aa23.26■■□□□ 1.31
FMR1-208ENST00000440235 PSMA7O14818 248 aa23.26■■□□□ 1.31
FMR1-208ENST00000440235 MCM3P25205 808 aa23.26■■□□□ 1.31
FMR1-208ENST00000440235 SSH3Q8TE77 659 aa23.26■■□□□ 1.31
FMR1-208ENST00000440235 CEP112Q8N8E3 955 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 ACSBG1Q96GR2 724 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 CLIC6Q96NY7 704 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.25■■□□□ 1.311e-6■■■■□ 20.2
FMR1-208ENST00000440235 RIMBP3CA6NJZ7 1639 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 RIMBP3BA6NNM3 1639 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 RIMBP3Q9UFD9 1639 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 GPAA1O43292 621 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 HSF2BPO75031 334 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 MYO5BQ9ULV0 1848 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 BRAPQ7Z569 592 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 TAB2Q9NYJ8 693 aa23.25■■□□□ 1.31
FMR1-208ENST00000440235 COL3A1P02461 1466 aaPredicted RBP23.24■■□□□ 1.31
FMR1-208ENST00000440235 RICTORQ6R327 1708 aa23.24■■□□□ 1.31
FMR1-208ENST00000440235 KRT40Q6A162 431 aa23.24■■□□□ 1.31
FMR1-208ENST00000440235 LRRC8AQ8IWT6 810 aa23.24■■□□□ 1.31
FMR1-208ENST00000440235 KIAA1524Q8TCG1 905 aa23.24■■□□□ 1.31
FMR1-208ENST00000440235 F8W031 263 aaPredicted RBP23.24■■□□□ 1.31
FMR1-208ENST00000440235 EBAG9O00559 213 aa23.24■■□□□ 1.31
FMR1-208ENST00000440235 PROSER3Q2NL68 480 aa23.24■■□□□ 1.31
FMR1-208ENST00000440235 PTCH1Q13635 1447 aa23.24■■□□□ 1.31
FMR1-208ENST00000440235 TMEM266Q2M3C6 531 aa23.24■■□□□ 1.31
FMR1-208ENST00000440235 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.24■■□□□ 1.31
FMR1-208ENST00000440235 CRACR2BQ8N4Y2 399 aaPredicted RBP23.24■■□□□ 1.31
FMR1-208ENST00000440235 ZNF496Q96IT1 587 aaPredicted RBP23.24■■□□□ 1.31
FMR1-208ENST00000440235 RASSF4Q9H2L5 321 aa23.24■■□□□ 1.31
FMR1-208ENST00000440235 PPP1R1BQ9UD71 204 aaPredicted RBP23.24■■□□□ 1.31
FMR1-208ENST00000440235 CTNND2Q9UQB3 1225 aa23.24■■□□□ 1.31
FMR1-208ENST00000440235 V9GY48 417 aaPredicted RBP23.24■■□□□ 1.31
FMR1-208ENST00000440235 ELP1O95163 1332 aa23.23■■□□□ 1.31
FMR1-208ENST00000440235 SEC31AO94979 1220 aaKnown RBP23.23■■□□□ 1.31
FMR1-208ENST00000440235 KRT9P35527 623 aa23.23■■□□□ 1.31
FMR1-208ENST00000440235 C11orf57Q6ZUT1 292 aaPredicted RBP23.23■■□□□ 1.31
FMR1-208ENST00000440235 KBTBD3Q8NAB2 608 aa23.23■■□□□ 1.31
FMR1-208ENST00000440235 ARMT1Q9H993 441 aa23.23■■□□□ 1.31
FMR1-208ENST00000440235 ZNF790Q6PG37 636 aa23.23■■□□□ 1.31
FMR1-208ENST00000440235 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
FMR1-208ENST00000440235 HPDP32754 393 aaPredicted RBP23.22■■□□□ 1.31
FMR1-208ENST00000440235 KRT86O43790 486 aa23.22■■□□□ 1.31
FMR1-208ENST00000440235 MEX3CQ5U5Q3 659 aaKnown RBP23.22■■□□□ 1.31
FMR1-208ENST00000440235 VPS36Q86VN1 386 aa23.22■■□□□ 1.31
FMR1-208ENST00000440235 CTAGE1Q96RT6 745 aa23.22■■□□□ 1.31
FMR1-208ENST00000440235 BLZF1Q9H2G9 400 aa23.22■■□□□ 1.31
FMR1-208ENST00000440235 KIAA1468Q9P260 1216 aa23.22■■□□□ 1.31
FMR1-208ENST00000440235 PRAMEF22A3QJZ6 481 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms