RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 GRIPAP1Q4V328 841 aa23.27■■□□□ 1.32
APTR-204ENST00000440088 GIMAP6Q6P9H5 292 aa23.27■■□□□ 1.32
APTR-204ENST00000440088 AGXT2Q9BYV1 514 aa23.27■■□□□ 1.32
APTR-204ENST00000440088 DPEP1P16444 411 aa23.26■■□□□ 1.31
APTR-204ENST00000440088 PODNQ7Z5L7 613 aa23.26■■□□□ 1.31
APTR-204ENST00000440088 MB21D2Q8IYB1 491 aaPredicted RBP23.26■■□□□ 1.31
APTR-204ENST00000440088 LRRC2Q9BYS8 371 aa23.26■■□□□ 1.31
APTR-204ENST00000440088 NUCB2P80303 420 aa23.26■■□□□ 1.31
APTR-204ENST00000440088 DIXDC1Q155Q3 683 aa23.26■■□□□ 1.31
APTR-204ENST00000440088 FBXL16Q8N461 479 aa23.26■■□□□ 1.31
APTR-204ENST00000440088 BRF1Q92994 677 aa23.26■■□□□ 1.31
APTR-204ENST00000440088 SUGT1Q9Y2Z0 365 aa23.26■■□□□ 1.31
APTR-204ENST00000440088 SNED1Q8TER0 1413 aa23.26■■□□□ 1.31
APTR-204ENST00000440088 MYH2Q9UKX2 1941 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 C21orf2O43822 256 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 BAG3O95817 575 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 KCNA3P22001 575 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 RAB3GAP1Q15042 981 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 CCDC83Q8IWF9 413 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 SLF2Q8IX21 1173 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 SUPT20HQ8NEM7 779 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 NOL10Q9BSC4 688 aaKnown RBP23.25■■□□□ 1.31
APTR-204ENST00000440088 MROH7-TTC4A0A0A0MT08 1334 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 WDR19Q8NEZ3 1342 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 TGFB2P61812 414 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 NFKBIBQ15653 356 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 CERS3Q8IU89 383 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 ATP8A2Q9NTI2 1148 aa23.25■■□□□ 1.31
APTR-204ENST00000440088 TIAM2Q8IVF5 1701 aa23.24■■□□□ 1.31
APTR-204ENST00000440088 CTDSPL2Q05D32 466 aa23.24■■□□□ 1.31
APTR-204ENST00000440088 NBR1Q14596 966 aa23.24■■□□□ 1.31
APTR-204ENST00000440088 AKNAD1Q5T1N1 836 aa23.24■■□□□ 1.31
APTR-204ENST00000440088 CHST3Q7LGC8 479 aa23.24■■□□□ 1.31
APTR-204ENST00000440088 FBXW7Q969H0 707 aa23.24■■□□□ 1.31
APTR-204ENST00000440088 CNNM2Q9H8M5 875 aa23.24■■□□□ 1.31
APTR-204ENST00000440088 PRC1O43663 620 aa23.23■■□□□ 1.31
APTR-204ENST00000440088 PPP4CP60510 307 aa23.23■■□□□ 1.31
APTR-204ENST00000440088 PPARAQ07869 468 aa23.23■■□□□ 1.31
APTR-204ENST00000440088 DBNDD1Q9H9R9 158 aa23.23■■□□□ 1.31
APTR-204ENST00000440088 GOLGB1Q14789 3259 aaKnown RBP23.23■■□□□ 1.31
APTR-204ENST00000440088 CCDC93Q567U6 631 aa23.23■■□□□ 1.31
APTR-204ENST00000440088 MFSD6Q6ZSS7 791 aa23.23■■□□□ 1.31
APTR-204ENST00000440088 STAG1Q8WVM7 1258 aa23.23■■□□□ 1.31
APTR-204ENST00000440088 ANAPC4Q9UJX5 808 aa23.23■■□□□ 1.31
APTR-204ENST00000440088 RTKN2Q8IZC4 609 aa23.22■■□□□ 1.31
APTR-204ENST00000440088 NECAB1Q8N987 351 aa23.22■■□□□ 1.31
APTR-204ENST00000440088 FAM163AQ96GL9 167 aaPredicted RBP23.22■■□□□ 1.31
APTR-204ENST00000440088 ANP32EQ9BTT0 268 aa23.22■■□□□ 1.31
APTR-204ENST00000440088 RNF41Q9H4P4 317 aaPredicted RBP23.22■■□□□ 1.31
APTR-204ENST00000440088 DCP1AQ9NPI6 582 aaPredicted RBP23.22■■□□□ 1.31
APTR-204ENST00000440088 BAZ2AQ9UIF9 1905 aaKnown RBP23.22■■□□□ 1.31
APTR-204ENST00000440088 NEDD4P46934 1319 aa23.22■■□□□ 1.31
APTR-204ENST00000440088 MINDY4BA8MYZ0 360 aa23.21■■□□□ 1.31
APTR-204ENST00000440088 KIAA2012Q0VF49 1180 aa23.21■■□□□ 1.31
APTR-204ENST00000440088 KRT23Q9C075 422 aa23.21■■□□□ 1.31
APTR-204ENST00000440088 SMC3Q9UQE7 1217 aa23.21■■□□□ 1.31
APTR-204ENST00000440088 ANTXR2P58335 489 aa23.21■■□□□ 1.31
APTR-204ENST00000440088 B4E1Z4 1266 aa23.2■■□□□ 1.3
APTR-204ENST00000440088 ECE2O60344 883 aa23.2■■□□□ 1.3
APTR-204ENST00000440088 ST3GAL1Q11201 340 aa23.2■■□□□ 1.3
APTR-204ENST00000440088 AOC3Q16853 763 aa23.2■■□□□ 1.3
APTR-204ENST00000440088 PIM2Q9P1W9 311 aa23.2■■□□□ 1.3
APTR-204ENST00000440088 GPR75-ASB3A0A0A6YYF3 556 aa23.2■■□□□ 1.3
APTR-204ENST00000440088 APOBRQ0VD83 1088 aa23.2■■□□□ 1.3
APTR-204ENST00000440088 STK3Q13188 491 aa23.2■■□□□ 1.3
APTR-204ENST00000440088 CTR9Q6PD62 1173 aa23.2■■□□□ 1.3
APTR-204ENST00000440088 CERS5Q8N5B7 392 aa23.2■■□□□ 1.3
APTR-204ENST00000440088 TNPO1Q92973 898 aaKnown RBP23.2■■□□□ 1.3
APTR-204ENST00000440088 USP17L12C9JPN9 530 aa23.19■■□□□ 1.3
APTR-204ENST00000440088 USP17L21D6R901 530 aa23.19■■□□□ 1.3
APTR-204ENST00000440088 PLCG2P16885 1265 aa23.19■■□□□ 1.3
APTR-204ENST00000440088 BTDP43251 543 aa23.19■■□□□ 1.3
APTR-204ENST00000440088 SH3RF3Q8TEJ3 882 aaPredicted RBP23.19■■□□□ 1.3
APTR-204ENST00000440088 GTF3C6Q969F1 213 aa23.19■■□□□ 1.3
APTR-204ENST00000440088 ARPP21Q9UBL0 812 aaPredicted RBP23.19■■□□□ 1.3
APTR-204ENST00000440088 GAKO14976 1311 aa23.19■■□□□ 1.3
APTR-204ENST00000440088 PKP1Q13835 747 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 SOGA3Q5TF21 947 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 STRIP1Q5VSL9 837 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 ZNF274Q96GC6 653 aaPredicted RBP23.18■■□□□ 1.3
APTR-204ENST00000440088 PSMD1Q99460 953 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 INCENPQ9NQS7 918 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 PPIP5K2O43314 1243 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 USP5P45974 858 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 EVCP57679 992 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 CYB5R4Q7L1T6 521 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 TOMM22Q9NS69 142 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 TACC3Q9Y6A5 838 aa23.18■■□□□ 1.3
APTR-204ENST00000440088 KDM4AO75164 1064 aa23.17■■□□□ 1.3
APTR-204ENST00000440088 TMEM87BQ96K49 555 aa23.17■■□□□ 1.3
APTR-204ENST00000440088 SGIP1Q9BQI5 828 aa23.17■■□□□ 1.3
APTR-204ENST00000440088 TTF2Q9UNY4 1162 aaKnown RBP23.17■■□□□ 1.3
APTR-204ENST00000440088 PFKFB2O60825 505 aa23.16■■□□□ 1.3
APTR-204ENST00000440088 PCP11498 1178 aaKnown RBP23.16■■□□□ 1.3
APTR-204ENST00000440088 FKBP1AP62942 108 aaKnown RBP23.16■■□□□ 1.3
APTR-204ENST00000440088 SBK1Q52WX2 424 aa23.16■■□□□ 1.3
APTR-204ENST00000440088 ZSWIM5Q9P217 1185 aa23.16■■□□□ 1.3
APTR-204ENST00000440088 MKRN1Q9UHC7 482 aaKnown RBP23.16■■□□□ 1.3
APTR-204ENST00000440088 ANGEL1Q9UNK9 670 aaKnown RBP23.16■■□□□ 1.3
APTR-204ENST00000440088 PSDA5PKW4 1024 aaPredicted RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms