RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 KBTBD3Q8NAB2 608 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 BPIFA3Q9BQP9 254 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 INTS13Q9NVM9 706 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 HDAC5Q9UQL6 1122 aa15.64■□□□□ 0.09
PCNX3-202ENST00000439247 ADKP55263 362 aaKnown RBP15.63■□□□□ 0.09
PCNX3-202ENST00000439247 LRRFIP1Q32MZ4 808 aaKnown RBP15.63■□□□□ 0.09
PCNX3-202ENST00000439247 PPP2R2CQ9Y2T4 447 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 A0A0U1RQJ8 604 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 EFCAB8A8MWE9 144 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 NRDCO43847 1150 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 CDC27P30260 824 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 KARSQ15046 597 aaKnown RBP15.63■□□□□ 0.09
PCNX3-202ENST00000439247 ATRIPQ8WXE1 791 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 CLIC6Q96NY7 704 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 PARD6BQ9BYG5 372 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 AGXT2Q9BYV1 514 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 SPATA31A5Q5VU36 1347 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 SPATA31A7Q8IWB4 1347 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 EP400Q96L91 3159 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 H3BQF6 201 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 FOXN1O15353 648 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 CABP4P57796 275 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 TPM4P67936 248 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 TMEM139Q8IV31 216 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 STK11IPQ8N1F8 1099 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 COPRSQ9NQ92 184 aa15.63■□□□□ 0.09
PCNX3-202ENST00000439247 PALLDQ8WX93 1383 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 M0R2C6 588 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 TFRCP02786 760 aaKnown RBP15.62■□□□□ 0.09
PCNX3-202ENST00000439247 HMGB1P09429 215 aaKnown RBP15.62■□□□□ 0.09
PCNX3-202ENST00000439247 RXRAP19793 462 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 PDE4BQ07343 736 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 NEXNQ0ZGT2 675 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 SPECC1Q5M775 1068 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 ZNF790Q6PG37 636 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 UBXN6Q9BZV1 441 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 DENND2AQ9ULE3 1009 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 TOP1P11387 765 aaKnown RBP15.62■□□□□ 0.09
PCNX3-202ENST00000439247 ATL3Q6DD88 541 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 C10orf67Q8IYJ2 551 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 PAG1Q9NWQ8 432 aa15.62■□□□□ 0.09
PCNX3-202ENST00000439247 KCNJ6P48051 423 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 PPP2R3AQ06190 1150 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 CCDC158Q5M9N0 1113 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 ANO1Q5XXA6 986 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 SYNE3Q6ZMZ3 975 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 KCNG4Q8TDN1 519 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 DHX58Q96C10 678 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 MAST3O60307 1309 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 SPATA31A6Q5VVP1 1343 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 KLF18A0A0U1RQI7 1052 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 MTF1Q14872 753 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 ZSCAN26Q16670 478 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 FAM98CQ17RN3 349 aaKnown RBP15.61■□□□□ 0.09
PCNX3-202ENST00000439247 FOXP4Q8IVH2 680 aaPredicted RBP15.61■□□□□ 0.09
PCNX3-202ENST00000439247 CCDC191Q8NCU4 936 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 FBXO18Q8NFZ0 1043 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 NKX2-3Q8TAU0 364 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 ZNF274Q96GC6 653 aaPredicted RBP15.61■□□□□ 0.09
PCNX3-202ENST00000439247 CASQ1P31415 396 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 LMAN1P49257 510 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 VSTM4Q8IW00 320 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 ZNF496Q96IT1 587 aaPredicted RBP15.61■□□□□ 0.09
PCNX3-202ENST00000439247 POLR3EQ9NVU0 708 aa15.61■□□□□ 0.09
PCNX3-202ENST00000439247 GOLGA8BA8MQT2 603 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 SYKP43405 635 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 NKX1-1Q15270 411 aaPredicted RBP15.6■□□□□ 0.09
PCNX3-202ENST00000439247 FUT8Q9BYC5 575 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 SH3TC1Q8TE82 1336 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 UBE2Q2LH0YL09 131 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 MEX3CQ5U5Q3 659 aaKnown RBP15.6■□□□□ 0.09
PCNX3-202ENST00000439247 SHC4Q6S5L8 630 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 IPO4Q8TEX9 1081 aaKnown RBP15.6■□□□□ 0.09
PCNX3-202ENST00000439247 SUGCTQ9HAC7 445 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 USP21Q9UK80 565 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 HPS5Q9UPZ3 1129 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 TOGARAM1Q9Y4F4 1720 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 MRC1P22897 1456 aa15.6■□□□□ 0.09
PCNX3-202ENST00000439247 HEG1Q9ULI3 1381 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 EXOC5O00471 708 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 BMP6P22004 513 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 MYL5Q02045 173 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 WWC2Q6AWC2 1192 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 LMBR1LQ6UX01 489 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 FNBP4Q8N3X1 1017 aaPredicted RBP15.59■□□□□ 0.09
PCNX3-202ENST00000439247 NWD2Q9ULI1 1742 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 PLEKHG2Q9H7P9 1386 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 YEATS4O95619 227 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 FAM193AP78312 1265 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 MAP3K9P80192 1104 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 ZNF827Q17R98 1081 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 CREBRFQ8IUR6 639 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 TRMT44Q8IYL2 757 aaKnown RBP15.59■□□□□ 0.09
PCNX3-202ENST00000439247 TXLNBQ8N3L3 684 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 ZNF594Q96JF6 807 aaPredicted RBP15.59■□□□□ 0.09
PCNX3-202ENST00000439247 METTL22Q9BUU2 404 aaPredicted RBP15.59■□□□□ 0.09
PCNX3-202ENST00000439247 ADAM21Q9UKJ8 722 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 A0A087WZG4 1122 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 IKBKBO14920 756 aa15.59■□□□□ 0.09
PCNX3-202ENST00000439247 CMA1P23946 247 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms