RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 RESTQ13127 1097 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 CAVIN4Q5BKX8 364 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 MAGEB6Q8N7X4 407 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 ANKRD2Q9GZV1 360 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 COL1A1P02452 1464 aaPredicted RBP16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 FGAP02671 866 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 GRAPQ13588 217 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 VPS37DQ86XT2 251 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 SMARCC2Q8TAQ2 1214 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 GRAPLQ8TC17 118 aaPredicted RBP16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 FAM84BQ96KN1 310 aaPredicted RBP16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 DACT1Q9NYF0 836 aa16.26■□□□□ 0.19
PTCHD3-201ENST00000438700 POLRMTO00411 1230 aaKnown RBP16.25■□□□□ 0.19
PTCHD3-201ENST00000438700 POTEAQ6S8J7 498 aa16.25■□□□□ 0.19
PTCHD3-201ENST00000438700 AGXT2Q9BYV1 514 aa16.25■□□□□ 0.19
PTCHD3-201ENST00000438700 PDIA3P30101 505 aaKnown RBP16.25■□□□□ 0.19
PTCHD3-201ENST00000438700 NOLC1Q14978 699 aaKnown RBP eCLIP16.25■□□□□ 0.19
PTCHD3-201ENST00000438700 IMMTQ16891 758 aaKnown RBP16.25■□□□□ 0.19
PTCHD3-201ENST00000438700 MYRIPQ8NFW9 859 aa16.25■□□□□ 0.19
PTCHD3-201ENST00000438700 RPGRQ92834 1020 aaKnown RBP16.25■□□□□ 0.19
PTCHD3-201ENST00000438700 NUP62CLQ9H1M0 184 aa16.25■□□□□ 0.19
PTCHD3-201ENST00000438700 CTNNA3Q9UI47 895 aa16.25■□□□□ 0.19
PTCHD3-201ENST00000438700 ADCY5O95622 1261 aa16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 GUCY1B3Q02153 619 aa16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 COL23A1Q86Y22 540 aaPredicted RBP16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 CKAP2LQ8IYA6 745 aa16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 LLPHQ9BRT6 129 aaKnown RBP16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 MYH13Q9UKX3 1938 aa16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 UVSSAQ2YD98 709 aa16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 PGBD1Q96JS3 809 aa16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 LRP2BPQ9P2M1 347 aa16.24■□□□□ 0.19
PTCHD3-201ENST00000438700 CRY2Q49AN0 593 aa16.23■□□□□ 0.19
PTCHD3-201ENST00000438700 RAB11FIP4Q86YS3 637 aa16.23■□□□□ 0.19
PTCHD3-201ENST00000438700 AIDAQ96BJ3 306 aa16.23■□□□□ 0.19
PTCHD3-201ENST00000438700 CCDC192P0DO97 292 aa16.23■□□□□ 0.19
PTCHD3-201ENST00000438700 MAP3K11Q16584 847 aa16.23■□□□□ 0.19
PTCHD3-201ENST00000438700 FBXO33Q7Z6M2 555 aa16.23■□□□□ 0.19
PTCHD3-201ENST00000438700 ABCF2Q9UG63 623 aa16.23■□□□□ 0.19
PTCHD3-201ENST00000438700 NR1I2O75469 434 aa16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 HMGN5P82970 282 aaKnown RBP16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 PIBF1Q8WXW3 757 aa16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 TNMDQ9H2S6 317 aa16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 ANKIB1Q9P2G1 1089 aa16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 MBD4O95243 580 aa16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 CBX1P83916 185 aa16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 STRBPQ96SI9 672 aaKnown RBP16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 CCDC94Q9BW85 323 aaPredicted RBP16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 ZSCAN16Q9H4T2 348 aaPredicted RBP16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 DENND2AQ9ULE3 1009 aa16.22■□□□□ 0.19
PTCHD3-201ENST00000438700 AP5Z1O43299 807 aa16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 PRC1O43663 620 aa16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 APPP05067 770 aa16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 TXNRD3Q86VQ6 643 aa16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 SMAP1Q8IYB5 467 aaPredicted RBP16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 ZNF274Q96GC6 653 aaPredicted RBP16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 RGPD3A6NKT7 1758 aaPredicted RBP16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 RGPD4Q7Z3J3 1758 aa16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 SALL1Q9NSC2 1324 aa16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 HIBADHP31937 336 aaKnown RBP16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 ARMT1Q9H993 441 aa16.21■□□□□ 0.19
PTCHD3-201ENST00000438700 ZNF213O14771 459 aa16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 KDM4AO75164 1064 aa16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 NAA16Q6N069 864 aaPredicted RBP16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 RALYLQ86SE5 291 aaKnown RBP16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 RBM17Q96I25 401 aaKnown RBP16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 RAI14Q9P0K7 980 aa16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 ANKRD31Q8N7Z5 1873 aa16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 MTERF4Q7Z6M4 381 aaKnown RBP16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 MB21D2Q8IYB1 491 aaPredicted RBP16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 NLGN1Q8N2Q7 840 aa16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 CFAP45Q9UL16 551 aa16.2■□□□□ 0.18
PTCHD3-201ENST00000438700 IRS2Q9Y4H2 1338 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 KLF18A0A0U1RQI7 1052 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 GOLGA8BA8MQT2 603 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 SEMA3EO15041 775 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 ANTXR2P58335 489 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 TYRO3Q06418 890 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 MIGA1Q8NAN2 632 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 CACNA1SQ13698 1873 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 XDHP47989 1333 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 CYP7A1P22680 504 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 ADD1P35611 737 aaKnown RBP16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 OTUD7BQ6GQQ9 843 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 LCORLQ8N3X6 602 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 FLAD1Q8NFF5 587 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 NCOA7Q8NI08 942 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 MRVI1Q9Y6F6 885 aa16.19■□□□□ 0.18
PTCHD3-201ENST00000438700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 FDPSP14324 419 aaKnown RBP16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 ZSCAN20P17040 1043 aaPredicted RBP16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 ADGRA1Q86SQ6 560 aa16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 NKX2-3Q8TAU0 364 aa16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 USP28Q96RU2 1077 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms