RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PPP2R5BQ15173 497 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 MAK16Q9BXY0 300 aaKnown RBP17.86■□□□□ 0.45
PTPN13-204ENST00000436978 CALCOCO1Q9P1Z2 691 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 SKILP12757 684 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 ALDH1B1P30837 517 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 TYRO3Q06418 890 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 FAM212AQ96EL1 285 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 CCDC42Q96M95 316 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 EFCAB6Q5THR3 1501 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 RILPL1Q5EBL4 403 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 KIF24Q5T7B8 1368 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 WDR44Q5JSH3 913 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 HELBQ8NG08 1087 aaPredicted RBP17.86■□□□□ 0.45
PTPN13-204ENST00000436978 CCNT1O60563 726 aaKnown RBP17.86■□□□□ 0.45
PTPN13-204ENST00000436978 TESK2Q96S53 571 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 MLH3Q9UHC1 1453 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 GIMAP7Q8NHV1 300 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 KIAA1524Q8TCG1 905 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 EXOC7Q9UPT5 735 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 OPA1O60313 960 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 SAP30BPQ9UHR5 308 aaKnown RBP17.85■□□□□ 0.45
PTPN13-204ENST00000436978 SLC8A3P57103 927 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 SNX16P57768 344 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 OTUD6BQ8N6M0 293 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 TCEANC2Q96MN5 208 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 GRM1Q13255 1194 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 CCDC117Q8IWD4 279 aaPredicted RBP17.85■□□□□ 0.45
PTPN13-204ENST00000436978 TTC14Q96N46 770 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 TRIM14Q14142 442 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 VWA3BQ502W6 1294 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 CNGA4Q8IV77 575 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 IFT74Q96LB3 600 aa17.85■□□□□ 0.45
PTPN13-204ENST00000436978 TAF12Q16514 161 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 ANKS4BQ8N8V4 417 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 SBNO2Q9Y2G9 1366 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 ARFGAP3Q9NP61 516 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 PHACTR3Q96KR7 559 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 CCDC87Q9NVE4 849 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 TBC1D22AQ8WUA7 517 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 GJA3Q9Y6H8 435 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 APPBP2Q92624 585 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 ZBTB21Q9ULJ3 1066 aa17.84■□□□□ 0.45
PTPN13-204ENST00000436978 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.84■□□□□ 0.45
PTPN13-204ENST00000436978 DPP8Q6V1X1 898 aaPredicted RBP17.83■□□□□ 0.45
PTPN13-204ENST00000436978 GOLGA1Q92805 767 aa17.83■□□□□ 0.45
PTPN13-204ENST00000436978 XAGE2Q96GT9 111 aa17.83■□□□□ 0.45
PTPN13-204ENST00000436978 RGS22Q8NE09 1264 aa17.83■□□□□ 0.45
PTPN13-204ENST00000436978 LPIN2Q92539 896 aa17.83■□□□□ 0.45
PTPN13-204ENST00000436978 IL13P35225 146 aa17.83■□□□□ 0.44
PTPN13-204ENST00000436978 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.83■□□□□ 0.44
PTPN13-204ENST00000436978 PSMD1Q99460 953 aa17.83■□□□□ 0.44
PTPN13-204ENST00000436978 ANGEL1Q9UNK9 670 aaKnown RBP17.83■□□□□ 0.44
PTPN13-204ENST00000436978 ERVV-2B6SEH9 535 aa17.83■□□□□ 0.44
PTPN13-204ENST00000436978 SPHKAPQ2M3C7 1700 aa17.83■□□□□ 0.44
PTPN13-204ENST00000436978 NAP1L3Q99457 506 aaPredicted RBP17.83■□□□□ 0.44
PTPN13-204ENST00000436978 DNAJC25Q9H1X3 360 aa17.83■□□□□ 0.44
PTPN13-204ENST00000436978 TTC37Q6PGP7 1564 aa17.83■□□□□ 0.44
PTPN13-204ENST00000436978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.83■□□□□ 0.44
PTPN13-204ENST00000436978 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.44
PTPN13-204ENST00000436978 TMEM110-MUSTN1A8MSY1 372 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 FAM89AQ96GI7 184 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 CCT6AP40227 531 aaKnown RBP17.82■□□□□ 0.44
PTPN13-204ENST00000436978 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 TET3O43151 1660 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 ARID5AQ03989 594 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 SMC5Q8IY18 1101 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 FNBP1Q96RU3 617 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 PTGS1P23219 599 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 STRN3Q13033 797 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 DPH6Q7L8W6 267 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 MTUS1Q9ULD2 1270 aa17.82■□□□□ 0.44
PTPN13-204ENST00000436978 VWA3AA6NCI4 1184 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 CROCC2H7BZ55 1655 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 CARD14Q9BXL6 1004 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 DCAF17Q5H9S7 520 aaPredicted RBP17.81■□□□□ 0.44
PTPN13-204ENST00000436978 CCDC129Q6ZRS4 1044 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 GPCPD1Q9NPB8 672 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 INSRP06213 1382 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 CSRNP2Q9H175 543 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 TXNDC16Q9P2K2 825 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 USP26Q9BXU7 913 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.81■□□□□ 0.44
PTPN13-204ENST00000436978 RAB3IL1Q8TBN0 382 aa17.81■□□□□ 0.44
PTPN13-204ENST00000436978 SEL1L2Q5TEA6 688 aa17.8■□□□□ 0.44
PTPN13-204ENST00000436978 LUC7L2Q9Y383 392 aaKnown RBP17.8■□□□□ 0.44
PTPN13-204ENST00000436978 CDC42BPGQ6DT37 1551 aa17.8■□□□□ 0.44
PTPN13-204ENST00000436978 NOP56O00567 594 aaKnown RBP17.8■□□□□ 0.44
PTPN13-204ENST00000436978 LETM2Q2VYF4 491 aa17.8■□□□□ 0.44
PTPN13-204ENST00000436978 HAUS2Q9NVX0 235 aa17.8■□□□□ 0.44
PTPN13-204ENST00000436978 SLC27A2O14975 620 aa17.8■□□□□ 0.44
PTPN13-204ENST00000436978 STX10O60499 249 aa17.8■□□□□ 0.44
PTPN13-204ENST00000436978 TUBBP07437 444 aa17.8■□□□□ 0.44
PTPN13-204ENST00000436978 BLMP54132 1417 aaPredicted RBP17.8■□□□□ 0.44
PTPN13-204ENST00000436978 MTRF1LQ9UGC7 380 aaKnown RBP17.8■□□□□ 0.44
PTPN13-204ENST00000436978 JAG2Q9Y219 1238 aa17.8■□□□□ 0.44
PTPN13-204ENST00000436978 DHX37Q8IY37 1157 aaKnown RBP17.79■□□□□ 0.44
PTPN13-204ENST00000436978 CTNND2Q9UQB3 1225 aa17.79■□□□□ 0.44
PTPN13-204ENST00000436978 KIAA0232Q92628 1395 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms