RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 CERS5Q8N5B7 392 aa10.48□□□□□ -0.73
CDH13-203ENST00000431540 HELBQ8NG08 1087 aaPredicted RBP10.48□□□□□ -0.73
CDH13-203ENST00000431540 TSR2Q969E8 191 aaKnown RBP10.48□□□□□ -0.73
CDH13-203ENST00000431540 FBXW7Q969H0 707 aa10.48□□□□□ -0.73
CDH13-203ENST00000431540 MXD3Q9BW11 206 aa10.48□□□□□ -0.73
CDH13-203ENST00000431540 UTYO14607 1347 aa10.48□□□□□ -0.73
CDH13-203ENST00000431540 MROH5Q6ZUA9 1318 aa10.48□□□□□ -0.73
CDH13-203ENST00000431540 KIF16BQ96L93 1317 aa10.48□□□□□ -0.73
CDH13-203ENST00000431540 HIBADHP31937 336 aaKnown RBP10.47□□□□□ -0.73
CDH13-203ENST00000431540 GTF2A2P52657 109 aa10.47□□□□□ -0.73
CDH13-203ENST00000431540 RASA3Q14644 834 aa10.47□□□□□ -0.73
CDH13-203ENST00000431540 LMBR1LQ6UX01 489 aa10.47□□□□□ -0.73
CDH13-203ENST00000431540 OTOP1Q7RTM1 612 aa10.47□□□□□ -0.73
CDH13-203ENST00000431540 FAM83AQ86UY5 434 aa10.47□□□□□ -0.73
CDH13-203ENST00000431540 C9orf78Q9NZ63 289 aaPredicted RBP10.47□□□□□ -0.73
CDH13-203ENST00000431540 TAF5LO75529 589 aa10.46□□□□□ -0.73
CDH13-203ENST00000431540 MAP3K9P80192 1104 aa10.46□□□□□ -0.73
CDH13-203ENST00000431540 TAF7LQ5H9L4 462 aa10.46□□□□□ -0.73
CDH13-203ENST00000431540 Q6ZNB5 142 aa10.46□□□□□ -0.73
CDH13-203ENST00000431540 FBXO33Q7Z6M2 555 aa10.46□□□□□ -0.73
CDH13-203ENST00000431540 FAM84BQ96KN1 310 aaPredicted RBP10.46□□□□□ -0.73
CDH13-203ENST00000431540 EFCC1Q9HA90 598 aa10.46□□□□□ -0.73
CDH13-203ENST00000431540 CNNM1Q9NRU3 951 aa10.46□□□□□ -0.73
CDH13-203ENST00000431540 RIPOR2Q9Y4F9 1068 aa10.46□□□□□ -0.73
CDH13-203ENST00000431540 TRIM17Q9Y577 477 aa10.46□□□□□ -0.73
CDH13-203ENST00000431540 FANCIQ9NVI1 1328 aa10.46□□□□□ -0.73
CDH13-203ENST00000431540 OTOFQ9HC10 1997 aa10.45□□□□□ -0.74
CDH13-203ENST00000431540 AK9Q5TCS8 1911 aa10.45□□□□□ -0.74
CDH13-203ENST00000431540 MYH13Q9UKX3 1938 aa10.45□□□□□ -0.74
CDH13-203ENST00000431540 MAST3O60307 1309 aa10.45□□□□□ -0.74
CDH13-203ENST00000431540 IGF2BP3O00425 579 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDH13-203ENST00000431540 KLRK1P26718 216 aa10.45□□□□□ -0.74
CDH13-203ENST00000431540 CAVIN4Q5BKX8 364 aa10.45□□□□□ -0.74
CDH13-203ENST00000431540 MFSD14BQ5SR56 506 aa10.45□□□□□ -0.74
CDH13-203ENST00000431540 NBPF12Q5TAG4 269 aaPredicted RBP10.45□□□□□ -0.74
CDH13-203ENST00000431540 HHIPL2Q6UWX4 724 aa10.45□□□□□ -0.74
CDH13-203ENST00000431540 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
CDH13-203ENST00000431540 DZIP1LQ8IYY4 767 aaKnown RBP10.45□□□□□ -0.74
CDH13-203ENST00000431540 SRCIN1Q9C0H9 1055 aa10.45□□□□□ -0.74
CDH13-203ENST00000431540 ZFYVE28Q9HCC9 887 aa10.45□□□□□ -0.74
CDH13-203ENST00000431540 ZNF70Q9UC06 446 aaPredicted RBP10.45□□□□□ -0.74
CDH13-203ENST00000431540 CETPP11597 493 aa10.44□□□□□ -0.74
CDH13-203ENST00000431540 RBM5P52756 815 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH13-203ENST00000431540 EXOSC9Q06265 439 aaKnown RBP10.44□□□□□ -0.74
CDH13-203ENST00000431540 RABL6Q3YEC7 729 aaPredicted RBP10.44□□□□□ -0.74
CDH13-203ENST00000431540 ERO1BQ86YB8 467 aa10.44□□□□□ -0.74
CDH13-203ENST00000431540 TEPSINQ96N21 525 aa10.44□□□□□ -0.74
CDH13-203ENST00000431540 R3HDMLQ9H3Y0 253 aa10.44□□□□□ -0.74
CDH13-203ENST00000431540 TTF2Q9UNY4 1162 aaKnown RBP10.44□□□□□ -0.74
CDH13-203ENST00000431540 SCAF8Q9UPN6 1271 aaKnown RBP10.44□□□□□ -0.74
CDH13-203ENST00000431540 HDAC5Q9UQL6 1122 aa10.44□□□□□ -0.74
CDH13-203ENST00000431540 CSADQ9Y600 493 aa10.44□□□□□ -0.74
CDH13-203ENST00000431540 SSC5DA1L4H1 1573 aa10.43□□□□□ -0.74
CDH13-203ENST00000431540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.43□□□□□ -0.74
CDH13-203ENST00000431540 PDE8BO95263 885 aa10.43□□□□□ -0.74
CDH13-203ENST00000431540 CRHR2Q13324 411 aa10.43□□□□□ -0.74
CDH13-203ENST00000431540 PRKG1Q13976 671 aa10.43□□□□□ -0.74
CDH13-203ENST00000431540 KIF22Q14807 665 aa10.43□□□□□ -0.74
CDH13-203ENST00000431540 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.43□□□□□ -0.74
CDH13-203ENST00000431540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDH13-203ENST00000431540 ZFP91Q96JP5 570 aaPredicted RBP10.43□□□□□ -0.74
CDH13-203ENST00000431540 CLMNQ96JQ2 1002 aa10.43□□□□□ -0.74
CDH13-203ENST00000431540 ZDHHC15Q96MV8 337 aa10.43□□□□□ -0.74
CDH13-203ENST00000431540 PTPN18Q99952 460 aa10.43□□□□□ -0.74
CDH13-203ENST00000431540 VEZTQ9HBM0 779 aa10.43□□□□□ -0.74
CDH13-203ENST00000431540 RPAP1Q9BWH6 1393 aaPredicted RBP10.42□□□□□ -0.74
CDH13-203ENST00000431540 PTPRCP08575 1304 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 HTTP42858 3142 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 SPDYE5A6NIY4 337 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 TLR2O60603 784 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 CRKP46108 304 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 PPATQ06203 517 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 DCAF15Q66K64 600 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 VPS37DQ86XT2 251 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 FBXO22Q8NEZ5 403 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 TEKT1Q969V4 418 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 OPTNQ96CV9 577 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 TMOD2Q9NZR1 351 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 CHMP3Q9Y3E7 222 aa10.42□□□□□ -0.74
CDH13-203ENST00000431540 CENPFP49454 3210 aa10.41□□□□□ -0.74
CDH13-203ENST00000431540 CLRN2A0PK11 232 aa10.41□□□□□ -0.74
CDH13-203ENST00000431540 HOXD10P28358 340 aa10.41□□□□□ -0.74
CDH13-203ENST00000431540 GJA5P36382 358 aa10.41□□□□□ -0.74
CDH13-203ENST00000431540 EPHA10Q5JZY3 1008 aa10.41□□□□□ -0.74
CDH13-203ENST00000431540 NKX2-3Q8TAU0 364 aa10.41□□□□□ -0.74
CDH13-203ENST00000431540 WDR66Q8TBY9 1149 aa10.41□□□□□ -0.74
CDH13-203ENST00000431540 ZNF333Q96JL9 665 aa10.41□□□□□ -0.74
CDH13-203ENST00000431540 TDRD3Q9H7E2 651 aaKnown RBP10.41□□□□□ -0.74
CDH13-203ENST00000431540 CEP290O15078 2479 aa10.41□□□□□ -0.74
CDH13-203ENST00000431540 MGAMO43451 1857 aa10.4□□□□□ -0.74
CDH13-203ENST00000431540 CCL15-CCL14A0A0B4J2E2 113 aa10.4□□□□□ -0.74
CDH13-203ENST00000431540 F6X3S4 739 aa10.4□□□□□ -0.74
CDH13-203ENST00000431540 F8W031 263 aaPredicted RBP10.4□□□□□ -0.74
CDH13-203ENST00000431540 ANP32CO43423 234 aa10.4□□□□□ -0.74
CDH13-203ENST00000431540 PPIL2Q13356 520 aa10.4□□□□□ -0.74
CDH13-203ENST00000431540 SNAPC2Q13487 334 aa10.4□□□□□ -0.74
CDH13-203ENST00000431540 TAF1CQ15572 869 aaPredicted RBP10.4□□□□□ -0.74
CDH13-203ENST00000431540 CCL15Q16663 113 aa10.4□□□□□ -0.74
CDH13-203ENST00000431540 HABP4Q5JVS0 413 aaKnown RBP10.4□□□□□ -0.74
CDH13-203ENST00000431540 CD99L2Q8TCZ2 262 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms