RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 KRT85P78386 507 aa12.87□□□□□ -0.35
HIPK2-203ENST00000428878 IARSP41252 1262 aaKnown RBP12.87□□□□□ -0.35
HIPK2-203ENST00000428878 DHX8Q14562 1220 aaKnown RBP12.87□□□□□ -0.35
HIPK2-203ENST00000428878 DNTTIP2Q5QJE6 756 aaKnown RBP12.87□□□□□ -0.35
HIPK2-203ENST00000428878 IFIT1BQ5T764 474 aaKnown RBP12.87□□□□□ -0.35
HIPK2-203ENST00000428878 GADD45BO75293 160 aaPredicted RBP12.86□□□□□ -0.35
HIPK2-203ENST00000428878 GOLGA8HP0CJ92 632 aa12.86□□□□□ -0.35
HIPK2-203ENST00000428878 ADD2P35612 726 aa12.86□□□□□ -0.35
HIPK2-203ENST00000428878 MECOMQ03112 1051 aa12.86□□□□□ -0.35
HIPK2-203ENST00000428878 USP48Q86UV5 1035 aa12.86□□□□□ -0.35
HIPK2-203ENST00000428878 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.354e-8■□□□□ 10.4
HIPK2-203ENST00000428878 BSDC1Q9NW68 430 aaPredicted RBP12.86□□□□□ -0.35
HIPK2-203ENST00000428878 COL18A1P39060 1754 aa12.86□□□□□ -0.35
HIPK2-203ENST00000428878 NMT2O60551 498 aa12.86□□□□□ -0.35
HIPK2-203ENST00000428878 SYAP1Q96A49 352 aaPredicted RBP12.86□□□□□ -0.35
HIPK2-203ENST00000428878 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
HIPK2-203ENST00000428878 SH2B1Q9NRF2 756 aaPredicted RBP12.86□□□□□ -0.35
HIPK2-203ENST00000428878 STOX1Q6ZVD7 989 aa12.86□□□□□ -0.35
HIPK2-203ENST00000428878 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
HIPK2-203ENST00000428878 BIN1O00499 593 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 GRAPQ13588 217 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 NECTIN1Q15223 517 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 GRAPLQ8TC17 118 aaPredicted RBP12.85□□□□□ -0.35
HIPK2-203ENST00000428878 ANO8Q9HCE9 1232 aaPredicted RBP12.85□□□□□ -0.35
HIPK2-203ENST00000428878 PES1O00541 588 aaKnown RBP12.85□□□□□ -0.35
HIPK2-203ENST00000428878 IL27Q8NEV9 243 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 ALG1Q9BT22 464 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 KCNJ14Q9UNX9 436 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 UTYO14607 1347 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 ADAMTS7Q9UKP4 1686 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 VIRMAQ69YN4 1812 aaKnown RBP12.85□□□□□ -0.35
HIPK2-203ENST00000428878 SLURP2P0DP57 97 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
HIPK2-203ENST00000428878 SPECC1Q5M775 1068 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 GIMAP6Q6P9H5 292 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 CCDC73Q6ZRK6 1079 aa12.85□□□□□ -0.35
HIPK2-203ENST00000428878 CTCFLQ8NI51 663 aaPredicted RBP12.85□□□□□ -0.35
HIPK2-203ENST00000428878 POLD1P28340 1107 aa12.84□□□□□ -0.35
HIPK2-203ENST00000428878 UBE4AQ14139 1066 aa12.84□□□□□ -0.35
HIPK2-203ENST00000428878 ESR2Q92731 530 aa12.84□□□□□ -0.35
HIPK2-203ENST00000428878 FAM208AQ9UK61 1670 aaKnown RBP12.84□□□□□ -0.35
HIPK2-203ENST00000428878 ZNF609O15014 1411 aa12.84□□□□□ -0.35
HIPK2-203ENST00000428878 RAB3GAP1Q15042 981 aa12.84□□□□□ -0.35
HIPK2-203ENST00000428878 SPTY2D1Q68D10 685 aaPredicted RBP12.84□□□□□ -0.35
HIPK2-203ENST00000428878 BAZ2BQ9UIF8 2168 aaKnown RBP12.84□□□□□ -0.35
HIPK2-203ENST00000428878 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
HIPK2-203ENST00000428878 BTDP43251 543 aa12.84□□□□□ -0.35
HIPK2-203ENST00000428878 PDE4BQ07343 736 aa12.84□□□□□ -0.35
HIPK2-203ENST00000428878 AOC3Q16853 763 aa12.84□□□□□ -0.35
HIPK2-203ENST00000428878 ZNF277Q9NRM2 450 aaPredicted RBP12.84□□□□□ -0.35
HIPK2-203ENST00000428878 CDHR2Q9BYE9 1310 aa12.83□□□□□ -0.35
HIPK2-203ENST00000428878 TCP10L2B9ZVM9 353 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 LDHCP07864 332 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 DDR1Q08345 913 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 TBC1D10CQ8IV04 446 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
HIPK2-203ENST00000428878 TFAP4Q01664 338 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 HSP90AA4PQ58FG1 418 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 KAT14Q9H8E8 782 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 SENP2Q9HC62 589 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 XDHP47989 1333 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 PPARAQ07869 468 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 RTN1Q16799 776 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 CLEC10AQ8IUN9 316 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 ZSWIM6Q9HCJ5 1215 aa12.83□□□□□ -0.36
HIPK2-203ENST00000428878 SALL3Q9BXA9 1300 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 A0A087WWV3 80 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 PATL2C9JE40 543 aaKnown RBP12.82□□□□□ -0.36
HIPK2-203ENST00000428878 EVX2Q03828 476 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 SCRN1Q12765 414 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 L1TD1Q5T7N2 865 aaKnown RBP12.82□□□□□ -0.36
HIPK2-203ENST00000428878 OGFOD1Q8N543 542 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 RNF41Q9H4P4 317 aaPredicted RBP12.82□□□□□ -0.36
HIPK2-203ENST00000428878 KCNQ5Q9NR82 932 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 USP40Q9NVE5 1235 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 TMOD2Q9NZR1 351 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 BCL9LQ86UU0 1499 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 SSRP1Q08945 709 aaKnown RBP12.82□□□□□ -0.36
HIPK2-203ENST00000428878 GPCPD1Q9NPB8 672 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
HIPK2-203ENST00000428878 CLSTN1O94985 981 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 F13A1P00488 732 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 PDE6BP35913 854 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 SPC24Q8NBT2 197 aa12.82□□□□□ -0.36
HIPK2-203ENST00000428878 V9GY48 417 aaPredicted RBP12.82□□□□□ -0.36
HIPK2-203ENST00000428878 N4BP2Q86UW6 1770 aaPredicted RBP12.82□□□□□ -0.36
HIPK2-203ENST00000428878 CSPP1Q1MSJ5 1256 aa12.81□□□□□ -0.36
HIPK2-203ENST00000428878 SKOR2Q2VWA4 1001 aaPredicted RBP12.81□□□□□ -0.36
HIPK2-203ENST00000428878 NRAPQ86VF7 1730 aa12.81□□□□□ -0.36
HIPK2-203ENST00000428878 STRBPQ96SI9 672 aaKnown RBP12.81□□□□□ -0.36
HIPK2-203ENST00000428878 ZSWIM5Q9P217 1185 aa12.81□□□□□ -0.36
HIPK2-203ENST00000428878 BECN2A8MW95 431 aa12.81□□□□□ -0.36
HIPK2-203ENST00000428878 UBE2Q2LH0YL09 131 aa12.81□□□□□ -0.36
HIPK2-203ENST00000428878 SH3RF3Q8TEJ3 882 aaPredicted RBP12.81□□□□□ -0.36
HIPK2-203ENST00000428878 JDP2Q8WYK2 163 aa12.81□□□□□ -0.36
HIPK2-203ENST00000428878 GPR108Q9NPR9 543 aa12.81□□□□□ -0.36
HIPK2-203ENST00000428878 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
HIPK2-203ENST00000428878 AKNAD1Q5T1N1 836 aa12.81□□□□□ -0.36
HIPK2-203ENST00000428878 HEATR3Q7Z4Q2 680 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms