RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 PLA2G4AP47712 749 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 KLHL10Q6JEL2 608 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 HDXQ7Z353 690 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 RASSF4Q9H2L5 321 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 IDH1O75874 414 aaKnown RBP12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 RFX5P48382 616 aaPredicted RBP12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 TUBB2AQ13885 445 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 TUBB2BQ9BVA1 445 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 TRIM34Q9BYJ4 488 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 C19orf44Q9H6X5 657 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 LZTFL1Q9NQ48 299 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 TUBBP07437 444 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 ADKP55263 362 aaKnown RBP12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 TMEM67Q5HYA8 995 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 SETD1AO15047 1707 aaKnown RBP12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 CCDC151A5D8V7 595 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 GOLGA8FQ08AF8 430 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 GOLGA8DPQ0D2H9 430 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 STK11IPQ8N1F8 1099 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 IFIT3O14879 490 aaKnown RBP12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 IPO7O95373 1038 aaKnown RBP12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 CAPN2P17655 700 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 TXLNAP40222 546 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 PDIA6Q15084 440 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 OSBP2Q969R2 916 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 PARD6BQ9BYG5 372 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 RAI14Q9P0K7 980 aa12.3□□□□□ -0.44
ATP2C1-204ENST00000428331 PES1O00541 588 aaKnown RBP12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 NCAPHQ15003 741 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 CTAGE1Q96RT6 745 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 ZBTB3Q9H5J0 574 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 PUF60Q9UHX1 559 aaKnown RBP12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 TUBE1Q9UJT0 475 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 CTAGE9A4FU28 777 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 ZBTB22O15209 634 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 RXRAP19793 462 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 CCDC70Q6NSX1 233 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 GJB4Q9NTQ9 266 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 VPS18Q9P253 973 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 SALL1Q9NSC2 1324 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 DIP2AQ14689 1571 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 VGLL3A8MV65 326 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 GPAA1O43292 621 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 POSTNQ15063 836 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 AXDND1Q5T1B0 1012 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 ANKLE2Q86XL3 938 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 DPF2Q92785 391 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 AIDAQ96BJ3 306 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 CCDC196A0A1B0GTZ2 297 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 CTAGE15A4D2H0 777 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 M0R2C6 588 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 CTAGE8P0CG41 777 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 LONRF2Q1L5Z9 754 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 RRP12Q5JTH9 1297 aaKnown RBP12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 METTL24Q5JXM2 366 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 CTAGE6Q86UF2 777 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 CTAGE4Q8IX94 777 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 EXOC4Q96A65 974 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 ZNF594Q96JF6 807 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 TMEM87BQ96K49 555 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 CLIC6Q96NY7 704 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 CCDC85AQ96PX6 553 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 PARP3Q9Y6F1 533 aa12.29□□□□□ -0.44
ATP2C1-204ENST00000428331 TUBGCP6Q96RT7 1819 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 ZNF569Q5MCW4 686 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 LRRN4CLQ8ND94 238 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 ZMYM6O95789 1325 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 FMN2Q9NZ56 1722 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 TTF1Q15361 905 aaPredicted RBP12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 HSP90AB3PQ58FF7 597 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 C10orf67Q8IYJ2 551 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 PHKBQ93100 1093 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 COL15A1P39059 1388 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 WDHD1O75717 1129 aaPredicted RBP12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 PIP4K2BP78356 416 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 REXO1L1PQ8IX06 675 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 GOLGA5Q8TBA6 731 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 DESI2Q9BSY9 194 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 TSPOAP1O95153 1857 aa12.28□□□□□ -0.44
ATP2C1-204ENST00000428331 POLR2DO15514 142 aaKnown RBP12.27□□□□□ -0.44
ATP2C1-204ENST00000428331 ZRANB2O95218 330 aaKnown RBP eCLIP12.27□□□□□ -0.443e-6■■■■■ 27.8
ATP2C1-204ENST00000428331 NAA15Q9BXJ9 866 aaKnown RBP12.27□□□□□ -0.44
ATP2C1-204ENST00000428331 ZCCHC17Q9NP64 241 aaKnown RBP12.27□□□□□ -0.44
ATP2C1-204ENST00000428331 FAM53CQ9NYF3 392 aa12.27□□□□□ -0.44
ATP2C1-204ENST00000428331 PTPN21Q16825 1174 aa12.27□□□□□ -0.44
ATP2C1-204ENST00000428331 LRRC24Q50LG9 513 aa12.27□□□□□ -0.44
ATP2C1-204ENST00000428331 RILPL1Q5EBL4 403 aa12.27□□□□□ -0.44
ATP2C1-204ENST00000428331 SLC9C2Q5TAH2 1124 aa12.27□□□□□ -0.44
ATP2C1-204ENST00000428331 SRGAP1Q7Z6B7 1085 aa12.27□□□□□ -0.44
ATP2C1-204ENST00000428331 XAGE2Q96GT9 111 aa12.27□□□□□ -0.44
ATP2C1-204ENST00000428331 NAPBQ9H115 298 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms