RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 NF2P35240 595 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 B4GALNT4Q76KP1 1039 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 TEX11Q8IYF3 940 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 ZKSCAN4Q969J2 545 aaPredicted RBP18.34■□□□□ 0.53
C9orf3-206ENST00000428313 SIL1Q9H173 461 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 C19orf44Q9H6X5 657 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 CAPN7Q9Y6W3 813 aa18.34■□□□□ 0.53
C9orf3-206ENST00000428313 A6NNZ2 444 aa18.33■□□□□ 0.53
C9orf3-206ENST00000428313 EIF3HO15372 352 aaKnown RBP eCLIP18.33■□□□□ 0.53
C9orf3-206ENST00000428313 CTDNEP1O95476 244 aa18.33■□□□□ 0.53
C9orf3-206ENST00000428313 CMA1P23946 247 aa18.33■□□□□ 0.53
C9orf3-206ENST00000428313 MRPL12P52815 198 aaKnown RBP18.33■□□□□ 0.53
C9orf3-206ENST00000428313 IRX1P78414 480 aaPredicted RBP18.33■□□□□ 0.53
C9orf3-206ENST00000428313 TUBB8Q3ZCM7 444 aa18.33■□□□□ 0.53
C9orf3-206ENST00000428313 WLSQ5T9L3 541 aa18.33■□□□□ 0.53
C9orf3-206ENST00000428313 OLFM4Q6UX06 510 aa18.33■□□□□ 0.53
C9orf3-206ENST00000428313 COG1Q8WTW3 980 aa18.33■□□□□ 0.53
C9orf3-206ENST00000428313 IRX2Q9BZI1 471 aaPredicted RBP18.33■□□□□ 0.53
C9orf3-206ENST00000428313 ADGRG1Q9Y653 693 aa18.33■□□□□ 0.53
C9orf3-206ENST00000428313 RIMBP3CA6NJZ7 1639 aa18.33■□□□□ 0.52
C9orf3-206ENST00000428313 RIMBP3BA6NNM3 1639 aa18.33■□□□□ 0.52
C9orf3-206ENST00000428313 RIMBP3Q9UFD9 1639 aa18.33■□□□□ 0.52
C9orf3-206ENST00000428313 STIM1Q13586 685 aa18.33■□□□□ 0.52
C9orf3-206ENST00000428313 CRYMQ14894 314 aa18.33■□□□□ 0.52
C9orf3-206ENST00000428313 CCDC148Q8NFR7 591 aa18.33■□□□□ 0.52
C9orf3-206ENST00000428313 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.33■□□□□ 0.52
C9orf3-206ENST00000428313 C3P01024 1663 aa18.32■□□□□ 0.52
C9orf3-206ENST00000428313 SPTLC2O15270 562 aa18.32■□□□□ 0.52
C9orf3-206ENST00000428313 ADKP55263 362 aaKnown RBP18.32■□□□□ 0.52
C9orf3-206ENST00000428313 BCAS4Q8TDM0 211 aa18.32■□□□□ 0.52
C9orf3-206ENST00000428313 NAPGQ99747 312 aaPredicted RBP18.32■□□□□ 0.52
C9orf3-206ENST00000428313 FANCLQ9NW38 375 aa18.32■□□□□ 0.52
C9orf3-206ENST00000428313 CEMIPQ8WUJ3 1361 aa18.32■□□□□ 0.52
C9orf3-206ENST00000428313 ZNF569Q5MCW4 686 aa18.32■□□□□ 0.52
C9orf3-206ENST00000428313 RNF217Q8TC41 542 aa18.32■□□□□ 0.52
C9orf3-206ENST00000428313 N4BP2L2Q92802 583 aaPredicted RBP18.32■□□□□ 0.52
C9orf3-206ENST00000428313 CAPS2Q9BXY5 557 aa18.32■□□□□ 0.52
C9orf3-206ENST00000428313 LZTFL1Q9NQ48 299 aa18.32■□□□□ 0.52
C9orf3-206ENST00000428313 MYO1AQ9UBC5 1043 aa18.32■□□□□ 0.52
C9orf3-206ENST00000428313 TAF5LO75529 589 aa18.31■□□□□ 0.52
C9orf3-206ENST00000428313 PFKFB1P16118 471 aa18.31■□□□□ 0.52
C9orf3-206ENST00000428313 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
C9orf3-206ENST00000428313 GRIN2DO15399 1336 aa18.31■□□□□ 0.52
C9orf3-206ENST00000428313 AKAP12Q02952 1782 aa18.3■□□□□ 0.52
C9orf3-206ENST00000428313 GOLGA6CA6NDK9 693 aa18.3■□□□□ 0.52
C9orf3-206ENST00000428313 GOLGA6DP0CG33 693 aa18.3■□□□□ 0.52
C9orf3-206ENST00000428313 ARHGAP25P42331 645 aa18.3■□□□□ 0.52
C9orf3-206ENST00000428313 GOLGA6AQ9NYA3 693 aa18.3■□□□□ 0.52
C9orf3-206ENST00000428313 TARSL2A2RTX5 802 aaKnown RBP18.3■□□□□ 0.52
C9orf3-206ENST00000428313 H0YHG0 523 aa18.3■□□□□ 0.52
C9orf3-206ENST00000428313 KIAA0754O94854 1291 aa18.3■□□□□ 0.52
C9orf3-206ENST00000428313 FOSBP53539 338 aa18.3■□□□□ 0.52
C9orf3-206ENST00000428313 USP14P54578 494 aa18.3■□□□□ 0.52
C9orf3-206ENST00000428313 YTHDF3Q7Z739 585 aaKnown RBP18.3■□□□□ 0.52
C9orf3-206ENST00000428313 NCAPD2Q15021 1401 aa18.3■□□□□ 0.52
C9orf3-206ENST00000428313 HMGB1P09429 215 aaKnown RBP18.29■□□□□ 0.52
C9orf3-206ENST00000428313 TRHP20396 242 aaPredicted RBP18.29■□□□□ 0.52
C9orf3-206ENST00000428313 CPS1P31327 1500 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 PLCB4Q15147 1175 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 SKIDA1Q1XH10 827 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 RASGRP2Q7LDG7 609 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 NOA1Q8NC60 698 aaKnown RBP18.29■□□□□ 0.52
C9orf3-206ENST00000428313 PAGR1Q9BTK6 254 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 ODF2LQ9ULJ1 636 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 TTF2Q9UNY4 1162 aaKnown RBP18.29■□□□□ 0.52
C9orf3-206ENST00000428313 LAMA4Q16363 1823 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 KDM6AO15550 1401 aaPredicted RBP18.29■□□□□ 0.52
C9orf3-206ENST00000428313 AKR1B15C9JRZ8 316 aaPredicted RBP18.29■□□□□ 0.52
C9orf3-206ENST00000428313 GGCXP38435 758 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 OTUD6BQ8N6M0 293 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 CRACR2AQ9BSW2 395 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 FSD1Q9BTV5 496 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 CLIC4Q9Y696 253 aa18.29■□□□□ 0.52
C9orf3-206ENST00000428313 KLHL33A6NCF5 533 aa18.28■□□□□ 0.52
C9orf3-206ENST00000428313 MTF1Q14872 753 aa18.28■□□□□ 0.52
C9orf3-206ENST00000428313 SLC35F6Q8N357 371 aa18.28■□□□□ 0.52
C9orf3-206ENST00000428313 U3KPZ7 1027 aaPredicted RBP18.28■□□□□ 0.52
C9orf3-206ENST00000428313 CARMIL3Q8ND23 1372 aa18.28■□□□□ 0.52
C9orf3-206ENST00000428313 SOWAHDA6NJG2 315 aa18.28■□□□□ 0.52
C9orf3-206ENST00000428313 MYO1FO00160 1098 aa18.28■□□□□ 0.52
C9orf3-206ENST00000428313 MEFVO15553 781 aaPredicted RBP18.28■□□□□ 0.52
C9orf3-206ENST00000428313 AMPD2Q01433 879 aa18.28■□□□□ 0.52
C9orf3-206ENST00000428313 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
C9orf3-206ENST00000428313 ZNF589Q86UQ0 364 aaPredicted RBP18.28■□□□□ 0.52
C9orf3-206ENST00000428313 SH3GL2Q99962 352 aa18.28■□□□□ 0.52
C9orf3-206ENST00000428313 NBPF7P0C2Y1 421 aaPredicted RBP18.27■□□□□ 0.52
C9orf3-206ENST00000428313 ZNF18P17022 549 aa18.27■□□□□ 0.52
C9orf3-206ENST00000428313 PTPN21Q16825 1174 aa18.27■□□□□ 0.52
C9orf3-206ENST00000428313 RAD9BQ6WBX8 426 aa18.27■□□□□ 0.52
C9orf3-206ENST00000428313 AACSQ86V21 672 aa18.27■□□□□ 0.52
C9orf3-206ENST00000428313 IQCA1Q86XH1 822 aa18.27■□□□□ 0.52
C9orf3-206ENST00000428313 CD248Q9HCU0 757 aa18.27■□□□□ 0.52
C9orf3-206ENST00000428313 MED1Q15648 1581 aaPredicted RBP18.27■□□□□ 0.51
C9orf3-206ENST00000428313 AGPSO00116 658 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 NEBLO76041 1014 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 SMTNP53814 917 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 MICALCLQ6ZW33 695 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 AGXT2Q9BYV1 514 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 GOLGA8KD6RF30 607 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 SYKP43405 635 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms