RNA–Protein interactions for RNA: ENST00000428120.5

FAAP20-209, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,313 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-209ENST00000428120 UBE2HP62256 183 aa27.25■■□□□ 1.95
FAAP20-209ENST00000428120 KRT85P78386 507 aa27.25■■□□□ 1.95
FAAP20-209ENST00000428120 RIOK1Q9BRS2 568 aaKnown RBP27.25■■□□□ 1.95
FAAP20-209ENST00000428120 TOMM22Q9NS69 142 aa27.25■■□□□ 1.95
FAAP20-209ENST00000428120 SH2B2O14492 632 aaPredicted RBP27.24■■□□□ 1.95
FAAP20-209ENST00000428120 RXRAP19793 462 aa27.24■■□□□ 1.95
FAAP20-209ENST00000428120 PRDX5P30044 214 aa27.24■■□□□ 1.95
FAAP20-209ENST00000428120 RRP12Q5JTH9 1297 aaKnown RBP27.24■■□□□ 1.95
FAAP20-209ENST00000428120 AKNAD1Q5T1N1 836 aa27.24■■□□□ 1.95
FAAP20-209ENST00000428120 CHD4Q14839 1912 aa27.24■■□□□ 1.95
FAAP20-209ENST00000428120 IRS2Q9Y4H2 1338 aa27.24■■□□□ 1.95
FAAP20-209ENST00000428120 GUCY1B3Q02153 619 aa27.24■■□□□ 1.95
FAAP20-209ENST00000428120 MECOMQ03112 1051 aa27.24■■□□□ 1.95
FAAP20-209ENST00000428120 SMIM22K7EJ46 135 aa27.23■■□□□ 1.95
FAAP20-209ENST00000428120 FDPSP14324 419 aaKnown RBP27.23■■□□□ 1.95
FAAP20-209ENST00000428120 RESTQ13127 1097 aa27.23■■□□□ 1.95
FAAP20-209ENST00000428120 ZNF827Q17R98 1081 aa27.23■■□□□ 1.95
FAAP20-209ENST00000428120 ZNF772Q68DY9 489 aaPredicted RBP27.23■■□□□ 1.95
FAAP20-209ENST00000428120 MFSD6Q6ZSS7 791 aa27.23■■□□□ 1.95
FAAP20-209ENST00000428120 TTC6Q86TZ1 520 aa27.23■■□□□ 1.95
FAAP20-209ENST00000428120 NSUN4Q96CB9 384 aaKnown RBP27.23■■□□□ 1.95
FAAP20-209ENST00000428120 ZSWIM5Q9P217 1185 aa27.23■■□□□ 1.95
FAAP20-209ENST00000428120 CRY2Q49AN0 593 aa27.23■■□□□ 1.95
FAAP20-209ENST00000428120 MINDY4BA8MYZ0 360 aa27.22■■□□□ 1.95
FAAP20-209ENST00000428120 POLRMTO00411 1230 aaKnown RBP27.22■■□□□ 1.95
FAAP20-209ENST00000428120 APBA3O96018 575 aa27.22■■□□□ 1.95
FAAP20-209ENST00000428120 CSPP1Q1MSJ5 1256 aa27.22■■□□□ 1.95
FAAP20-209ENST00000428120 XDHP47989 1333 aa27.21■■□□□ 1.95
FAAP20-209ENST00000428120 TMEM67Q5HYA8 995 aa27.21■■□□□ 1.95
FAAP20-209ENST00000428120 IGDCC4Q8TDY8 1250 aa27.21■■□□□ 1.95
FAAP20-209ENST00000428120 KIF3AQ9Y496 699 aa27.21■■□□□ 1.95
FAAP20-209ENST00000428120 CPLX1O14810 134 aa27.21■■□□□ 1.95
FAAP20-209ENST00000428120 PPARAQ07869 468 aa27.21■■□□□ 1.95
FAAP20-209ENST00000428120 CCDC144CPQ8IYA2 1237 aa27.21■■□□□ 1.95
FAAP20-209ENST00000428120 GPSM2P81274 684 aa27.2■■□□□ 1.94
FAAP20-209ENST00000428120 NFXL1Q6ZNB6 911 aa27.2■■□□□ 1.94
FAAP20-209ENST00000428120 MICU3Q86XE3 530 aa27.2■■□□□ 1.94
FAAP20-209ENST00000428120 STAG1Q8WVM7 1258 aa27.2■■□□□ 1.94
FAAP20-209ENST00000428120 SYAP1Q96A49 352 aaPredicted RBP27.2■■□□□ 1.94
FAAP20-209ENST00000428120 ZKSCAN3Q9BRR0 538 aa27.2■■□□□ 1.94
FAAP20-209ENST00000428120 LY9Q9HBG7 655 aa27.2■■□□□ 1.94
FAAP20-209ENST00000428120 DHX16O60231 1041 aaKnown RBP27.19■■□□□ 1.94
FAAP20-209ENST00000428120 TMEM87BQ96K49 555 aa27.19■■□□□ 1.94
FAAP20-209ENST00000428120 MYL10Q9BUA6 226 aa27.19■■□□□ 1.94
FAAP20-209ENST00000428120 CNNM2Q9H8M5 875 aa27.19■■□□□ 1.94
FAAP20-209ENST00000428120 AATFQ9NY61 560 aaKnown RBP eCLIP27.19■■□□□ 1.94
FAAP20-209ENST00000428120 LEMD3Q9Y2U8 911 aa27.19■■□□□ 1.94
FAAP20-209ENST00000428120 CYP2D7A0A087X1C5 515 aa27.19■■□□□ 1.94
FAAP20-209ENST00000428120 IFIT3O14879 490 aaKnown RBP27.19■■□□□ 1.94
FAAP20-209ENST00000428120 APOA5Q6Q788 366 aa27.19■■□□□ 1.94
FAAP20-209ENST00000428120 PDS5AQ29RF7 1337 aaKnown RBP27.19■■□□□ 1.94
FAAP20-209ENST00000428120 TIAM2Q8IVF5 1701 aa27.19■■□□□ 1.94
FAAP20-209ENST00000428120 LRSAM1Q6UWE0 723 aa27.18■■□□□ 1.94
FAAP20-209ENST00000428120 CHMP4CQ96CF2 233 aa27.18■■□□□ 1.94
FAAP20-209ENST00000428120 KRT23Q9C075 422 aa27.18■■□□□ 1.94
FAAP20-209ENST00000428120 BAZ2AQ9UIF9 1905 aaKnown RBP27.18■■□□□ 1.94
FAAP20-209ENST00000428120 ADD1P35611 737 aaKnown RBP27.18■■□□□ 1.94
FAAP20-209ENST00000428120 METAP2P50579 478 aaKnown RBP eCLIP27.18■■□□□ 1.94
FAAP20-209ENST00000428120 OTUD7BQ6GQQ9 843 aa27.18■■□□□ 1.94
FAAP20-209ENST00000428120 RBM17Q96I25 401 aaKnown RBP27.18■■□□□ 1.94
FAAP20-209ENST00000428120 GOLGB1Q14789 3259 aaKnown RBP27.17■■□□□ 1.94
FAAP20-209ENST00000428120 SPATA32Q96LK8 384 aa27.17■■□□□ 1.94
FAAP20-209ENST00000428120 RBSNQ9H1K0 784 aa27.17■■□□□ 1.94
FAAP20-209ENST00000428120 ZSCAN16Q9H4T2 348 aaPredicted RBP27.17■■□□□ 1.94
FAAP20-209ENST00000428120 ORC3Q9UBD5 711 aaPredicted RBP27.17■■□□□ 1.94
FAAP20-209ENST00000428120 UFL1O94874 794 aa27.16■■□□□ 1.94
FAAP20-209ENST00000428120 TAOK2Q9UL54 1235 aa27.16■■□□□ 1.94
FAAP20-209ENST00000428120 CEBPZQ03701 1054 aaKnown RBP27.16■■□□□ 1.94
FAAP20-209ENST00000428120 COL23A1Q86Y22 540 aaPredicted RBP27.16■■□□□ 1.94
FAAP20-209ENST00000428120 LEO1Q8WVC0 666 aaPredicted RBP27.16■■□□□ 1.94
FAAP20-209ENST00000428120 SCAND2PQ9GZW5 306 aaPredicted RBP27.16■■□□□ 1.94
FAAP20-209ENST00000428120 GJB4Q9NTQ9 266 aa27.16■■□□□ 1.94
FAAP20-209ENST00000428120 CDC27P30260 824 aa27.15■■□□□ 1.94
FAAP20-209ENST00000428120 NASPP49321 788 aaPredicted RBP27.15■■□□□ 1.94
FAAP20-209ENST00000428120 ZBTB43O43298 467 aa27.15■■□□□ 1.94
FAAP20-209ENST00000428120 DZIP1Q86YF9 867 aaKnown RBP27.15■■□□□ 1.94
FAAP20-209ENST00000428120 PLSCR1O15162 318 aa27.14■■□□□ 1.94
FAAP20-209ENST00000428120 EVX2Q03828 476 aa27.14■■□□□ 1.94
FAAP20-209ENST00000428120 FTOQ9C0B1 505 aaKnown RBP eCLIP27.14■■□□□ 1.941e-15■□□□□ 8.7
FAAP20-209ENST00000428120 CCDC183Q5T5S1 534 aa27.13■■□□□ 1.93
FAAP20-209ENST00000428120 ZNF804AQ7Z570 1209 aa27.13■■□□□ 1.93
FAAP20-209ENST00000428120 SGMS1Q86VZ5 419 aa27.13■■□□□ 1.93
FAAP20-209ENST00000428120 AKT1S1Q96B36 256 aa27.13■■□□□ 1.93
FAAP20-209ENST00000428120 RNF41Q9H4P4 317 aaPredicted RBP27.13■■□□□ 1.93
FAAP20-209ENST00000428120 ELP1O95163 1332 aa27.13■■□□□ 1.93
FAAP20-209ENST00000428120 TDRD7Q8NHU6 1098 aaKnown RBP27.13■■□□□ 1.93
FAAP20-209ENST00000428120 C8orf76Q96K31 380 aa27.13■■□□□ 1.93
FAAP20-209ENST00000428120 BRIP1Q9BX63 1249 aa27.13■■□□□ 1.93
FAAP20-209ENST00000428120 SLC12A7Q9Y666 1083 aa27.13■■□□□ 1.93
FAAP20-209ENST00000428120 CCDC69A6NI79 296 aa27.12■■□□□ 1.93
FAAP20-209ENST00000428120 LIFRP42702 1097 aa27.12■■□□□ 1.93
FAAP20-209ENST00000428120 GRIK5Q16478 980 aa27.12■■□□□ 1.93
FAAP20-209ENST00000428120 PHKBQ93100 1093 aa27.12■■□□□ 1.93
FAAP20-209ENST00000428120 PRDM1O75626 825 aa27.12■■□□□ 1.93
FAAP20-209ENST00000428120 AIFM3Q96NN9 605 aa27.12■■□□□ 1.93
FAAP20-209ENST00000428120 GOLGA8AA7E2F4 631 aa27.11■■□□□ 1.93
FAAP20-209ENST00000428120 GGA1Q9UJY5 639 aa27.11■■□□□ 1.93
FAAP20-209ENST00000428120 USP17L12C9JPN9 530 aa27.11■■□□□ 1.93
FAAP20-209ENST00000428120 USP17L21D6R901 530 aa27.11■■□□□ 1.93
FAAP20-209ENST00000428120 RXRBP28702 533 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms